RNA–Protein interactions for RNA: ENST00000483021.5

R3HDM1-215, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-215ENST00000483021 TMEM238C9JI98 176 aa11.35□□□□□ -0.59
R3HDM1-215ENST00000483021 CTAG1AP78358 180 aa11.35□□□□□ -0.59
R3HDM1-215ENST00000483021 TMEM170BQ5T4T1 132 aa11.35□□□□□ -0.59
R3HDM1-215ENST00000483021 BAGE3Q86Y29 109 aa11.35□□□□□ -0.59
R3HDM1-215ENST00000483021 M0R378 163 aa11.34□□□□□ -0.59
R3HDM1-215ENST00000483021 PMCHL1Q16048 86 aa11.34□□□□□ -0.59
R3HDM1-215ENST00000483021 CBLN2Q8IUK8 224 aa11.31□□□□□ -0.6
R3HDM1-215ENST00000483021 Q8NDZ9 215 aa11.3□□□□□ -0.6
R3HDM1-215ENST00000483021 PLEKHB2Q96CS7 222 aa11.3□□□□□ -0.6
R3HDM1-215ENST00000483021 RETNLBQ9BQ08 111 aa11.3□□□□□ -0.6
R3HDM1-215ENST00000483021 CHTOPQ9Y3Y2 248 aaKnown RBP11.3□□□□□ -0.6
R3HDM1-215ENST00000483021 LINC00158P58513 81 aa11.29□□□□□ -0.6
R3HDM1-215ENST00000483021 HIGD2AQ9BW72 106 aa11.28□□□□□ -0.6
R3HDM1-215ENST00000483021 TPRXLQ17RH7 258 aa11.27□□□□□ -0.61
R3HDM1-215ENST00000483021 MUC17Q685J3 4493 aa11.27□□□□□ -0.61
R3HDM1-215ENST00000483021 TRAV12-1A0A0B4J245 112 aa11.26□□□□□ -0.61
R3HDM1-215ENST00000483021 TMEM223A0PJW6 202 aa11.26□□□□□ -0.61
R3HDM1-215ENST00000483021 IGLV7-46A0A075B6I9 117 aa11.24□□□□□ -0.61
R3HDM1-215ENST00000483021 ATP6V1G1O75348 118 aa11.24□□□□□ -0.61
R3HDM1-215ENST00000483021 SNAPINO95295 136 aa11.24□□□□□ -0.61
R3HDM1-215ENST00000483021 APOC3P02656 99 aa11.24□□□□□ -0.61
R3HDM1-215ENST00000483021 NDUFA5Q16718 116 aa11.24□□□□□ -0.61
R3HDM1-215ENST00000483021 C3orf22Q8N5N4 141 aa11.24□□□□□ -0.61
R3HDM1-215ENST00000483021 CHCHD1Q96BP2 118 aaKnown RBP11.24□□□□□ -0.61
R3HDM1-215ENST00000483021 CDIP1Q9H305 208 aa11.24□□□□□ -0.61
R3HDM1-215ENST00000483021 ZNF706Q9Y5V0 76 aaPredicted RBP11.24□□□□□ -0.61
R3HDM1-215ENST00000483021 A0A0U1RRA0 63 aa11.23□□□□□ -0.61
R3HDM1-215ENST00000483021 SPAG11AQ6PDA7 123 aa11.23□□□□□ -0.61
R3HDM1-215ENST00000483021 SVBPQ8N300 66 aa11.23□□□□□ -0.61
R3HDM1-215ENST00000483021 IFI27L1Q96BM0 104 aa11.23□□□□□ -0.61
R3HDM1-215ENST00000483021 PRYO14603 147 aa11.22□□□□□ -0.61
R3HDM1-215ENST00000483021 SPRR4Q96PI1 79 aa11.22□□□□□ -0.61
R3HDM1-215ENST00000483021 MEIG1Q5JSS6 88 aa11.21□□□□□ -0.61
