RNA–Protein interactions for RNA: ENST00000492449.5

VPS8-225, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 1 (best)

Gene VPS8, Length 2,980 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-225ENST00000492449 SORL1Q92673 2214 aa6.51□□□□□ -1.37
VPS8-225ENST00000492449 C10orf99Q6UWK7 81 aa6.51□□□□□ -1.37
VPS8-225ENST00000492449 UBE2E2Q96LR5 201 aa6.51□□□□□ -1.37
VPS8-225ENST00000492449 LIMD2Q9BT23 127 aa6.51□□□□□ -1.37
VPS8-225ENST00000492449 NDUFB1O75438 58 aa6.51□□□□□ -1.37
VPS8-225ENST00000492449 ETDCA0A1B0GVM5 59 aa6.5□□□□□ -1.37
VPS8-225ENST00000492449 ABCA2Q9BZC7 2435 aa6.49□□□□□ -1.37
VPS8-225ENST00000492449 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.49□□□□□ -1.37
VPS8-225ENST00000492449 HIGD2BQ4VC39 106 aa6.49□□□□□ -1.37
VPS8-225ENST00000492449 C10orf25Q5T742 122 aa6.49□□□□□ -1.37
VPS8-225ENST00000492449 PRB1P04280 392 aa6.48□□□□□ -1.37
VPS8-225ENST00000492449 NOP10Q9NPE3 64 aaKnown RBP6.48□□□□□ -1.37
VPS8-225ENST00000492449 C9orf116Q5BN46 136 aaPredicted RBP6.48□□□□□ -1.37
VPS8-225ENST00000492449 Q8N9P0 234 aaPredicted RBP6.48□□□□□ -1.37
VPS8-225ENST00000492449 A0A0J9YWU9 116 aa6.47□□□□□ -1.37
VPS8-225ENST00000492449 A0A1W2PPR1 153 aa6.47□□□□□ -1.37
VPS8-225ENST00000492449 ZNF73O43830 326 aaPredicted RBP6.47□□□□□ -1.37
VPS8-225ENST00000492449 APOC4P55056 127 aa6.47□□□□□ -1.37
VPS8-225ENST00000492449 Q75L30 129 aa6.47□□□□□ -1.37
VPS8-225ENST00000492449 C16orf74Q96GX8 76 aa6.47□□□□□ -1.37
VPS8-225ENST00000492449 Q9BRP9 147 aa6.46□□□□□ -1.37
VPS8-225ENST00000492449 IGSF10Q6WRI0 2623 aa6.46□□□□□ -1.38
VPS8-225ENST00000492449 HCG22E2RYF7 251 aa6.46□□□□□ -1.38
VPS8-225ENST00000492449 CHKB-CPT1BH3BT56 60 aa6.46□□□□□ -1.38
VPS8-225ENST00000492449 KLK12Q9UKR0 248 aa6.46□□□□□ -1.38
VPS8-225ENST00000492449 SLURP1P55000 103 aa6.45□□□□□ -1.38
VPS8-225ENST00000492449 ADORA2A-AS1P86434 159 aa6.45□□□□□ -1.38
VPS8-225ENST00000492449 CHD6Q8TD26 2715 aa6.45□□□□□ -1.38
VPS8-225ENST00000492449 C7orf65Q6ZTY9 151 aa6.45□□□□□ -1.38
VPS8-225ENST00000492449 LCA10Q71F78 164 aa6.45□□□□□ -1.38
VPS8-225ENST00000492449 SPANXA2-OT1Q8N9U9 137 aa6.45□□□□□ -1.38
VPS8-225ENST00000492449 AKAP6Q13023 2319 aa6.45□□□□□ -1.38
VPS8-225ENST00000492449 LOC101927531A0A1B0GV80 90 aa6.44□□□□□ -1.38
VPS8-225ENST00000492449 ODF3L2Q3SX64 289 aa6.44□□□□□ -1.38
VPS8-225ENST00000492449 B9D2Q9BPU9 175 aa6.44□□□□□ -1.38
VPS8-225ENST00000492449 GVQW2A0A096LPI5 108 aaPredicted RBP6.44□□□□□ -1.38
VPS8-225ENST00000492449 LINC00528Q8N1L1 170 aa6.44□□□□□ -1.38
VPS8-225ENST00000492449 C11orf45Q8TAV5 145 aa6.44□□□□□ -1.38
VPS8-225ENST00000492449 CFAP46Q8IYW2 2715 aa6.43□□□□□ -1.38
VPS8-225ENST00000492449 IGLV5-48A0A075B6I7 105 aa6.43□□□□□ -1.38
VPS8-225ENST00000492449 HIVEP3Q5T1R4 2406 aa6.43□□□□□ -1.38
VPS8-225ENST00000492449 CR1P17927 2039 aa6.43□□□□□ -1.38
VPS8-225ENST00000492449 VPREB1P12018 145 aa6.42□□□□□ -1.38
VPS8-225ENST00000492449 CHCHD10Q8WYQ3 142 aaPredicted RBP6.42□□□□□ -1.38
VPS8-225ENST00000492449 KCNQ1DNQ9H478 68 aa6.42□□□□□ -1.38
VPS8-225ENST00000492449 CDC42SE1Q9NRR8 79 aa6.42□□□□□ -1.38
VPS8-225ENST00000492449 ASH1LQ9NR48 2969 aaKnown RBP6.42□□□□□ -1.38
VPS8-225ENST00000492449 C3orf84H3BNL1 204 aa6.42□□□□□ -1.38
VPS8-225ENST00000492449 ST20-AS1Q8NBB2 130 aa6.42□□□□□ -1.38
VPS8-225ENST00000492449 SPTAN1Q13813 2472 aaKnown RBP6.41□□□□□ -1.38
VPS8-225ENST00000492449 CELSR1Q9NYQ6 3014 aa6.41□□□□□ -1.38
VPS8-225ENST00000492449 C8orf87E5RJ46 101 aa6.4□□□□□ -1.38
VPS8-225ENST00000492449 UNQ6190/PRO20217Q6UXQ8 127 aa6.4□□□□□ -1.38
VPS8-225ENST00000492449 CSNK1G2-AS1Q8NCQ2 148 aa6.4□□□□□ -1.38
VPS8-225ENST00000492449 SPTSSBQ8NFR3 76 aa6.4□□□□□ -1.38
VPS8-225ENST00000492449 LINC00208Q96KT6 92 aa6.4□□□□□ -1.38
VPS8-225ENST00000492449 PRR15LQ9BU68 103 aa6.4□□□□□ -1.38
VPS8-225ENST00000492449 GIG44P09565 113 aaPredicted RBP6.4□□□□□ -1.39
VPS8-225ENST00000492449 DSCR10P59022 87 aa6.39□□□□□ -1.39
VPS8-225ENST00000492449 CLPSL2Q6UWE3 100 aa6.39□□□□□ -1.39
VPS8-225ENST00000492449 PRR4Q16378 134 aa6.39□□□□□ -1.39
VPS8-225ENST00000492449 KPRPQ5T749 579 aaPredicted RBP6.39□□□□□ -1.39
VPS8-225ENST00000492449 ZNF702PQ9H963 129 aa6.39□□□□□ -1.39
VPS8-225ENST00000492449 SPAG11BQ08648 103 aa6.38□□□□□ -1.39
VPS8-225ENST00000492449 DEFB136Q30KP8 78 aa6.38□□□□□ -1.39
VPS8-225ENST00000492449 C18orf65Q6ZTR6 163 aa6.38□□□□□ -1.39
VPS8-225ENST00000492449 C4orf3Q8WVX3 66 aa6.38□□□□□ -1.39
VPS8-225ENST00000492449 CYSRT1A8MQ03 144 aa6.38□□□□□ -1.39
VPS8-225ENST00000492449 H3BPC8 53 aa6.38□□□□□ -1.39
VPS8-225ENST00000492449 DSCR9P59020 149 aa6.38□□□□□ -1.39
VPS8-225ENST00000492449 UTP20O75691 2785 aaKnown RBP6.37□□□□□ -1.39
VPS8-225ENST00000492449 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.37□□□□□ -1.39
VPS8-225ENST00000492449 MSMBP08118 114 aa6.37□□□□□ -1.39
VPS8-225ENST00000492449 SPRR4Q96PI1 79 aa6.37□□□□□ -1.39
VPS8-225ENST00000492449 KMT2BQ9UMN6 2715 aaPredicted RBP6.37□□□□□ -1.39
VPS8-225ENST00000492449 DEFB112Q30KQ8 113 aa6.36□□□□□ -1.39
VPS8-225ENST00000492449 A6NED7 52 aa6.36□□□□□ -1.39
VPS8-225ENST00000492449 REG3AQ06141 175 aa6.36□□□□□ -1.39
VPS8-225ENST00000492449 A0A1W2PNM2 257 aa6.36□□□□□ -1.39
VPS8-225ENST00000492449 MP68P56378 58 aa6.36□□□□□ -1.39
VPS8-225ENST00000492449 KHDC1LQ5JSQ8 128 aa6.36□□□□□ -1.39
VPS8-225ENST00000492449 K7EQZ3 153 aa6.35□□□□□ -1.39
VPS8-225ENST00000492449 GYPEP15421 78 aa6.35□□□□□ -1.39
VPS8-225ENST00000492449 WNK1Q9H4A3 2382 aa6.35□□□□□ -1.39
VPS8-225ENST00000492449 TNP2Q05952 138 aa6.35□□□□□ -1.39
VPS8-225ENST00000492449 Q8N377 158 aa6.35□□□□□ -1.39
VPS8-225ENST00000492449 FLNCQ14315 2725 aa6.34□□□□□ -1.39
VPS8-225ENST00000492449 MOBPQ13875 183 aa6.34□□□□□ -1.39
VPS8-225ENST00000492449 ZNF462Q96JM2 2506 aa6.34□□□□□ -1.39
VPS8-225ENST00000492449 CMC4P56277 68 aaPredicted RBP6.34□□□□□ -1.39
VPS8-225ENST00000492449 Q8NBF4 154 aa6.34□□□□□ -1.39
VPS8-225ENST00000492449 PLAC8Q9NZF1 115 aa6.34□□□□□ -1.39
VPS8-225ENST00000492449 C6orf48Q9UBA6 75 aa6.34□□□□□ -1.39
VPS8-225ENST00000492449 IGLV10-54A0A075B6I4 117 aa6.33□□□□□ -1.4
VPS8-225ENST00000492449 SPG11Q96JI7 2443 aa6.32□□□□□ -1.4
VPS8-225ENST00000492449 MAP1AP78559 2803 aaPredicted RBP6.32□□□□□ -1.4
VPS8-225ENST00000492449 FAM208BQ5VWN6 2430 aa6.31□□□□□ -1.4
VPS8-225ENST00000492449 ANGP03950 147 aaKnown RBP6.31□□□□□ -1.4
VPS8-225ENST00000492449 C9orf163Q8N9P6 203 aa6.31□□□□□ -1.4
VPS8-225ENST00000492449 VPS13CQ709C8 3753 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms