RNA–Protein interactions for RNA: ENST00000486991.1

NR1H3-223, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 4

Gene NR1H3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-223ENST00000486991 SCGB1D4Q6XE38 83 aa8.33□□□□□ -1.08
NR1H3-223ENST00000486991 SDIM1Q6ZPB5 146 aa8.33□□□□□ -1.08
NR1H3-223ENST00000486991 GAGE2DQ9UEU5 116 aa8.33□□□□□ -1.08
NR1H3-223ENST00000486991 A0A096LNI7 61 aa8.32□□□□□ -1.08
NR1H3-223ENST00000486991 IGKV2-24A0A0C4DH68 120 aa8.32□□□□□ -1.08
NR1H3-223ENST00000486991 LINC00587B1AMM8 73 aa8.32□□□□□ -1.08
NR1H3-223ENST00000486991 TLX1NBP0CAT3 122 aa8.32□□□□□ -1.08
NR1H3-223ENST00000486991 COX17Q14061 63 aa8.32□□□□□ -1.08
NR1H3-223ENST00000486991 Q6ZRP5 223 aa8.32□□□□□ -1.08
NR1H3-223ENST00000486991 CIRBP-AS1Q8TBR5 109 aa8.32□□□□□ -1.08
NR1H3-223ENST00000486991 TP73-AS1Q9UF72 201 aa8.32□□□□□ -1.08
NR1H3-223ENST00000486991 CIRBPQ14011 172 aaKnown RBP8.31□□□□□ -1.08
NR1H3-223ENST00000486991 BOD1L2Q8IYS8 172 aa8.31□□□□□ -1.08
NR1H3-223ENST00000486991 PANO1I0J062 215 aa8.3□□□□□ -1.08
NR1H3-223ENST00000486991 CHTF8P0CG12 524 aa8.3□□□□□ -1.08
NR1H3-223ENST00000486991 PTTG1IPP53801 180 aa8.3□□□□□ -1.08
NR1H3-223ENST00000486991 SLC25A34Q6PIV7 304 aa8.3□□□□□ -1.08
NR1H3-223ENST00000486991 C12orf57Q99622 126 aa8.3□□□□□ -1.08
NR1H3-223ENST00000486991 MIR7-3HGQ8N6C7 128 aa8.29□□□□□ -1.08
NR1H3-223ENST00000486991 DAND5Q8N907 189 aa8.29□□□□□ -1.08
NR1H3-223ENST00000486991 DPH3Q96FX2 82 aa8.29□□□□□ -1.08
NR1H3-223ENST00000486991 XAGE1AQ9HD64 81 aa8.29□□□□□ -1.08
NR1H3-223ENST00000486991 DLEU1O43261 78 aa8.28□□□□□ -1.08
NR1H3-223ENST00000486991 TIMM17BO60830 172 aa8.28□□□□□ -1.08
NR1H3-223ENST00000486991 ADAMTSL4-AS1Q5T5F5 129 aa8.28□□□□□ -1.08
NR1H3-223ENST00000486991 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.28□□□□□ -1.08
NR1H3-223ENST00000486991 TMEM238C9JI98 176 aa8.27□□□□□ -1.09
NR1H3-223ENST00000486991 LITAFQ99732 161 aa8.27□□□□□ -1.09
NR1H3-223ENST00000486991 PRO1933Q9H354 126 aa8.27□□□□□ -1.09
NR1H3-223ENST00000486991 SND1-IT1Q9HBX3 110 aa8.27□□□□□ -1.09
NR1H3-223ENST00000486991 LINC00474Q9P2X8 69 aa8.27□□□□□ -1.09
NR1H3-223ENST00000486991 NPC2P61916 151 aa8.26□□□□□ -1.09
NR1H3-223ENST00000486991 C9orf129Q5T035 196 aaKnown RBP8.26□□□□□ -1.09
NR1H3-223ENST00000486991 SERTAD4-AS1Q5TG53 156 aa8.26□□□□□ -1.09
NR1H3-223ENST00000486991 LINC00518Q8N0U6 118 aa8.26□□□□□ -1.09
NR1H3-223ENST00000486991 HNRNPA3P51991 378 aaKnown RBP8.25□□□□□ -1.09
NR1H3-223ENST00000486991 RPL37AP61513 92 aaKnown RBP8.25□□□□□ -1.09
NR1H3-223ENST00000486991 SPACA4Q8TDM5 124 aa8.25□□□□□ -1.09
NR1H3-223ENST00000486991 UQCR10Q9UDW1 63 aa8.25□□□□□ -1.09
NR1H3-223ENST00000486991 MIEN1Q9BRT3 115 aa8.24□□□□□ -1.09
NR1H3-223ENST00000486991 SPANXDQ9BXN6 97 aa8.24□□□□□ -1.09
NR1H3-223ENST00000486991 SPANXCQ9NY87 97 aa8.24□□□□□ -1.09
NR1H3-223ENST00000486991 FAM168BA1KXE4 195 aa8.23□□□□□ -1.09
NR1H3-223ENST00000486991 OXTP01178 125 aa8.23□□□□□ -1.09
NR1H3-223ENST00000486991 SRSF9Q13242 221 aaKnown RBP eCLIP8.23□□□□□ -1.09
NR1H3-223ENST00000486991 C2orf91Q6ZV80 131 aa8.23□□□□□ -1.09
NR1H3-223ENST00000486991 FAM19A5Q7Z5A7 132 aaPredicted RBP8.23□□□□□ -1.09
NR1H3-223ENST00000486991 PLA2G2DQ9UNK4 145 aa8.23□□□□□ -1.09
NR1H3-223ENST00000486991 A0A087WYN8 130 aa8.22□□□□□ -1.09
NR1H3-223ENST00000486991 A0A1W2PNN7 141 aa8.22□□□□□ -1.09
NR1H3-223ENST00000486991 SOSTDC1Q6X4U4 206 aa8.22□□□□□ -1.09
NR1H3-223ENST00000486991 LINC00308Q8TCZ7 52 aa8.22□□□□□ -1.09
NR1H3-223ENST00000486991 SPANXB1Q9NS25 103 aaPredicted RBP8.22□□□□□ -1.09
NR1H3-223ENST00000486991 HIGD1BQ9P298 99 aa8.22□□□□□ -1.09
NR1H3-223ENST00000486991 EIF4EBP3O60516 100 aaPredicted RBP8.21□□□□□ -1.1
NR1H3-223ENST00000486991 Q6ZVH6 145 aa8.21□□□□□ -1.1
NR1H3-223ENST00000486991 HIST1H4GQ99525 98 aa8.21□□□□□ -1.1
NR1H3-223ENST00000486991 TSTD3H0UI37 97 aa8.2□□□□□ -1.1
NR1H3-223ENST00000486991 IFITM1P13164 125 aa8.2□□□□□ -1.1
NR1H3-223ENST00000486991 RPL24P83731 157 aaKnown RBP8.2□□□□□ -1.1
NR1H3-223ENST00000486991 MUSTN1Q8IVN3 82 aa8.2□□□□□ -1.1
NR1H3-223ENST00000486991 COPS9Q8WXC6 57 aa8.2□□□□□ -1.1
NR1H3-223ENST00000486991 LOC107984156A0A0G2JMH3 177 aa8.19□□□□□ -1.1
NR1H3-223ENST00000486991 ARL17AQ8IVW1 177 aa8.19□□□□□ -1.1
NR1H3-223ENST00000486991 C7orf33Q8WU49 177 aa8.19□□□□□ -1.1
NR1H3-223ENST00000486991 PLAC8Q9NZF1 115 aa8.19□□□□□ -1.1
NR1H3-223ENST00000486991 M0QXV9 152 aa8.18□□□□□ -1.1
NR1H3-223ENST00000486991 VPREB1P12018 145 aa8.18□□□□□ -1.1
NR1H3-223ENST00000486991 KRTAP7-1Q8IUC3 87 aa8.18□□□□□ -1.1
NR1H3-223ENST00000486991 NKAPP1Q8N9T2 125 aa8.18□□□□□ -1.1
NR1H3-223ENST00000486991 Q8NDZ9 215 aa8.18□□□□□ -1.1
NR1H3-223ENST00000486991 NCR3O14931 201 aa8.17□□□□□ -1.1
NR1H3-223ENST00000486991 PRR3P79522 188 aaKnown RBP8.17□□□□□ -1.1
NR1H3-223ENST00000486991 C22orf24Q9Y442 160 aa8.17□□□□□ -1.1
NR1H3-223ENST00000486991 IGLV5-37A0A075B6J1 123 aa8.16□□□□□ -1.1
NR1H3-223ENST00000486991 PHF5AQ7RTV0 110 aaKnown RBP8.16□□□□□ -1.1
NR1H3-223ENST00000486991 GAGE10A6NGK3 116 aa8.15□□□□□ -1.1
NR1H3-223ENST00000486991 NDUFC2O95298 119 aa8.15□□□□□ -1.1
NR1H3-223ENST00000486991 MT1HL1P0DM35 61 aa8.15□□□□□ -1.1
NR1H3-223ENST00000486991 HSD52Q0P140 79 aa8.15□□□□□ -1.1
NR1H3-223ENST00000486991 TAL2Q16559 108 aa8.15□□□□□ -1.1
NR1H3-223ENST00000486991 RNF213Q63HN8 5207 aa8.15□□□□□ -1.11
NR1H3-223ENST00000486991 LBHQ53QV2 105 aaPredicted RBP8.14□□□□□ -1.11
NR1H3-223ENST00000486991 MRPL55Q7Z7F7 128 aaKnown RBP8.14□□□□□ -1.11
NR1H3-223ENST00000486991 PPDPFQ9H3Y8 114 aa8.14□□□□□ -1.11
NR1H3-223ENST00000486991 A4D1N5 150 aa8.13□□□□□ -1.11
NR1H3-223ENST00000486991 M0R378 163 aa8.13□□□□□ -1.11
NR1H3-223ENST00000486991 UBE2BP63146 152 aa8.13□□□□□ -1.11
NR1H3-223ENST00000486991 CEND1Q8N111 149 aa8.13□□□□□ -1.11
NR1H3-223ENST00000486991 LRP2P98164 4655 aa8.12□□□□□ -1.11
NR1H3-223ENST00000486991 CTAG1AP78358 180 aa8.12□□□□□ -1.11
NR1H3-223ENST00000486991 LINC00167Q96N53 147 aa8.12□□□□□ -1.11
NR1H3-223ENST00000486991 IGKV2-28A0A075B6P5 120 aa8.11□□□□□ -1.11
NR1H3-223ENST00000486991 TRBV10-2A0A0K0K1G8 114 aa8.11□□□□□ -1.11
NR1H3-223ENST00000486991 RPL37AP8A6NKH3 93 aa8.11□□□□□ -1.11
NR1H3-223ENST00000486991 IGKV2D-28P01615 120 aa8.11□□□□□ -1.11
NR1H3-223ENST00000486991 OR13C6PQ8NH95 151 aa8.11□□□□□ -1.11
NR1H3-223ENST00000486991 TNXBP22105 4242 aa8.1□□□□□ -1.11
NR1H3-223ENST00000486991 S100A7L2Q5SY68 101 aa8.1□□□□□ -1.11
NR1H3-223ENST00000486991 TMEM238LA0A1B0GVL6 79 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 101.4 ms