RNA–Protein interactions for RNA: ENST00000491028.1

MCF2L-230, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-230ENST00000491028 COPS9Q8WXC6 57 aa11.85□□□□□ -0.51
MCF2L-230ENST00000491028 PRO1933Q9H354 126 aa11.85□□□□□ -0.51
MCF2L-230ENST00000491028 IFITM1P13164 125 aa11.84□□□□□ -0.51
MCF2L-230ENST00000491028 LINC00308Q8TCZ7 52 aa11.84□□□□□ -0.51
MCF2L-230ENST00000491028 PPDPFQ9H3Y8 114 aa11.84□□□□□ -0.51
MCF2L-230ENST00000491028 PLA2G2DQ9UNK4 145 aa11.84□□□□□ -0.51
MCF2L-230ENST00000491028 TSTD3H0UI37 97 aa11.83□□□□□ -0.52
MCF2L-230ENST00000491028 SRSF9Q13242 221 aaKnown RBP eCLIP11.83□□□□□ -0.52
MCF2L-230ENST00000491028 FAM30AQ9NZY2 134 aa11.82□□□□□ -0.52
MCF2L-230ENST00000491028 PKHD1P08F94 4074 aa11.81□□□□□ -0.52
MCF2L-230ENST00000491028 SOSTDC1Q6X4U4 206 aa11.81□□□□□ -0.52
MCF2L-230ENST00000491028 DPH3Q96FX2 82 aa11.81□□□□□ -0.52
MCF2L-230ENST00000491028 KRTAP17-1Q9BYP8 105 aa11.81□□□□□ -0.52
MCF2L-230ENST00000491028 DYNC1H1Q14204 4646 aaKnown RBP11.81□□□□□ -0.52
MCF2L-230ENST00000491028 NPC2P61916 151 aa11.8□□□□□ -0.52
MCF2L-230ENST00000491028 RPL24P83731 157 aaKnown RBP11.8□□□□□ -0.52
MCF2L-230ENST00000491028 HIST1H4GQ99525 98 aa11.8□□□□□ -0.52
MCF2L-230ENST00000491028 A0A087WYN8 130 aa11.79□□□□□ -0.52
MCF2L-230ENST00000491028 HNRNPA3P51991 378 aaKnown RBP11.79□□□□□ -0.52
MCF2L-230ENST00000491028 TAL2Q16559 108 aa11.79□□□□□ -0.52
MCF2L-230ENST00000491028 PLAC8Q9NZF1 115 aa11.79□□□□□ -0.52
MCF2L-230ENST00000491028 IGLV5-37A0A075B6J1 123 aa11.78□□□□□ -0.52
MCF2L-230ENST00000491028 A0A1W2PNN7 141 aa11.78□□□□□ -0.52
MCF2L-230ENST00000491028 FAM168BA1KXE4 195 aa11.78□□□□□ -0.52
MCF2L-230ENST00000491028 EPM2AB3EWF7 344 aa11.78□□□□□ -0.52
MCF2L-230ENST00000491028 NDUFC2O95298 119 aa11.78□□□□□ -0.52
MCF2L-230ENST00000491028 VPREB1P12018 145 aa11.78□□□□□ -0.52
MCF2L-230ENST00000491028 FAM19A5Q7Z5A7 132 aaPredicted RBP11.78□□□□□ -0.52
MCF2L-230ENST00000491028 MUSTN1Q8IVN3 82 aa11.78□□□□□ -0.52
MCF2L-230ENST00000491028 EIF4EBP3O60516 100 aaPredicted RBP11.77□□□□□ -0.53
MCF2L-230ENST00000491028 SERTAD4-AS1Q5TG53 156 aa11.77□□□□□ -0.53
MCF2L-230ENST00000491028 DNAH8Q96JB1 4490 aa11.77□□□□□ -0.53
MCF2L-230ENST00000491028 LRP1BQ9NZR2 4599 aa11.76□□□□□ -0.53
MCF2L-230ENST00000491028 HSD52Q0P140 79 aa11.76□□□□□ -0.53
MCF2L-230ENST00000491028 SCXQ7RTU7 201 aa11.76□□□□□ -0.53
MCF2L-230ENST00000491028 CIRBP-AS1Q8TBR5 109 aa11.76□□□□□ -0.53
MCF2L-230ENST00000491028 KRTAP7-1Q8IUC3 87 aa11.75□□□□□ -0.53
MCF2L-230ENST00000491028 NKAPP1Q8N9T2 125 aa11.75□□□□□ -0.53
MCF2L-230ENST00000491028 Q8NDZ9 215 aa11.75□□□□□ -0.53
MCF2L-230ENST00000491028 M0QXV9 152 aa11.74□□□□□ -0.53
MCF2L-230ENST00000491028 C22orf24Q9Y442 160 aa11.73□□□□□ -0.53
MCF2L-230ENST00000491028 TRBV10-2A0A0K0K1G8 114 aa11.72□□□□□ -0.53
MCF2L-230ENST00000491028 CEND1Q8N111 149 aa11.72□□□□□ -0.53
MCF2L-230ENST00000491028 M0R378 163 aa11.71□□□□□ -0.53
MCF2L-230ENST00000491028 CDK2AP2O75956 126 aa11.71□□□□□ -0.53
MCF2L-230ENST00000491028 XGP55808 180 aa11.71□□□□□ -0.53
MCF2L-230ENST00000491028 LBHQ53QV2 105 aaPredicted RBP11.71□□□□□ -0.53
MCF2L-230ENST00000491028 MRPL55Q7Z7F7 128 aaKnown RBP11.71□□□□□ -0.53
MCF2L-230ENST00000491028 NCR3O14931 201 aa11.7□□□□□ -0.54
MCF2L-230ENST00000491028 A4D1N5 150 aa11.69□□□□□ -0.54
MCF2L-230ENST00000491028 TMEM238LA0A1B0GVL6 79 aa11.68□□□□□ -0.54
MCF2L-230ENST00000491028 A6NJY4 79 aa11.68□□□□□ -0.54
MCF2L-230ENST00000491028 DDTP30046 118 aa11.68□□□□□ -0.54
MCF2L-230ENST00000491028 PRR3P79522 188 aaKnown RBP11.68□□□□□ -0.54
MCF2L-230ENST00000491028 HAMPP81172 84 aa11.68□□□□□ -0.54
MCF2L-230ENST00000491028 PHF5AQ7RTV0 110 aaKnown RBP11.68□□□□□ -0.54
MCF2L-230ENST00000491028 C7orf33Q8WU49 177 aa11.68□□□□□ -0.54
MCF2L-230ENST00000491028 IGKV2-28A0A075B6P5 120 aa11.67□□□□□ -0.54
MCF2L-230ENST00000491028 IGKV2D-28P01615 120 aa11.67□□□□□ -0.54
MCF2L-230ENST00000491028 CTAG1AP78358 180 aa11.66□□□□□ -0.54
MCF2L-230ENST00000491028 LINC00167Q96N53 147 aa11.66□□□□□ -0.54
MCF2L-230ENST00000491028 FXYD2P54710 66 aa11.65□□□□□ -0.54
MCF2L-230ENST00000491028 APOBP04114 4563 aaKnown RBP11.65□□□□□ -0.54
MCF2L-230ENST00000491028 GAGE10A6NGK3 116 aa11.64□□□□□ -0.55
MCF2L-230ENST00000491028 M0R143 59 aa11.64□□□□□ -0.55
MCF2L-230ENST00000491028 UBE2BP63146 152 aa11.64□□□□□ -0.55
MCF2L-230ENST00000491028 TRAV13-2A0A0B4J235 113 aa11.63□□□□□ -0.55
MCF2L-230ENST00000491028 S100A7L2Q5SY68 101 aa11.63□□□□□ -0.55
MCF2L-230ENST00000491028 LINC00337Q8N6G1 96 aa11.63□□□□□ -0.55
MCF2L-230ENST00000491028 IGLV1-50A0A075B6I6 118 aa11.62□□□□□ -0.55
MCF2L-230ENST00000491028 IGLV6-57P01721 117 aa11.62□□□□□ -0.55
MCF2L-230ENST00000491028 TMEM126AQ9H061 195 aa11.62□□□□□ -0.55
MCF2L-230ENST00000491028 HERC2O95714 4834 aa11.61□□□□□ -0.55
MCF2L-230ENST00000491028 A0A0B4J2C4 111 aa11.61□□□□□ -0.55
MCF2L-230ENST00000491028 TRBV10-3A0A0K0K1G6 114 aa11.61□□□□□ -0.55
MCF2L-230ENST00000491028 BVES-AS1Q5T3Y7 98 aa11.61□□□□□ -0.55
MCF2L-230ENST00000491028 CBY1Q9Y3M2 126 aa11.61□□□□□ -0.55
MCF2L-230ENST00000491028 RPL37AP8A6NKH3 93 aa11.6□□□□□ -0.55
MCF2L-230ENST00000491028 CFC1BP0CG36 223 aa11.6□□□□□ -0.55
MCF2L-230ENST00000491028 CFC1P0CG37 223 aa11.6□□□□□ -0.55
MCF2L-230ENST00000491028 OR13C6PQ8NH95 151 aa11.6□□□□□ -0.55
MCF2L-230ENST00000491028 A6NDN8 102 aa11.59□□□□□ -0.55
MCF2L-230ENST00000491028 HINT1P49773 126 aaPredicted RBP11.59□□□□□ -0.55
MCF2L-230ENST00000491028 PRYO14603 147 aa11.58□□□□□ -0.56
MCF2L-230ENST00000491028 RAB37Q96AX2 223 aa11.58□□□□□ -0.56
MCF2L-230ENST00000491028 RYR1P21817 5038 aa11.57□□□□□ -0.56
MCF2L-230ENST00000491028 KRTAP11-1Q8IUC1 163 aa11.57□□□□□ -0.56
MCF2L-230ENST00000491028 KCNQ1DNQ9H478 68 aa11.57□□□□□ -0.56
MCF2L-230ENST00000491028 NHP2Q9NX24 153 aaKnown RBP11.57□□□□□ -0.56
MCF2L-230ENST00000491028 A0A1B0GWB2 263 aa11.56□□□□□ -0.56
MCF2L-230ENST00000491028 LINC00528Q8N1L1 170 aa11.56□□□□□ -0.56
MCF2L-230ENST00000491028 TRAV23DV6A0A075B6W5 121 aa11.55□□□□□ -0.56
MCF2L-230ENST00000491028 RPL13AP40429 203 aaKnown RBP11.55□□□□□ -0.56
MCF2L-230ENST00000491028 SMR3BP02814 79 aaPredicted RBP11.54□□□□□ -0.56
MCF2L-230ENST00000491028 REG3GQ6UW15 175 aa11.54□□□□□ -0.56
MCF2L-230ENST00000491028 PSORS1C2Q9UIG4 136 aa11.54□□□□□ -0.56
MCF2L-230ENST00000491028 KIAA1109Q2LD37 5005 aa11.53□□□□□ -0.56
MCF2L-230ENST00000491028 PCLOQ9Y6V0 5065 aa11.53□□□□□ -0.56
MCF2L-230ENST00000491028 PRO1854Q9UHT4 67 aa11.53□□□□□ -0.56
MCF2L-230ENST00000491028 PCP4L1A6NKN8 68 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 136.9 ms