RNA–Protein interactions for RNA: ENST00000486978.5

CTDSPL-208, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 609 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-208ENST00000486978 C22orf24Q9Y442 160 aa3.89□□□□□ -1.79
CTDSPL-208ENST00000486978 C11orf86A6NJI1 115 aa3.88□□□□□ -1.79
CTDSPL-208ENST00000486978 NUPR1O60356 82 aa3.88□□□□□ -1.79
CTDSPL-208ENST00000486978 TMEM170BQ5T4T1 132 aa3.88□□□□□ -1.79
CTDSPL-208ENST00000486978 MRPL55Q7Z7F7 128 aaKnown RBP3.88□□□□□ -1.79
CTDSPL-208ENST00000486978 CBLN2Q8IUK8 224 aa3.88□□□□□ -1.79
CTDSPL-208ENST00000486978 CHCHD1Q96BP2 118 aaKnown RBP3.88□□□□□ -1.79
CTDSPL-208ENST00000486978 IGLV5-37A0A075B6J1 123 aa3.87□□□□□ -1.79
CTDSPL-208ENST00000486978 TRAV12-1A0A0B4J245 112 aa3.87□□□□□ -1.79
CTDSPL-208ENST00000486978 IFI27L1Q96BM0 104 aa3.87□□□□□ -1.79
CTDSPL-208ENST00000486978 CHTOPQ9Y3Y2 248 aaKnown RBP3.87□□□□□ -1.79
CTDSPL-208ENST00000486978 ZNF861PO60384 105 aa3.86□□□□□ -1.79
CTDSPL-208ENST00000486978 HSBP1O75506 76 aa3.86□□□□□ -1.79
CTDSPL-208ENST00000486978 PFN2P35080 140 aa3.86□□□□□ -1.79
CTDSPL-208ENST00000486978 SFTA2Q6UW10 78 aa3.86□□□□□ -1.79
CTDSPL-208ENST00000486978 PRR26Q8N8Z3 221 aa3.86□□□□□ -1.79
CTDSPL-208ENST00000486978 NKAPP1Q8N9T2 125 aa3.86□□□□□ -1.79
CTDSPL-208ENST00000486978 LINC00167Q96N53 147 aa3.86□□□□□ -1.79
CTDSPL-208ENST00000486978 ERG28Q9UKR5 140 aa3.86□□□□□ -1.79
CTDSPL-208ENST00000486978 IGLV1-50A0A075B6I6 118 aa3.85□□□□□ -1.79
CTDSPL-208ENST00000486978 GAGE10A6NGK3 116 aa3.85□□□□□ -1.79
CTDSPL-208ENST00000486978 BCE1O60756 84 aa3.85□□□□□ -1.79
CTDSPL-208ENST00000486978 TRGC2P03986 189 aa3.85□□□□□ -1.79
CTDSPL-208ENST00000486978 KRTAP1-4P0C5Y4 121 aa3.85□□□□□ -1.79
CTDSPL-208ENST00000486978 COX17Q14061 63 aa3.85□□□□□ -1.79
CTDSPL-208ENST00000486978 SLC7A5P1Q8MH63 180 aa3.85□□□□□ -1.79
CTDSPL-208ENST00000486978 FAM19A2Q8N3H0 131 aa3.85□□□□□ -1.79
CTDSPL-208ENST00000486978 ZNF625Q96I27 306 aaPredicted RBP3.85□□□□□ -1.79
CTDSPL-208ENST00000486978 TMEM223A0PJW6 202 aa3.84□□□□□ -1.79
CTDSPL-208ENST00000486978 RPL37AP8A6NKH3 93 aa3.84□□□□□ -1.79
CTDSPL-208ENST00000486978 VPREB1P12018 145 aa3.84□□□□□ -1.79
CTDSPL-208ENST00000486978 RPL28P46779 137 aaKnown RBP3.84□□□□□ -1.79
CTDSPL-208ENST00000486978 SND1-IT1Q9HBX3 110 aa3.84□□□□□ -1.79
CTDSPL-208ENST00000486978 SERF1AO75920 110 aa3.83□□□□□ -1.8
CTDSPL-208ENST00000486978 LEPROTL1O95214 131 aa3.83□□□□□ -1.8
CTDSPL-208ENST00000486978 RPL13AP40429 203 aaKnown RBP3.83□□□□□ -1.8
CTDSPL-208ENST00000486978 RPL24P83731 157 aaKnown RBP3.83□□□□□ -1.8
CTDSPL-208ENST00000486978 IGKV2-28A0A075B6P5 120 aa3.82□□□□□ -1.8
CTDSPL-208ENST00000486978 COLCA2A8K830 154 aa3.82□□□□□ -1.8
CTDSPL-208ENST00000486978 H0Y8G0 127 aa3.82□□□□□ -1.8
CTDSPL-208ENST00000486978 SCO1O75880 301 aa3.82□□□□□ -1.8
CTDSPL-208ENST00000486978 IGKV2D-28P01615 120 aa3.82□□□□□ -1.8
CTDSPL-208ENST00000486978 UBE2AP49459 152 aa3.82□□□□□ -1.8
CTDSPL-208ENST00000486978 LINC00158P58513 81 aa3.82□□□□□ -1.8
CTDSPL-208ENST00000486978 KRTAP4-7Q9BYR0 210 aa3.82□□□□□ -1.8
CTDSPL-208ENST00000486978 A0A0U1RRA0 63 aa3.81□□□□□ -1.8
CTDSPL-208ENST00000486978 HERV-K104P63124 156 aa3.81□□□□□ -1.8
CTDSPL-208ENST00000486978 MEIG1Q5JSS6 88 aa3.81□□□□□ -1.8
CTDSPL-208ENST00000486978 KRTAP13-1Q8IUC0 172 aa3.81□□□□□ -1.8
CTDSPL-208ENST00000486978 Q8NDZ9 215 aa3.81□□□□□ -1.8
CTDSPL-208ENST00000486978 HSPB8Q9UJY1 196 aa3.81□□□□□ -1.8
CTDSPL-208ENST00000486978 MYMXA0A1B0GTQ4 84 aa3.8□□□□□ -1.8
CTDSPL-208ENST00000486978 LINC00587B1AMM8 73 aa3.8□□□□□ -1.8
CTDSPL-208ENST00000486978 ATP6V1G1O75348 118 aa3.8□□□□□ -1.8
CTDSPL-208ENST00000486978 SMIM13P0DJ93 91 aa3.8□□□□□ -1.8
CTDSPL-208ENST00000486978 FABP4P15090 132 aa3.8□□□□□ -1.8
CTDSPL-208ENST00000486978 PLNP26678 52 aa3.8□□□□□ -1.8
CTDSPL-208ENST00000486978 PRR4Q16378 134 aa3.8□□□□□ -1.8
CTDSPL-208ENST00000486978 TMEM126AQ9H061 195 aa3.8□□□□□ -1.8
CTDSPL-208ENST00000486978 NDUFA12Q9UI09 145 aa3.8□□□□□ -1.8
CTDSPL-208ENST00000486978 A0A087X002 238 aa3.79□□□□□ -1.8
CTDSPL-208ENST00000486978 TMEM238C9JI98 176 aa3.79□□□□□ -1.8
CTDSPL-208ENST00000486978 M0R378 163 aa3.79□□□□□ -1.8
CTDSPL-208ENST00000486978 LEPROTO15243 131 aa3.79□□□□□ -1.8
CTDSPL-208ENST00000486978 DPM2O94777 84 aa3.79□□□□□ -1.8
CTDSPL-208ENST00000486978 IGKCP01834 107 aa3.79□□□□□ -1.8
CTDSPL-208ENST00000486978 CRYGAP11844 174 aa3.79□□□□□ -1.8
CTDSPL-208ENST00000486978 HERVK_113P61574 105 aa3.79□□□□□ -1.8
CTDSPL-208ENST00000486978 PRLHP81277 87 aa3.79□□□□□ -1.8
CTDSPL-208ENST00000486978 FAM19A1Q7Z5A9 133 aa3.79□□□□□ -1.8
CTDSPL-208ENST00000486978 MIR7-3HGQ8N6C7 128 aa3.79□□□□□ -1.8
CTDSPL-208ENST00000486978 PLEKHB2Q96CS7 222 aa3.79□□□□□ -1.8
CTDSPL-208ENST00000486978 MAP1LC3CQ9BXW4 147 aa3.79□□□□□ -1.8
CTDSPL-208ENST00000486978 CDIP1Q9H305 208 aa3.79□□□□□ -1.8
CTDSPL-208ENST00000486978 J3QQQ9 107 aa3.78□□□□□ -1.8
CTDSPL-208ENST00000486978 TSPEAR-AS2P59090 65 aa3.78□□□□□ -1.8
CTDSPL-208ENST00000486978 BOD1L2Q8IYS8 172 aa3.78□□□□□ -1.8
CTDSPL-208ENST00000486978 TYMSOSQ8TAI1 123 aa3.78□□□□□ -1.8
CTDSPL-208ENST00000486978 PMCHL2Q9BQD1 86 aa3.78□□□□□ -1.8
CTDSPL-208ENST00000486978 IGKV2D-26A0A0A0MRZ7 120 aa3.77□□□□□ -1.81
CTDSPL-208ENST00000486978 PRYO14603 147 aa3.77□□□□□ -1.81
CTDSPL-208ENST00000486978 NCR3O14931 201 aa3.77□□□□□ -1.81
CTDSPL-208ENST00000486978 HIST1H2BKO60814 126 aa3.77□□□□□ -1.81
CTDSPL-208ENST00000486978 HIST1H2BJP06899 126 aa3.77□□□□□ -1.81
CTDSPL-208ENST00000486978 HIST1H2BOP23527 126 aa3.77□□□□□ -1.81
CTDSPL-208ENST00000486978 HIST1H2BBP33778 126 aa3.77□□□□□ -1.81
CTDSPL-208ENST00000486978 NMUP48645 174 aa3.77□□□□□ -1.81
CTDSPL-208ENST00000486978 HIST1H2BDP58876 126 aa3.77□□□□□ -1.81
CTDSPL-208ENST00000486978 HIST1H2BCP62807 126 aa3.77□□□□□ -1.81
CTDSPL-208ENST00000486978 HIST2H2BEQ16778 126 aa3.77□□□□□ -1.81
CTDSPL-208ENST00000486978 FAM229BQ4G0N7 80 aa3.77□□□□□ -1.81
CTDSPL-208ENST00000486978 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.77□□□□□ -1.81
CTDSPL-208ENST00000486978 HIST1H2BHQ93079 126 aa3.77□□□□□ -1.81
CTDSPL-208ENST00000486978 HIST1H2BNQ99877 126 aa3.77□□□□□ -1.81
CTDSPL-208ENST00000486978 HIST1H2BMQ99879 126 aa3.77□□□□□ -1.81
CTDSPL-208ENST00000486978 ANAPC11Q9NYG5 84 aa3.77□□□□□ -1.81
CTDSPL-208ENST00000486978 LOC107984156A0A0G2JMH3 177 aa3.76□□□□□ -1.81
CTDSPL-208ENST00000486978 LGALS3P17931 250 aaKnown RBP3.76□□□□□ -1.81
CTDSPL-208ENST00000486978 KRTAP13-2Q52LG2 175 aa3.76□□□□□ -1.81
CTDSPL-208ENST00000486978 ARL17AQ8IVW1 177 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms