RNA–Protein interactions for RNA: ENST00000487300.1

SRM-205, Transcript of spermidine synthase, humanhuman

TSL 2

Gene SRM, Length 611 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-205ENST00000487300 FAM229BQ4G0N7 80 aa13.16□□□□□ -0.3
SRM-205ENST00000487300 KRTAP13-2Q52LG2 175 aa13.16□□□□□ -0.3
SRM-205ENST00000487300 TMEM238C9JI98 176 aa13.15□□□□□ -0.3
SRM-205ENST00000487300 PRLHP81277 87 aa13.14□□□□□ -0.31
SRM-205ENST00000487300 TYMSOSQ8TAI1 123 aa13.14□□□□□ -0.31
SRM-205ENST00000487300 ANAPC11Q9NYG5 84 aa13.13□□□□□ -0.31
SRM-205ENST00000487300 HSBP1O75506 76 aa13.12□□□□□ -0.31
SRM-205ENST00000487300 LINC00310P59036 64 aa13.12□□□□□ -0.31
SRM-205ENST00000487300 FAM19A2Q8N3H0 131 aa13.12□□□□□ -0.31
SRM-205ENST00000487300 FAM19A1Q7Z5A9 133 aa13.11□□□□□ -0.31
SRM-205ENST00000487300 LINC00158P58513 81 aa13.1□□□□□ -0.31
SRM-205ENST00000487300 PRR4Q16378 134 aa13.1□□□□□ -0.31
SRM-205ENST00000487300 TRGC2P03986 189 aa13.09□□□□□ -0.31
SRM-205ENST00000487300 SMIM13P0DJ93 91 aa13.07□□□□□ -0.32
SRM-205ENST00000487300 HERV-K104P63124 156 aa13.07□□□□□ -0.32
SRM-205ENST00000487300 TSPAN13O95857 204 aa13.06□□□□□ -0.32
SRM-205ENST00000487300 PLEKHB2Q96CS7 222 aa13.06□□□□□ -0.32
SRM-205ENST00000487300 A0A0U1RRA0 63 aa13.05□□□□□ -0.32
SRM-205ENST00000487300 SERF1AO75920 110 aa13.05□□□□□ -0.32
SRM-205ENST00000487300 MUC2Q02817 5179 aa13.05□□□□□ -0.32
SRM-205ENST00000487300 MIR7-3HGQ8N6C7 128 aa13.04□□□□□ -0.32
SRM-205ENST00000487300 NDUFA12Q9UI09 145 aa13.04□□□□□ -0.32
SRM-205ENST00000487300 LEPROTL1O95214 131 aa13.03□□□□□ -0.32
SRM-205ENST00000487300 SPRR1AP35321 89 aa13.02□□□□□ -0.33
SRM-205ENST00000487300 TSPEAR-AS2P59090 65 aa13.02□□□□□ -0.33
SRM-205ENST00000487300 MEIG1Q5JSS6 88 aa13.02□□□□□ -0.33
SRM-205ENST00000487300 IGKV2D-26A0A0A0MRZ7 120 aa13.01□□□□□ -0.33
SRM-205ENST00000487300 BOD1L2Q8IYS8 172 aa13.01□□□□□ -0.33
SRM-205ENST00000487300 LINC00304Q8N9R0 145 aa13.01□□□□□ -0.33
SRM-205ENST00000487300 MYMXA0A1B0GTQ4 84 aa13□□□□□ -0.33
SRM-205ENST00000487300 LINC00587B1AMM8 73 aa13□□□□□ -0.33
SRM-205ENST00000487300 PRYO14603 147 aa13□□□□□ -0.33
SRM-205ENST00000487300 PLNP26678 52 aa13□□□□□ -0.33
SRM-205ENST00000487300 CTAG1AP78358 180 aa13□□□□□ -0.33
SRM-205ENST00000487300 LOC107984156A0A0G2JMH3 177 aa12.99□□□□□ -0.33
SRM-205ENST00000487300 KRTAP4-16G5E9R7 235 aaPredicted RBP12.99□□□□□ -0.33
SRM-205ENST00000487300 H0Y8G0 127 aa12.99□□□□□ -0.33
SRM-205ENST00000487300 ARL17AQ8IVW1 177 aa12.99□□□□□ -0.33
SRM-205ENST00000487300 KCNQ1DNQ9H478 68 aa12.99□□□□□ -0.33
SRM-205ENST00000487300 COLCA2A8K830 154 aa12.98□□□□□ -0.33
SRM-205ENST00000487300 LINC00337Q8N6G1 96 aa12.98□□□□□ -0.33
SRM-205ENST00000487300 HIGD2AQ9BW72 106 aa12.98□□□□□ -0.33
SRM-205ENST00000487300 LEPROTO15243 131 aa12.97□□□□□ -0.33
SRM-205ENST00000487300 ATP6V1G1O75348 118 aa12.97□□□□□ -0.33
SRM-205ENST00000487300 SLC7A5P1Q8MH63 180 aa12.97□□□□□ -0.33
SRM-205ENST00000487300 SPRR4Q96PI1 79 aa12.97□□□□□ -0.33
SRM-205ENST00000487300 NCR3O14931 201 aa12.96□□□□□ -0.33
SRM-205ENST00000487300 MAP1LC3CQ9BXW4 147 aa12.96□□□□□ -0.33
SRM-205ENST00000487300 HSPB8Q9UJY1 196 aa12.96□□□□□ -0.33
SRM-205ENST00000487300 C3orf22Q8N5N4 141 aa12.95□□□□□ -0.34
SRM-205ENST00000487300 DPM2O94777 84 aa12.94□□□□□ -0.34
SRM-205ENST00000487300 J3QQQ9 107 aa12.93□□□□□ -0.34
SRM-205ENST00000487300 TRBV10-3A0A0K0K1G6 114 aa12.92□□□□□ -0.34
SRM-205ENST00000487300 FABP4P15090 132 aa12.91□□□□□ -0.34
SRM-205ENST00000487300 NMUP48645 174 aa12.91□□□□□ -0.34
SRM-205ENST00000487300 PMCHL2Q9BQD1 86 aa12.91□□□□□ -0.34
SRM-205ENST00000487300 ZNF706Q9Y5V0 76 aaPredicted RBP12.91□□□□□ -0.34
SRM-205ENST00000487300 IGKCP01834 107 aa12.9□□□□□ -0.34
SRM-205ENST00000487300 DAND5Q8N907 189 aa12.9□□□□□ -0.34
SRM-205ENST00000487300 RETNLBQ9BQ08 111 aa12.9□□□□□ -0.34
SRM-205ENST00000487300 TRBV10-2A0A0K0K1G8 114 aa12.89□□□□□ -0.35
SRM-205ENST00000487300 HERVK_113P61574 105 aa12.89□□□□□ -0.35
SRM-205ENST00000487300 SMCR5Q8TEV8 140 aa12.89□□□□□ -0.35
SRM-205ENST00000487300 ETDCA0A1B0GVM5 59 aa12.86□□□□□ -0.35
SRM-205ENST00000487300 TPRXLQ17RH7 258 aa12.86□□□□□ -0.35
SRM-205ENST00000487300 B5MCH6 92 aa12.85□□□□□ -0.35
SRM-205ENST00000487300 NDUFC2O95298 119 aa12.85□□□□□ -0.35
SRM-205ENST00000487300 LINC00483Q53H64 154 aa12.85□□□□□ -0.35
SRM-205ENST00000487300 SPANXB1Q9NS25 103 aaPredicted RBP12.85□□□□□ -0.35
SRM-205ENST00000487300 MUC17Q685J3 4493 aa12.85□□□□□ -0.35
SRM-205ENST00000487300 LGALS3P17931 250 aaKnown RBP12.84□□□□□ -0.35
SRM-205ENST00000487300 SPAG11AQ6PDA7 123 aa12.84□□□□□ -0.35
SRM-205ENST00000487300 DDTP30046 118 aa12.83□□□□□ -0.36
SRM-205ENST00000487300 E9PLD3 99 aa12.82□□□□□ -0.36
SRM-205ENST00000487300 IGLV6-57P01721 117 aa12.82□□□□□ -0.36
SRM-205ENST00000487300 HIST1H2BKO60814 126 aa12.81□□□□□ -0.36
SRM-205ENST00000487300 HIST1H2BJP06899 126 aa12.81□□□□□ -0.36
SRM-205ENST00000487300 HIST1H2BOP23527 126 aa12.81□□□□□ -0.36
SRM-205ENST00000487300 HIST1H2BBP33778 126 aa12.81□□□□□ -0.36
SRM-205ENST00000487300 HIST1H2BDP58876 126 aa12.81□□□□□ -0.36
SRM-205ENST00000487300 HIST1H2BCP62807 126 aa12.81□□□□□ -0.36
SRM-205ENST00000487300 S100A12P80511 92 aa12.81□□□□□ -0.36
SRM-205ENST00000487300 HIST2H2BEQ16778 126 aa12.81□□□□□ -0.36
SRM-205ENST00000487300 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.81□□□□□ -0.36
SRM-205ENST00000487300 SOSTDC1Q6X4U4 206 aa12.81□□□□□ -0.36
SRM-205ENST00000487300 HIST1H2BHQ93079 126 aa12.81□□□□□ -0.36
SRM-205ENST00000487300 HIST1H2BNQ99877 126 aa12.81□□□□□ -0.36
SRM-205ENST00000487300 HIST1H2BMQ99879 126 aa12.81□□□□□ -0.36
SRM-205ENST00000487300 A0A0J9YXY3 114 aa12.8□□□□□ -0.36
SRM-205ENST00000487300 EIF4EBP3O60516 100 aaPredicted RBP12.8□□□□□ -0.36
SRM-205ENST00000487300 Q6ZRX8 168 aa12.8□□□□□ -0.36
SRM-205ENST00000487300 Q9BRP9 147 aa12.8□□□□□ -0.36
SRM-205ENST00000487300 MIEN1Q9BRT3 115 aa12.8□□□□□ -0.36
SRM-205ENST00000487300 IGLV7-46A0A075B6I9 117 aa12.78□□□□□ -0.36
SRM-205ENST00000487300 SYS1-DBNDD2H3BUS1 97 aa12.78□□□□□ -0.36
SRM-205ENST00000487300 ERC2-IT1O76042 136 aa12.78□□□□□ -0.36
SRM-205ENST00000487300 ADAMTSL4-AS1Q5T5F5 129 aa12.78□□□□□ -0.36
SRM-205ENST00000487300 Q8NBF4 154 aa12.78□□□□□ -0.36
SRM-205ENST00000487300 LINC01545Q5VT33 79 aa12.76□□□□□ -0.37
SRM-205ENST00000487300 PPDPFQ9H3Y8 114 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 182.7 ms