RNA–Protein interactions for RNA: ENST00000489131.1

TOP3A-206, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-206ENST00000489131 Q6ZRP5 223 aa8.29□□□□□ -1.08
TOP3A-206ENST00000489131 C9orf163Q8N9P6 203 aa8.29□□□□□ -1.08
TOP3A-206ENST00000489131 LOC107984640A0A0U1RRK4 108 aa8.28□□□□□ -1.08
TOP3A-206ENST00000489131 RTL8CO15255 209 aa8.28□□□□□ -1.08
TOP3A-206ENST00000489131 PRO1854Q9UHT4 67 aa8.28□□□□□ -1.08
TOP3A-206ENST00000489131 PLA2G2DQ9UNK4 145 aa8.28□□□□□ -1.08
TOP3A-206ENST00000489131 IGKV2-28A0A075B6P5 120 aa8.27□□□□□ -1.09
TOP3A-206ENST00000489131 K7ERJ3 54 aa8.27□□□□□ -1.09
TOP3A-206ENST00000489131 IGKV2D-28P01615 120 aa8.27□□□□□ -1.09
TOP3A-206ENST00000489131 TRBV10-2A0A0K0K1G8 114 aa8.26□□□□□ -1.09
TOP3A-206ENST00000489131 TRAV13-2A0A0B4J235 113 aa8.25□□□□□ -1.09
TOP3A-206ENST00000489131 C9orf118A6NHY6 69 aa8.25□□□□□ -1.09
TOP3A-206ENST00000489131 C16orf90A8MZG2 172 aa8.25□□□□□ -1.09
TOP3A-206ENST00000489131 C9orf129Q5T035 196 aaKnown RBP8.25□□□□□ -1.09
TOP3A-206ENST00000489131 Q8NDZ9 215 aa8.25□□□□□ -1.09
TOP3A-206ENST00000489131 RAB37Q96AX2 223 aa8.25□□□□□ -1.09
TOP3A-206ENST00000489131 IGLV5-37A0A075B6J1 123 aa8.24□□□□□ -1.09
TOP3A-206ENST00000489131 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.24□□□□□ -1.09
TOP3A-206ENST00000489131 VPREB1P12018 145 aa8.24□□□□□ -1.09
TOP3A-206ENST00000489131 TNP2Q05952 138 aa8.24□□□□□ -1.09
TOP3A-206ENST00000489131 XAGE1AQ9HD64 81 aa8.24□□□□□ -1.09
TOP3A-206ENST00000489131 RPL18AQ02543 176 aaKnown RBP8.23□□□□□ -1.09
TOP3A-206ENST00000489131 SDIM1Q6ZPB5 146 aa8.23□□□□□ -1.09
TOP3A-206ENST00000489131 LINC00337Q8N6G1 96 aa8.23□□□□□ -1.09
TOP3A-206ENST00000489131 HYDINQ4G0P3 5121 aa8.22□□□□□ -1.09
TOP3A-206ENST00000489131 TSPAN13O95857 204 aa8.22□□□□□ -1.09
TOP3A-206ENST00000489131 GAGE2EQ4V326 116 aa8.22□□□□□ -1.09
TOP3A-206ENST00000489131 PGPEP1Q9NXJ5 209 aa8.22□□□□□ -1.09
TOP3A-206ENST00000489131 GAGE2DQ9UEU5 116 aa8.22□□□□□ -1.09
TOP3A-206ENST00000489131 LINC00474Q9P2X8 69 aa8.21□□□□□ -1.1
TOP3A-206ENST00000489131 A0A096LNI7 61 aa8.2□□□□□ -1.1
TOP3A-206ENST00000489131 EPM2AB3EWF7 344 aa8.2□□□□□ -1.1
TOP3A-206ENST00000489131 RPL13AP40429 203 aaKnown RBP8.2□□□□□ -1.1
TOP3A-206ENST00000489131 LINC00336Q6ZUF6 198 aa8.2□□□□□ -1.1
TOP3A-206ENST00000489131 FRAS1Q86XX4 4008 aa8.19□□□□□ -1.1
TOP3A-206ENST00000489131 IGLV6-57P01721 117 aa8.19□□□□□ -1.1
TOP3A-206ENST00000489131 GAGE2BQ13066 116 aa8.19□□□□□ -1.1
TOP3A-206ENST00000489131 KRTAP7-1Q8IUC3 87 aa8.19□□□□□ -1.1
TOP3A-206ENST00000489131 TMEM126AQ9H061 195 aa8.19□□□□□ -1.1
TOP3A-206ENST00000489131 RYR2Q92736 4967 aa8.18□□□□□ -1.1
TOP3A-206ENST00000489131 A0A1W2PPM0 123 aa8.18□□□□□ -1.1
TOP3A-206ENST00000489131 H3BUT2 72 aa8.18□□□□□ -1.1
TOP3A-206ENST00000489131 M0R378 163 aa8.18□□□□□ -1.1
TOP3A-206ENST00000489131 RPL28P46779 137 aaKnown RBP8.18□□□□□ -1.1
TOP3A-206ENST00000489131 PRR3P79522 188 aaKnown RBP8.17□□□□□ -1.1
TOP3A-206ENST00000489131 SERTAD4-AS1Q5TG53 156 aa8.17□□□□□ -1.1
TOP3A-206ENST00000489131 FAT2Q9NYQ8 4349 aa8.17□□□□□ -1.1
TOP3A-206ENST00000489131 IGLV5-52A0A0A0MRZ9 124 aa8.16□□□□□ -1.1
TOP3A-206ENST00000489131 NCR3O14931 201 aa8.16□□□□□ -1.1
TOP3A-206ENST00000489131 DNAH11Q96DT5 4516 aa8.16□□□□□ -1.1
TOP3A-206ENST00000489131 A0A1B0GV90 55 aa8.15□□□□□ -1.1
TOP3A-206ENST00000489131 LYRM7Q5U5X0 104 aa8.15□□□□□ -1.1
TOP3A-206ENST00000489131 SPACA4Q8TDM5 124 aa8.15□□□□□ -1.1
TOP3A-206ENST00000489131 CBY1Q9Y3M2 126 aa8.15□□□□□ -1.1
TOP3A-206ENST00000489131 FAM168BA1KXE4 195 aa8.14□□□□□ -1.11
TOP3A-206ENST00000489131 TRIAP1O43715 76 aa8.14□□□□□ -1.11
TOP3A-206ENST00000489131 FABP2P12104 132 aa8.14□□□□□ -1.11
TOP3A-206ENST00000489131 KRTAP10-2P60368 255 aa8.14□□□□□ -1.11
TOP3A-206ENST00000489131 Q1RN00 199 aa8.14□□□□□ -1.11
TOP3A-206ENST00000489131 S100A7L2Q5SY68 101 aa8.14□□□□□ -1.11
TOP3A-206ENST00000489131 SMIM11BQ8TCY0 68 aa8.14□□□□□ -1.11
TOP3A-206ENST00000489131 EPPK1P58107 5090 aaKnown RBP8.14□□□□□ -1.11
TOP3A-206ENST00000489131 TRBV10-3A0A0K0K1G6 114 aa8.13□□□□□ -1.11
TOP3A-206ENST00000489131 NKAPP1Q8N9T2 125 aa8.13□□□□□ -1.11
TOP3A-206ENST00000489131 OR13C6PQ8NH95 151 aa8.13□□□□□ -1.11
TOP3A-206ENST00000489131 C7orf33Q8WU49 177 aa8.13□□□□□ -1.11
TOP3A-206ENST00000489131 NAA38Q9BRA0 125 aaKnown RBP8.13□□□□□ -1.11
TOP3A-206ENST00000489131 C22orf24Q9Y442 160 aa8.13□□□□□ -1.11
TOP3A-206ENST00000489131 IGKV2-24A0A0C4DH68 120 aa8.12□□□□□ -1.11
TOP3A-206ENST00000489131 A0A1W2PNN7 141 aa8.12□□□□□ -1.11
TOP3A-206ENST00000489131 H7C2G1 150 aa8.12□□□□□ -1.11
TOP3A-206ENST00000489131 COX6CP09669 75 aa8.12□□□□□ -1.11
TOP3A-206ENST00000489131 LINC01620Q4KN68 170 aa8.12□□□□□ -1.11
TOP3A-206ENST00000489131 KCNQ1DNQ9H478 68 aa8.12□□□□□ -1.11
TOP3A-206ENST00000489131 IGLV1-50A0A075B6I6 118 aa8.11□□□□□ -1.11
TOP3A-206ENST00000489131 TRBV20-1A0A075B6N2 111 aa8.11□□□□□ -1.11
TOP3A-206ENST00000489131 TRBV7-6A0A0J9YX20 115 aa8.11□□□□□ -1.11
TOP3A-206ENST00000489131 PANO1I0J062 215 aa8.11□□□□□ -1.11
TOP3A-206ENST00000489131 CHTF8P0CG12 524 aa8.11□□□□□ -1.11
TOP3A-206ENST00000489131 PSMB2P49721 201 aa8.11□□□□□ -1.11
TOP3A-206ENST00000489131 MRPL55Q7Z7F7 128 aaKnown RBP8.11□□□□□ -1.11
TOP3A-206ENST00000489131 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.11□□□□□ -1.11
TOP3A-206ENST00000489131 TRAV23DV6A0A075B6W5 121 aa8.1□□□□□ -1.11
TOP3A-206ENST00000489131 A0A1B0GVY2 172 aa8.1□□□□□ -1.11
TOP3A-206ENST00000489131 K7EP34 96 aa8.1□□□□□ -1.11
TOP3A-206ENST00000489131 Q6ZSA8 131 aa8.1□□□□□ -1.11
TOP3A-206ENST00000489131 SPCS1Q9Y6A9 102 aa8.1□□□□□ -1.11
TOP3A-206ENST00000489131 BIRC6Q9NR09 4857 aa8.1□□□□□ -1.11
TOP3A-206ENST00000489131 PKD1P98161 4303 aa8.09□□□□□ -1.11
TOP3A-206ENST00000489131 H0YGX0 51 aa8.09□□□□□ -1.11
TOP3A-206ENST00000489131 M0QXV9 152 aa8.09□□□□□ -1.11
TOP3A-206ENST00000489131 SPRR1AP35321 89 aa8.09□□□□□ -1.11
TOP3A-206ENST00000489131 VAMP3Q15836 100 aa8.09□□□□□ -1.11
TOP3A-206ENST00000489131 FAM19A5Q7Z5A7 132 aaPredicted RBP8.09□□□□□ -1.11
TOP3A-206ENST00000489131 LINC00167Q96N53 147 aa8.09□□□□□ -1.11
TOP3A-206ENST00000489131 PLAC8Q9NZF1 115 aa8.09□□□□□ -1.11
TOP3A-206ENST00000489131 HECTD4Q9Y4D8 3996 aa8.09□□□□□ -1.11
TOP3A-206ENST00000489131 PRYO14603 147 aa8.08□□□□□ -1.12
TOP3A-206ENST00000489131 GTF2H5Q6ZYL4 71 aa8.08□□□□□ -1.12
TOP3A-206ENST00000489131 DNAH5Q8TE73 4624 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 168.1 ms