RNA–Protein interactions for RNA: ENST00000491128.5

SMPD4-219, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 2,570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-219ENST00000491128 CDIP1Q9H305 208 aa9.15□□□□□ -0.94
SMPD4-219ENST00000491128 NBDYA0A0U1RRE5 68 aa9.15□□□□□ -0.95
SMPD4-219ENST00000491128 SMCPP49901 116 aaPredicted RBP9.15□□□□□ -0.95
SMPD4-219ENST00000491128 IGKV2-28A0A075B6P5 120 aa9.14□□□□□ -0.95
SMPD4-219ENST00000491128 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.14□□□□□ -0.95
SMPD4-219ENST00000491128 IGKV2D-28P01615 120 aa9.14□□□□□ -0.95
SMPD4-219ENST00000491128 GAGE2EQ4V326 116 aa9.14□□□□□ -0.95
SMPD4-219ENST00000491128 GAGE2DQ9UEU5 116 aa9.14□□□□□ -0.95
SMPD4-219ENST00000491128 LY6G6CO95867 125 aa9.13□□□□□ -0.95
SMPD4-219ENST00000491128 RPL13AP40429 203 aaKnown RBP9.13□□□□□ -0.95
SMPD4-219ENST00000491128 A0A0B4J2C4 111 aa9.13□□□□□ -0.95
SMPD4-219ENST00000491128 GVQW2A0A096LPI5 108 aaPredicted RBP9.12□□□□□ -0.95
SMPD4-219ENST00000491128 LINC00337Q8N6G1 96 aa9.12□□□□□ -0.95
SMPD4-219ENST00000491128 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.12□□□□□ -0.95
SMPD4-219ENST00000491128 PSMB2P49721 201 aa9.12□□□□□ -0.95
SMPD4-219ENST00000491128 RMI2Q96E14 147 aa9.12□□□□□ -0.95
SMPD4-219ENST00000491128 FUSP35637 526 aaKnown RBP eCLIP9.11□□□□□ -0.95
SMPD4-219ENST00000491128 SYCNQ0VAF6 134 aa9.11□□□□□ -0.95
SMPD4-219ENST00000491128 WWC2-AS2Q96NR7 200 aa9.11□□□□□ -0.95
SMPD4-219ENST00000491128 MT-ATP8P03928 68 aa9.11□□□□□ -0.95
SMPD4-219ENST00000491128 HYDINQ4G0P3 5121 aa9.11□□□□□ -0.95
SMPD4-219ENST00000491128 NCR3O14931 201 aa9.1□□□□□ -0.95
SMPD4-219ENST00000491128 Q6ZRP5 223 aa9.1□□□□□ -0.95
SMPD4-219ENST00000491128 SCGB1C2P0DMR2 95 aa9.09□□□□□ -0.95
SMPD4-219ENST00000491128 COX17Q14061 63 aa9.09□□□□□ -0.95
SMPD4-219ENST00000491128 OR13C6PQ8NH95 151 aa9.09□□□□□ -0.95
SMPD4-219ENST00000491128 LINC01620Q4KN68 170 aa9.09□□□□□ -0.95
SMPD4-219ENST00000491128 TRIAP1O43715 76 aa9.08□□□□□ -0.96
SMPD4-219ENST00000491128 XGP55808 180 aa9.08□□□□□ -0.96
SMPD4-219ENST00000491128 CARD19Q96LW7 228 aa9.08□□□□□ -0.96
SMPD4-219ENST00000491128 RPL18AQ02543 176 aaKnown RBP9.08□□□□□ -0.96
SMPD4-219ENST00000491128 C2orf48Q96LS8 159 aa9.08□□□□□ -0.96
SMPD4-219ENST00000491128 COPS9Q8WXC6 57 aa9.07□□□□□ -0.96
SMPD4-219ENST00000491128 TRBV30A0A0K0K1B3 111 aa9.06□□□□□ -0.96
SMPD4-219ENST00000491128 TCL1BO95988 128 aa9.05□□□□□ -0.96
SMPD4-219ENST00000491128 TTC32Q5I0X7 151 aa9.05□□□□□ -0.96
SMPD4-219ENST00000491128 CLEC2BQ92478 149 aa9.05□□□□□ -0.96
SMPD4-219ENST00000491128 NDUFC2-KCTD14E9PQ53 114 aa9.04□□□□□ -0.96
SMPD4-219ENST00000491128 Q6ZRN7 208 aaPredicted RBP9.04□□□□□ -0.96
SMPD4-219ENST00000491128 GAGE2BQ13066 116 aa9.04□□□□□ -0.96
SMPD4-219ENST00000491128 FAM168BA1KXE4 195 aa9.03□□□□□ -0.96
SMPD4-219ENST00000491128 C9orf129Q5T035 196 aaKnown RBP9.03□□□□□ -0.96
SMPD4-219ENST00000491128 PPDPFLQ8WWR9 84 aa9.03□□□□□ -0.96
SMPD4-219ENST00000491128 TEN1Q86WV5 123 aa9.02□□□□□ -0.97
SMPD4-219ENST00000491128 SMIM11BQ8TCY0 68 aa9.02□□□□□ -0.97
SMPD4-219ENST00000491128 LRCOL1A6NCL2 159 aa9.02□□□□□ -0.97
SMPD4-219ENST00000491128 TRAV13-2A0A0B4J235 113 aa9.01□□□□□ -0.97
SMPD4-219ENST00000491128 LINC00476Q8WZB0 136 aa9.01□□□□□ -0.97
SMPD4-219ENST00000491128 SS18L2Q9UHA2 77 aa9.01□□□□□ -0.97
SMPD4-219ENST00000491128 IGKV2-24A0A0C4DH68 120 aa9□□□□□ -0.97
SMPD4-219ENST00000491128 HECTD4Q9Y4D8 3996 aa9□□□□□ -0.97
SMPD4-219ENST00000491128 SERTAD4-AS1Q5TG53 156 aa9□□□□□ -0.97
SMPD4-219ENST00000491128 Q6ZR54 194 aa9□□□□□ -0.97
SMPD4-219ENST00000491128 ANAPC13Q9BS18 74 aa8.99□□□□□ -0.97
SMPD4-219ENST00000491128 S100A7L2Q5SY68 101 aa8.99□□□□□ -0.97
SMPD4-219ENST00000491128 ANKRD29Q8N6D5 301 aa8.99□□□□□ -0.97
SMPD4-219ENST00000491128 CHTF8P0CG12 524 aa8.97□□□□□ -0.97
SMPD4-219ENST00000491128 FAM218AQ96MZ4 157 aa8.97□□□□□ -0.97
SMPD4-219ENST00000491128 TRBV10-3A0A0K0K1G6 114 aa8.97□□□□□ -0.97
SMPD4-219ENST00000491128 NDUFC2O95298 119 aa8.97□□□□□ -0.97
SMPD4-219ENST00000491128 VPREB1P12018 145 aa8.97□□□□□ -0.97
SMPD4-219ENST00000491128 TRBV20-1A0A075B6N2 111 aa8.96□□□□□ -0.97
SMPD4-219ENST00000491128 LYRM7Q5U5X0 104 aa8.96□□□□□ -0.97
SMPD4-219ENST00000491128 PPDPFQ9H3Y8 114 aa8.96□□□□□ -0.97
SMPD4-219ENST00000491128 A0A096LNI7 61 aa8.95□□□□□ -0.98
SMPD4-219ENST00000491128 COX6CP09669 75 aa8.95□□□□□ -0.98
SMPD4-219ENST00000491128 FAM19A5Q7Z5A7 132 aaPredicted RBP8.95□□□□□ -0.98
SMPD4-219ENST00000491128 KRTAP7-1Q8IUC3 87 aa8.95□□□□□ -0.98
SMPD4-219ENST00000491128 RPL28P46779 137 aaKnown RBP8.94□□□□□ -0.98
SMPD4-219ENST00000491128 C1orf134Q5TEV5 83 aa8.94□□□□□ -0.98
SMPD4-219ENST00000491128 FRAS1Q86XX4 4008 aa8.94□□□□□ -0.98
SMPD4-219ENST00000491128 A0A087WTM6 91 aa8.94□□□□□ -0.98
SMPD4-219ENST00000491128 C3orf84H3BNL1 204 aa8.94□□□□□ -0.98
SMPD4-219ENST00000491128 TMEM126AQ9H061 195 aa8.94□□□□□ -0.98
SMPD4-219ENST00000491128 RPL37AP8A6NKH3 93 aa8.93□□□□□ -0.98
SMPD4-219ENST00000491128 B5MCH6 92 aa8.93□□□□□ -0.98
SMPD4-219ENST00000491128 C9JAW5 83 aa8.93□□□□□ -0.98
SMPD4-219ENST00000491128 F8WDY8 70 aa8.93□□□□□ -0.98
SMPD4-219ENST00000491128 Q8N814 137 aa8.93□□□□□ -0.98
SMPD4-219ENST00000491128 SACSQ9NZJ4 4579 aa8.93□□□□□ -0.98
SMPD4-219ENST00000491128 DNAH6Q9C0G6 4158 aa8.93□□□□□ -0.98
SMPD4-219ENST00000491128 ALMS1Q8TCU4 4167 aa8.93□□□□□ -0.98
SMPD4-219ENST00000491128 A0A087WYN8 130 aa8.93□□□□□ -0.98
SMPD4-219ENST00000491128 CNBPP62633 177 aaKnown RBP8.93□□□□□ -0.98
SMPD4-219ENST00000491128 C6orf99Q4VX62 202 aa8.93□□□□□ -0.98
SMPD4-219ENST00000491128 DNAH17Q9UFH2 4485 aa8.92□□□□□ -0.98
SMPD4-219ENST00000491128 LOC107984640A0A0U1RRK4 108 aa8.92□□□□□ -0.98
SMPD4-219ENST00000491128 SLC25A20O43772 301 aa8.92□□□□□ -0.98
SMPD4-219ENST00000491128 TLX1NBP0CAT3 122 aa8.92□□□□□ -0.98
SMPD4-219ENST00000491128 TNP2Q05952 138 aa8.92□□□□□ -0.98
SMPD4-219ENST00000491128 PANO1I0J062 215 aa8.91□□□□□ -0.98
SMPD4-219ENST00000491128 ATXN8Q156A1 80 aa8.91□□□□□ -0.98
SMPD4-219ENST00000491128 IGLV6-57P01721 117 aa8.91□□□□□ -0.98
SMPD4-219ENST00000491128 C14orf177Q52M58 125 aa8.9□□□□□ -0.98
SMPD4-219ENST00000491128 NKAPP1Q8N9T2 125 aa8.9□□□□□ -0.98
SMPD4-219ENST00000491128 KMT2CQ8NEZ4 4911 aaKnown RBP8.9□□□□□ -0.98
SMPD4-219ENST00000491128 A0A1W2PNN7 141 aa8.9□□□□□ -0.99
SMPD4-219ENST00000491128 M0QXV9 152 aa8.9□□□□□ -0.99
SMPD4-219ENST00000491128 LST1O00453 97 aa8.9□□□□□ -0.99
SMPD4-219ENST00000491128 C7orf33Q8WU49 177 aa8.9□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 179.3 ms