R3HDM1-215ENST00000483021 FAT4Q6V0I7 4981 aa11.21□□□□□ -0.62
R3HDM1-215ENST00000483021 SMIM13P0DJ93 91 aa11.2□□□□□ -0.62
R3HDM1-215ENST00000483021 HERV-K104P63124 156 aa11.2□□□□□ -0.62
R3HDM1-215ENST00000483021 BOD1L2Q8IYS8 172 aa11.2□□□□□ -0.62
R3HDM1-215ENST00000483021 LINC00587B1AMM8 73 aa11.19□□□□□ -0.62
R3HDM1-215ENST00000483021 LINC00337Q8N6G1 96 aa11.19□□□□□ -0.62
R3HDM1-215ENST00000483021 MIR7-3HGQ8N6C7 128 aa11.18□□□□□ -0.62
R3HDM1-215ENST00000483021 NCR3O14931 201 aa11.16□□□□□ -0.62
R3HDM1-215ENST00000483021 SPRR1AP35321 89 aa11.16□□□□□ -0.62
R3HDM1-215ENST00000483021 MAP1LC3CQ9BXW4 147 aa11.16□□□□□ -0.62
R3HDM1-215ENST00000483021 PPDPFQ9H3Y8 114 aa11.16□□□□□ -0.62
R3HDM1-215ENST00000483021 KCNQ1DNQ9H478 68 aa11.16□□□□□ -0.62
R3HDM1-215ENST00000483021 HSBP1O75506 76 aa11.15□□□□□ -0.62
R3HDM1-215ENST00000483021 S100A12P80511 92 aa11.15□□□□□ -0.62
R3HDM1-215ENST00000483021 FP248Q71RG6 208 aaPredicted RBP11.15□□□□□ -0.62
R3HDM1-215ENST00000483021 YPEL4Q96NS1 127 aa11.15□□□□□ -0.62
R3HDM1-215ENST00000483021 NDUFA12Q9UI09 145 aa11.15□□□□□ -0.62
R3HDM1-215ENST00000483021 MYMXA0A1B0GTQ4 84 aa11.14□□□□□ -0.63
R3HDM1-215ENST00000483021 ETDCA0A1B0GVM5 59 aa11.14□□□□□ -0.63
R3HDM1-215ENST00000483021 KRTAP4-16G5E9R7 235 aaPredicted RBP11.12□□□□□ -0.63
R3HDM1-215ENST00000483021 SMCR5Q8TEV8 140 aa11.12□□□□□ -0.63
R3HDM1-215ENST00000483021 TRBV10-3A0A0K0K1G6 114 aa11.11□□□□□ -0.63
R3HDM1-215ENST00000483021 LCE2AQ5TA79 106 aaPredicted RBP11.11□□□□□ -0.63
R3HDM1-215ENST00000483021 Q8NBF4 154 aa11.11□□□□□ -0.63
R3HDM1-215ENST00000483021 FAM19A2Q8N3H0 131 aa11.1□□□□□ -0.63
R3HDM1-215ENST00000483021 H0Y8G0 127 aa11.08□□□□□ -0.64
R3HDM1-215ENST00000483021 SPINK1P00995 79 aa11.08□□□□□ -0.64
R3HDM1-215ENST00000483021 LINC00483Q53H64 154 aa11.08□□□□□ -0.64
R3HDM1-215ENST00000483021 DAND5Q8N907 189 aa11.08□□□□□ -0.64
R3HDM1-215ENST00000483021 LOC107984156A0A0G2JMH3 177 aa11.07□□□□□ -0.64
R3HDM1-215ENST00000483021 ARL17AQ8IVW1 177 aa11.07□□□□□ -0.64
R3HDM1-215ENST00000483021 TRBV10-2A0A0K0K1G8 114 aa11.06□□□□□ -0.64
R3HDM1-215ENST00000483021 LEPROTO15243 131 aa11.06□□□□□ -0.64
R3HDM1-215ENST00000483021 LEPROTL1O95214 131 aa11.06□□□□□ -0.64
R3HDM1-215ENST00000483021 PLNP26678 52 aa11.06□□□□□ -0.64
R3HDM1-215ENST00000483021 B5MCH6 92 aa11.05□□□□□ -0.64
R3HDM1-215ENST00000483021 DDTP30046 118 aa11.05□□□□□ -0.64
R3HDM1-215ENST00000483021 TSPEAR-AS2P59090 65 aa11.05□□□□□ -0.64
R3HDM1-215ENST00000483021 HERVK_113P61574 105 aa11.04□□□□□ -0.64
R3HDM1-215ENST00000483021 GAGE2AQ6NT46 116 aa11.04□□□□□ -0.64
R3HDM1-215ENST00000483021 MIEN1Q9BRT3 115 aa11.04□□□□□ -0.64
R3HDM1-215ENST00000483021 KRTAP9-2Q9BYQ4 174 aa11.04□□□□□ -0.64
R3HDM1-215ENST00000483021 NMUP48645 174 aa11.03□□□□□ -0.64
R3HDM1-215ENST00000483021 SPANXB1Q9NS25 103 aaPredicted RBP11.03□□□□□ -0.64
R3HDM1-215ENST00000483021 J3QQQ9 107 aa11.02□□□□□ -0.65
R3HDM1-215ENST00000483021 KRTAP13-3Q3SY46 172 aa11.02□□□□□ -0.65
R3HDM1-215ENST00000483021 SERF1AO75920 110 aa11.01□□□□□ -0.65
R3HDM1-215ENST00000483021 TRGC2P03986 189 aa11.01□□□□□ -0.65
R3HDM1-215ENST00000483021 RPS29P62273 56 aaKnown RBP11.01□□□□□ -0.65
R3HDM1-215ENST00000483021 Q6ZRX8 168 aa11.01□□□□□ -0.65
R3HDM1-215ENST00000483021 HSPB8Q9UJY1 196 aa11.01□□□□□ -0.65
R3HDM1-215ENST00000483021 DPM2O94777 84 aa11□□□□□ -0.65
R3HDM1-215ENST00000483021 NDUFC2O95298 119 aa11□□□□□ -0.65
R3HDM1-215ENST00000483021 SMCPP49901 116 aaPredicted RBP11□□□□□ -0.65
R3HDM1-215ENST00000483021 MOBPQ13875 183 aa11□□□□□ -0.65
R3HDM1-215ENST00000483021 SSBP3-AS1Q7Z2R9 100 aa11□□□□□ -0.65
R3HDM1-215ENST00000483021 IGLV9-49A0A0B4J1Y8 123 aa10.99□□□□□ -0.65
R3HDM1-215ENST00000483021 ERC2-IT1O76042 136 aa10.99□□□□□ -0.65
R3HDM1-215ENST00000483021 LGALS3P17931 250 aaKnown RBP10.99□□□□□ -0.65
R3HDM1-215ENST00000483021 S100A7L2Q5SY68 101 aa10.99□□□□□ -0.65
R3HDM1-215ENST00000483021 LINC00310P59036 64 aa10.98□□□□□ -0.65
R3HDM1-215ENST00000483021 Q9BRP9 147 aa10.98□□□□□ -0.65
R3HDM1-215ENST00000483021 IGLV6-57P01721 117 aa10.97□□□□□ -0.65
R3HDM1-215ENST00000483021 IGKCP01834 107 aa10.97□□□□□ -0.65
R3HDM1-215ENST00000483021 JOSD1Q15040 202 aaPredicted RBP10.97□□□□□ -0.65
R3HDM1-215ENST00000483021 ASB16-AS1Q495Z4 193 aa10.96□□□□□ -0.65
R3HDM1-215ENST00000483021 TRAV23DV6A0A075B6W5 121 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms