RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 ERC2-IT1O76042 136 aa7.13□□□□□ -1.27
EXOSC3-207ENST00000490516 PPBPP02775 128 aa7.13□□□□□ -1.27
EXOSC3-207ENST00000490516 PRELID3AQ96N28 172 aa7.13□□□□□ -1.27
EXOSC3-207ENST00000490516 A0A1B0GW15 77 aa7.12□□□□□ -1.27
EXOSC3-207ENST00000490516 C9orf153Q5TBE3 101 aa7.12□□□□□ -1.27
EXOSC3-207ENST00000490516 TMEM136Q6ZRR5 245 aa7.12□□□□□ -1.27
EXOSC3-207ENST00000490516 ORMDL3Q8N138 153 aa7.12□□□□□ -1.27
EXOSC3-207ENST00000490516 F8W036 122 aa7.11□□□□□ -1.27
EXOSC3-207ENST00000490516 MRPL54Q6P161 138 aaKnown RBP7.11□□□□□ -1.27
EXOSC3-207ENST00000490516 KRTAP9-3Q9BYQ3 159 aa7.11□□□□□ -1.27
EXOSC3-207ENST00000490516 IGLV5-45A0A087WSX0 123 aa7.1□□□□□ -1.27
EXOSC3-207ENST00000490516 SMIM27A0A1W2PRY6 76 aa7.1□□□□□ -1.27
EXOSC3-207ENST00000490516 PRYO14603 147 aa7.1□□□□□ -1.27
EXOSC3-207ENST00000490516 MT1FP04733 61 aa7.1□□□□□ -1.27
EXOSC3-207ENST00000490516 SPRR1AP35321 89 aa7.1□□□□□ -1.27
EXOSC3-207ENST00000490516 LINC00846Q9NV44 126 aa7.1□□□□□ -1.27
EXOSC3-207ENST00000490516 ERG28Q9UKR5 140 aa7.1□□□□□ -1.27
EXOSC3-207ENST00000490516 ETDCA0A1B0GVM5 59 aa7.09□□□□□ -1.27
EXOSC3-207ENST00000490516 TINCRA0A1B0GVN0 87 aa7.09□□□□□ -1.27
EXOSC3-207ENST00000490516 PRSS47A8MTI9 375 aa7.09□□□□□ -1.27
EXOSC3-207ENST00000490516 KRTAP19-6Q3LI70 58 aa7.09□□□□□ -1.27
EXOSC3-207ENST00000490516 PAPPA-AS1Q5QFB9 102 aa7.08□□□□□ -1.28
EXOSC3-207ENST00000490516 HRCT1Q6UXD1 115 aa7.08□□□□□ -1.28
EXOSC3-207ENST00000490516 Q8N8P6 123 aa7.08□□□□□ -1.28
EXOSC3-207ENST00000490516 ZNF625Q96I27 306 aaPredicted RBP7.08□□□□□ -1.28
EXOSC3-207ENST00000490516 A0A1B0GXF2 115 aa7.07□□□□□ -1.28
EXOSC3-207ENST00000490516 ORMDL2Q53FV1 153 aa7.07□□□□□ -1.28
EXOSC3-207ENST00000490516 LIMD2Q9BT23 127 aa7.07□□□□□ -1.28
EXOSC3-207ENST00000490516 S100A8P05109 93 aa7.06□□□□□ -1.28
EXOSC3-207ENST00000490516 KRTAP20-1Q3LI63 56 aa7.06□□□□□ -1.28
EXOSC3-207ENST00000490516 KCNQ1DNQ9H478 68 aa7.06□□□□□ -1.28
EXOSC3-207ENST00000490516 MAP1LC3AQ9H492 121 aa7.06□□□□□ -1.28
EXOSC3-207ENST00000490516 COX17Q14061 63 aa7.05□□□□□ -1.28
EXOSC3-207ENST00000490516 B5MCH6 92 aa7.03□□□□□ -1.28
EXOSC3-207ENST00000490516 NCR3O14931 201 aa7.03□□□□□ -1.28
EXOSC3-207ENST00000490516 Q9BRP9 147 aa7.03□□□□□ -1.28
EXOSC3-207ENST00000490516 KRTAP10-10P60014 251 aa7.02□□□□□ -1.29
EXOSC3-207ENST00000490516 RPL23P62829 140 aaKnown RBP7.02□□□□□ -1.29
EXOSC3-207ENST00000490516 CHTOPQ9Y3Y2 248 aaKnown RBP7.02□□□□□ -1.29
EXOSC3-207ENST00000490516 ADCYAP1P18509 176 aa7.01□□□□□ -1.29
EXOSC3-207ENST00000490516 KIAA1644Q3SXP7 199 aa7.01□□□□□ -1.29
EXOSC3-207ENST00000490516 TOMM6Q96B49 74 aa7.01□□□□□ -1.29
EXOSC3-207ENST00000490516 LAMTOR2Q9Y2Q5 125 aa7.01□□□□□ -1.29
EXOSC3-207ENST00000490516 IGLV5-39A0A0G2JS06 123 aa7□□□□□ -1.29
EXOSC3-207ENST00000490516 ADIRFQ15847 76 aa7□□□□□ -1.29
EXOSC3-207ENST00000490516 MRPL18Q9H0U6 180 aaKnown RBP7□□□□□ -1.29
EXOSC3-207ENST00000490516 TRBV10-3A0A0K0K1G6 114 aa6.99□□□□□ -1.29
EXOSC3-207ENST00000490516 H3BRM9 83 aa6.99□□□□□ -1.29
EXOSC3-207ENST00000490516 SRP19P09132 144 aaKnown RBP6.99□□□□□ -1.29
EXOSC3-207ENST00000490516 ERASQ7Z444 233 aa6.99□□□□□ -1.29
EXOSC3-207ENST00000490516 SCGB3A1Q96QR1 104 aa6.99□□□□□ -1.29
EXOSC3-207ENST00000490516 CST9LQ9H4G1 147 aa6.99□□□□□ -1.29
EXOSC3-207ENST00000490516 TRAV9-1A0A075B6T8 112 aa6.98□□□□□ -1.29
EXOSC3-207ENST00000490516 A0A0U1RRA0 63 aa6.98□□□□□ -1.29
EXOSC3-207ENST00000490516 K7EMI3 77 aa6.98□□□□□ -1.29
EXOSC3-207ENST00000490516 LINC00158P58513 81 aa6.98□□□□□ -1.29
EXOSC3-207ENST00000490516 BOD1L2Q8IYS8 172 aa6.96□□□□□ -1.3
EXOSC3-207ENST00000490516 ST20-AS1Q8NBB2 130 aa6.96□□□□□ -1.3
EXOSC3-207ENST00000490516 C20orf202A1L168 122 aa6.95□□□□□ -1.3
EXOSC3-207ENST00000490516 Q6ZRX8 168 aa6.95□□□□□ -1.3
EXOSC3-207ENST00000490516 SLC51BQ86UW2 128 aa6.95□□□□□ -1.3
EXOSC3-207ENST00000490516 NXT2Q9NPJ8 142 aaKnown RBP6.95□□□□□ -1.3
EXOSC3-207ENST00000490516 H7C2G1 150 aa6.94□□□□□ -1.3
EXOSC3-207ENST00000490516 G0S2P27469 103 aa6.94□□□□□ -1.3
EXOSC3-207ENST00000490516 BLOC1S1P78537 153 aa6.94□□□□□ -1.3
EXOSC3-207ENST00000490516 PMVKQ15126 192 aa6.94□□□□□ -1.3
EXOSC3-207ENST00000490516 C1orf195Q5TG92 126 aa6.94□□□□□ -1.3
EXOSC3-207ENST00000490516 MUC12Q9UKN1 5478 aa6.93□□□□□ -1.3
EXOSC3-207ENST00000490516 ATP5L2Q7Z4Y8 100 aa6.93□□□□□ -1.3
EXOSC3-207ENST00000490516 ZNF22P17026 224 aaPredicted RBP6.91□□□□□ -1.3
EXOSC3-207ENST00000490516 S100A12P80511 92 aa6.91□□□□□ -1.3
EXOSC3-207ENST00000490516 ALKAL2Q6UX46 152 aa6.91□□□□□ -1.3
EXOSC3-207ENST00000490516 NAT8Q9UHE5 227 aa6.91□□□□□ -1.3
EXOSC3-207ENST00000490516 IGLC3P0DOY3 106 aa6.9□□□□□ -1.3
EXOSC3-207ENST00000490516 ATP11AUNQ6ZP68 121 aa6.89□□□□□ -1.31
EXOSC3-207ENST00000490516 SMIM13P0DJ93 91 aa6.88□□□□□ -1.31
EXOSC3-207ENST00000490516 GHRHP01286 108 aa6.87□□□□□ -1.31
EXOSC3-207ENST00000490516 RGS21Q2M5E4 152 aa6.87□□□□□ -1.31
EXOSC3-207ENST00000490516 SFTA2Q6UW10 78 aa6.87□□□□□ -1.31
EXOSC3-207ENST00000490516 C9JQL5 133 aa6.86□□□□□ -1.31
EXOSC3-207ENST00000490516 ATP6V1G1O75348 118 aa6.86□□□□□ -1.31
EXOSC3-207ENST00000490516 DDTP30046 118 aa6.86□□□□□ -1.31
EXOSC3-207ENST00000490516 CD164Q04900 197 aa6.86□□□□□ -1.31
EXOSC3-207ENST00000490516 SMIM29Q86T20 159 aa6.86□□□□□ -1.31
EXOSC3-207ENST00000490516 MIR7-3HGQ8N6C7 128 aa6.86□□□□□ -1.31
EXOSC3-207ENST00000490516 LGALS3P17931 250 aaKnown RBP6.85□□□□□ -1.31
EXOSC3-207ENST00000490516 Q5XG85 94 aa6.85□□□□□ -1.31
EXOSC3-207ENST00000490516 JOSD1Q15040 202 aaPredicted RBP6.84□□□□□ -1.31
EXOSC3-207ENST00000490516 SPRR1BP22528 89 aa6.83□□□□□ -1.32
EXOSC3-207ENST00000490516 NDUFA6P56556 154 aa6.83□□□□□ -1.32
EXOSC3-207ENST00000490516 TRBV20-1A0A075B6N2 111 aa6.81□□□□□ -1.32
EXOSC3-207ENST00000490516 LINC01549A6NIU2 74 aa6.81□□□□□ -1.32
EXOSC3-207ENST00000490516 SLC25A34Q6PIV7 304 aa6.81□□□□□ -1.32
EXOSC3-207ENST00000490516 Q75L30 129 aa6.81□□□□□ -1.32
EXOSC3-207ENST00000490516 C20orf166-AS1Q96NR2 134 aa6.81□□□□□ -1.32
EXOSC3-207ENST00000490516 LAMTOR3Q9UHA4 124 aa6.81□□□□□ -1.32
EXOSC3-207ENST00000490516 C5orf52A6NGY3 159 aa6.8□□□□□ -1.32
EXOSC3-207ENST00000490516 C11orf86A6NJI1 115 aa6.8□□□□□ -1.32
EXOSC3-207ENST00000490516 MEIG1Q5JSS6 88 aa6.8□□□□□ -1.32
EXOSC3-207ENST00000490516 TMEM170BQ5T4T1 132 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms