RNA–Protein interactions for RNA: ENST00000491860.1

NUP50-217, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-217ENST00000491860 TRAV12-1A0A0B4J245 112 aa5.14□□□□□ -1.59
NUP50-217ENST00000491860 ATP6V1G1O75348 118 aa5.14□□□□□ -1.59
NUP50-217ENST00000491860 LINC00304Q8N9R0 145 aa5.14□□□□□ -1.59
NUP50-217ENST00000491860 CHTOPQ9Y3Y2 248 aaKnown RBP5.14□□□□□ -1.59
NUP50-217ENST00000491860 ZNF706Q9Y5V0 76 aaPredicted RBP5.14□□□□□ -1.59
NUP50-217ENST00000491860 C11orf86A6NJI1 115 aa5.13□□□□□ -1.59
NUP50-217ENST00000491860 APOC3P02656 99 aa5.13□□□□□ -1.59
NUP50-217ENST00000491860 LINC00158P58513 81 aa5.13□□□□□ -1.59
NUP50-217ENST00000491860 HERV-K104P63124 156 aa5.13□□□□□ -1.59
NUP50-217ENST00000491860 S100A12P80511 92 aa5.13□□□□□ -1.59
NUP50-217ENST00000491860 URB1-AS1Q96HZ7 61 aa5.13□□□□□ -1.59
NUP50-217ENST00000491860 ZNF625Q96I27 306 aaPredicted RBP5.13□□□□□ -1.59
NUP50-217ENST00000491860 M0R378 163 aa5.12□□□□□ -1.59
NUP50-217ENST00000491860 PRLHP81277 87 aa5.12□□□□□ -1.59
NUP50-217ENST00000491860 SPAG11AQ6PDA7 123 aa5.12□□□□□ -1.59
NUP50-217ENST00000491860 CBLN2Q8IUK8 224 aa5.12□□□□□ -1.59
NUP50-217ENST00000491860 IFI27L1Q96BM0 104 aa5.12□□□□□ -1.59
NUP50-217ENST00000491860 MAP1LC3CQ9BXW4 147 aa5.12□□□□□ -1.59
NUP50-217ENST00000491860 TMEM223A0PJW6 202 aa5.11□□□□□ -1.59
NUP50-217ENST00000491860 PMCHL1Q16048 86 aa5.11□□□□□ -1.59
NUP50-217ENST00000491860 KRTAP13-2Q52LG2 175 aa5.11□□□□□ -1.59
NUP50-217ENST00000491860 TMEM238C9JI98 176 aa5.1□□□□□ -1.59
NUP50-217ENST00000491860 PRYO14603 147 aa5.1□□□□□ -1.59
NUP50-217ENST00000491860 HSBP1O75506 76 aa5.1□□□□□ -1.59
NUP50-217ENST00000491860 SCO1O75880 301 aa5.1□□□□□ -1.59
NUP50-217ENST00000491860 MEIG1Q5JSS6 88 aa5.1□□□□□ -1.59
NUP50-217ENST00000491860 PLEKHB2Q96CS7 222 aa5.1□□□□□ -1.59
NUP50-217ENST00000491860 ANAPC11Q9NYG5 84 aa5.1□□□□□ -1.59
NUP50-217ENST00000491860 MYMXA0A1B0GTQ4 84 aa5.09□□□□□ -1.59
NUP50-217ENST00000491860 TPRXLQ17RH7 258 aa5.09□□□□□ -1.59
NUP50-217ENST00000491860 C4orf48Q5BLP8 95 aa5.09□□□□□ -1.59
NUP50-217ENST00000491860 LINC00337Q8N6G1 96 aa5.09□□□□□ -1.59
NUP50-217ENST00000491860 HIGD2AQ9BW72 106 aa5.09□□□□□ -1.59
NUP50-217ENST00000491860 KCNQ1DNQ9H478 68 aa5.09□□□□□ -1.59
NUP50-217ENST00000491860 BOD1L2Q8IYS8 172 aa5.08□□□□□ -1.6
NUP50-217ENST00000491860 CDIP1Q9H305 208 aa5.08□□□□□ -1.6
NUP50-217ENST00000491860 IGLV7-46A0A075B6I9 117 aa5.07□□□□□ -1.6
NUP50-217ENST00000491860 ETDCA0A1B0GVM5 59 aa5.07□□□□□ -1.6
NUP50-217ENST00000491860 SMIM13P0DJ93 91 aa5.07□□□□□ -1.6
NUP50-217ENST00000491860 PLNP26678 52 aa5.07□□□□□ -1.6
NUP50-217ENST00000491860 FP248Q71RG6 208 aaPredicted RBP5.07□□□□□ -1.6
NUP50-217ENST00000491860 SPRR4Q96PI1 79 aa5.07□□□□□ -1.6
NUP50-217ENST00000491860 NDUFA12Q9UI09 145 aa5.07□□□□□ -1.6
NUP50-217ENST00000491860 A0A0U1RRA0 63 aa5.06□□□□□ -1.6
NUP50-217ENST00000491860 SPRR1AP35321 89 aa5.06□□□□□ -1.6
NUP50-217ENST00000491860 NMUP48645 174 aa5.06□□□□□ -1.6
NUP50-217ENST00000491860 HERVK_113P61574 105 aa5.06□□□□□ -1.6
NUP50-217ENST00000491860 MIR7-3HGQ8N6C7 128 aa5.06□□□□□ -1.6
NUP50-217ENST00000491860 LOC107984156A0A0G2JMH3 177 aa5.05□□□□□ -1.6
NUP50-217ENST00000491860 TRBV10-2A0A0K0K1G8 114 aa5.05□□□□□ -1.6
NUP50-217ENST00000491860 LEPROTL1O95214 131 aa5.05□□□□□ -1.6
NUP50-217ENST00000491860 ARL17AQ8IVW1 177 aa5.05□□□□□ -1.6
NUP50-217ENST00000491860 Q8NDZ9 215 aa5.05□□□□□ -1.6
NUP50-217ENST00000491860 YPEL4Q96NS1 127 aa5.05□□□□□ -1.6
NUP50-217ENST00000491860 MIEN1Q9BRT3 115 aa5.05□□□□□ -1.6
NUP50-217ENST00000491860 HSPB8Q9UJY1 196 aa5.05□□□□□ -1.6
NUP50-217ENST00000491860 CBY1Q9Y3M2 126 aa5.05□□□□□ -1.6
NUP50-217ENST00000491860 NCR3O14931 201 aa5.04□□□□□ -1.6
NUP50-217ENST00000491860 LEPROTO15243 131 aa5.04□□□□□ -1.6
NUP50-217ENST00000491860 SPINK1P00995 79 aa5.04□□□□□ -1.6
NUP50-217ENST00000491860 C3orf22Q8N5N4 141 aa5.04□□□□□ -1.6
NUP50-217ENST00000491860 RETNLBQ9BQ08 111 aa5.04□□□□□ -1.6
NUP50-217ENST00000491860 RPS29P62273 56 aaKnown RBP5.03□□□□□ -1.6
NUP50-217ENST00000491860 JOSD1Q15040 202 aaPredicted RBP5.03□□□□□ -1.6
NUP50-217ENST00000491860 FAM19A2Q8N3H0 131 aa5.03□□□□□ -1.6
NUP50-217ENST00000491860 SMCR5Q8TEV8 140 aa5.03□□□□□ -1.6
NUP50-217ENST00000491860 PPDPFQ9H3Y8 114 aa5.03□□□□□ -1.6
NUP50-217ENST00000491860 SPANXB1Q9NS25 103 aaPredicted RBP5.03□□□□□ -1.6
NUP50-217ENST00000491860 TRBV10-3A0A0K0K1G6 114 aa5.02□□□□□ -1.61
NUP50-217ENST00000491860 KRTAP4-16G5E9R7 235 aaPredicted RBP5.02□□□□□ -1.61
NUP50-217ENST00000491860 H0Y8G0 127 aa5.02□□□□□ -1.61
NUP50-217ENST00000491860 DPM2O94777 84 aa5.02□□□□□ -1.61
NUP50-217ENST00000491860 NDUFC2O95298 119 aa5.02□□□□□ -1.61
NUP50-217ENST00000491860 LGALS3P17931 250 aaKnown RBP5.02□□□□□ -1.61
NUP50-217ENST00000491860 DDTP30046 118 aa5.02□□□□□ -1.61
NUP50-217ENST00000491860 LINC00483Q53H64 154 aa5.02□□□□□ -1.61
NUP50-217ENST00000491860 MUC17Q685J3 4493 aa5.02□□□□□ -1.61
NUP50-217ENST00000491860 B5MCH6 92 aa5.01□□□□□ -1.61
NUP50-217ENST00000491860 J3QQQ9 107 aa5.01□□□□□ -1.61
NUP50-217ENST00000491860 TRGC2P03986 189 aa5.01□□□□□ -1.61
NUP50-217ENST00000491860 S100A7L2Q5SY68 101 aa5.01□□□□□ -1.61
NUP50-217ENST00000491860 SSBP3-AS1Q7Z2R9 100 aa5.01□□□□□ -1.61
NUP50-217ENST00000491860 Q8NBF4 154 aa5.01□□□□□ -1.61
NUP50-217ENST00000491860 C5orf52A6NGY3 159 aa5□□□□□ -1.61
NUP50-217ENST00000491860 SERF1AO75920 110 aa5□□□□□ -1.61
NUP50-217ENST00000491860 IGKCP01834 107 aa5□□□□□ -1.61
NUP50-217ENST00000491860 HINT1P49773 126 aaPredicted RBP5□□□□□ -1.61
NUP50-217ENST00000491860 Q6ZRX8 168 aa5□□□□□ -1.61
NUP50-217ENST00000491860 GAGE2AQ6NT46 116 aa4.99□□□□□ -1.61
NUP50-217ENST00000491860 TRAV23DV6A0A075B6W5 121 aa4.98□□□□□ -1.61
NUP50-217ENST00000491860 IGLV6-57P01721 117 aa4.98□□□□□ -1.61
NUP50-217ENST00000491860 SLC25A20O43772 301 aa4.97□□□□□ -1.61
NUP50-217ENST00000491860 FABP4P15090 132 aa4.97□□□□□ -1.61
NUP50-217ENST00000491860 TSPEAR-AS2P59090 65 aa4.97□□□□□ -1.61
NUP50-217ENST00000491860 LCE2DQ5TA82 110 aaPredicted RBP4.97□□□□□ -1.61
NUP50-217ENST00000491860 SLC25A34Q6PIV7 304 aa4.97□□□□□ -1.61
NUP50-217ENST00000491860 DAND5Q8N907 189 aa4.97□□□□□ -1.61
NUP50-217ENST00000491860 IGLV9-49A0A0B4J1Y8 123 aa4.96□□□□□ -1.62
NUP50-217ENST00000491860 E9PLD3 99 aa4.96□□□□□ -1.62
NUP50-217ENST00000491860 LINC00310P59036 64 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms