RNA–Protein interactions for RNA: ENST00000482714.5

CCM2-215, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-215ENST00000482714 PAM16Q9Y3D7 125 aa9.69□□□□□ -0.86
CCM2-215ENST00000482714 A0A0U1RRA0 63 aa9.68□□□□□ -0.86
CCM2-215ENST00000482714 A0A1W2PNN7 141 aa9.68□□□□□ -0.86
CCM2-215ENST00000482714 TMEM238C9JI98 176 aa9.67□□□□□ -0.86
CCM2-215ENST00000482714 COPS9Q8WXC6 57 aa9.67□□□□□ -0.86
CCM2-215ENST00000482714 TP73-AS1Q9UF72 201 aa9.67□□□□□ -0.86
CCM2-215ENST00000482714 LOC105371267A0A1B0GV96 52 aa9.66□□□□□ -0.86
CCM2-215ENST00000482714 LITAFQ99732 161 aa9.66□□□□□ -0.86
CCM2-215ENST00000482714 PPDPFQ9H3Y8 114 aa9.66□□□□□ -0.86
CCM2-215ENST00000482714 IGLV5-37A0A075B6J1 123 aa9.66□□□□□ -0.86
CCM2-215ENST00000482714 LBHQ53QV2 105 aaPredicted RBP9.66□□□□□ -0.86
CCM2-215ENST00000482714 ADAMTSL4-AS1Q5T5F5 129 aa9.66□□□□□ -0.86
CCM2-215ENST00000482714 MIEN1Q9BRT3 115 aa9.66□□□□□ -0.86
CCM2-215ENST00000482714 SMIM6P0DI80 62 aa9.65□□□□□ -0.87
CCM2-215ENST00000482714 IFITM1P13164 125 aa9.65□□□□□ -0.87
CCM2-215ENST00000482714 SPANXDQ9BXN6 97 aa9.65□□□□□ -0.87
CCM2-215ENST00000482714 SPANXCQ9NY87 97 aa9.65□□□□□ -0.87
CCM2-215ENST00000482714 C22orf24Q9Y442 160 aa9.64□□□□□ -0.87
CCM2-215ENST00000482714 PCLOQ9Y6V0 5065 aa9.63□□□□□ -0.87
CCM2-215ENST00000482714 FAM168BA1KXE4 195 aa9.63□□□□□ -0.87
CCM2-215ENST00000482714 NDUFC2O95298 119 aa9.63□□□□□ -0.87
CCM2-215ENST00000482714 SLC25A34Q6PIV7 304 aa9.63□□□□□ -0.87
CCM2-215ENST00000482714 KRTAP7-1Q8IUC3 87 aa9.63□□□□□ -0.87
CCM2-215ENST00000482714 C14orf144Q96I85 54 aa9.63□□□□□ -0.87
CCM2-215ENST00000482714 SPANXB1Q9NS25 103 aaPredicted RBP9.63□□□□□ -0.87
CCM2-215ENST00000482714 SERTAD4-AS1Q5TG53 156 aa9.62□□□□□ -0.87
CCM2-215ENST00000482714 FAM19A5Q7Z5A7 132 aaPredicted RBP9.62□□□□□ -0.87
CCM2-215ENST00000482714 LINC00308Q8TCZ7 52 aa9.62□□□□□ -0.87
CCM2-215ENST00000482714 C7orf33Q8WU49 177 aa9.62□□□□□ -0.87
CCM2-215ENST00000482714 VPREB1P12018 145 aa9.61□□□□□ -0.87
CCM2-215ENST00000482714 DAND5Q8N907 189 aa9.61□□□□□ -0.87
CCM2-215ENST00000482714 NKAPP1Q8N9T2 125 aa9.61□□□□□ -0.87
CCM2-215ENST00000482714 HIGD1BQ9P298 99 aa9.61□□□□□ -0.87
CCM2-215ENST00000482714 M0QXV9 152 aa9.6□□□□□ -0.87
CCM2-215ENST00000482714 MRPL55Q7Z7F7 128 aaKnown RBP9.6□□□□□ -0.87
CCM2-215ENST00000482714 ABCA13Q86UQ4 5058 aa9.6□□□□□ -0.87
CCM2-215ENST00000482714 TRBV10-2A0A0K0K1G8 114 aa9.59□□□□□ -0.87
CCM2-215ENST00000482714 FAM229AH3BQW9 127 aa9.59□□□□□ -0.87
CCM2-215ENST00000482714 HAMPP81172 84 aa9.59□□□□□ -0.87
CCM2-215ENST00000482714 SRSF9Q13242 221 aaKnown RBP eCLIP9.59□□□□□ -0.87
CCM2-215ENST00000482714 M0R378 163 aa9.59□□□□□ -0.87
CCM2-215ENST00000482714 PHF5AQ7RTV0 110 aaKnown RBP9.59□□□□□ -0.87
CCM2-215ENST00000482714 LINC00518Q8N0U6 118 aa9.59□□□□□ -0.87
CCM2-215ENST00000482714 SOSTDC1Q6X4U4 206 aa9.58□□□□□ -0.88
CCM2-215ENST00000482714 Q8N1X5 172 aa9.58□□□□□ -0.88
CCM2-215ENST00000482714 SMR3BP02814 79 aaPredicted RBP9.57□□□□□ -0.88
CCM2-215ENST00000482714 LINC00528Q8N1L1 170 aa9.57□□□□□ -0.88
CCM2-215ENST00000482714 LINC00167Q96N53 147 aa9.57□□□□□ -0.88
CCM2-215ENST00000482714 MUSTN1Q8IVN3 82 aa9.56□□□□□ -0.88
CCM2-215ENST00000482714 UQCR10Q9UDW1 63 aa9.56□□□□□ -0.88
CCM2-215ENST00000482714 FAT1Q14517 4588 aa9.56□□□□□ -0.88
CCM2-215ENST00000482714 PLA2G1BP04054 148 aaKnown RBP9.55□□□□□ -0.88
CCM2-215ENST00000482714 UBE2BP63146 152 aa9.55□□□□□ -0.88
CCM2-215ENST00000482714 TAL2Q16559 108 aa9.55□□□□□ -0.88
CCM2-215ENST00000482714 KRTAP17-1Q9BYP8 105 aa9.55□□□□□ -0.88
CCM2-215ENST00000482714 VPS13BQ7Z7G8 4022 aa9.55□□□□□ -0.88
CCM2-215ENST00000482714 EIF4EBP3O60516 100 aaPredicted RBP9.54□□□□□ -0.88
CCM2-215ENST00000482714 Q8NDZ9 215 aa9.54□□□□□ -0.88
CCM2-215ENST00000482714 IGLV1-50A0A075B6I6 118 aa9.53□□□□□ -0.88
CCM2-215ENST00000482714 NPC2P61916 151 aa9.53□□□□□ -0.88
CCM2-215ENST00000482714 HIST1H4GQ99525 98 aa9.53□□□□□ -0.88
CCM2-215ENST00000482714 CBY1Q9Y3M2 126 aa9.53□□□□□ -0.88
CCM2-215ENST00000482714 PRR3P79522 188 aaKnown RBP9.53□□□□□ -0.88
CCM2-215ENST00000482714 C2orf91Q6ZV80 131 aa9.53□□□□□ -0.88
CCM2-215ENST00000482714 RPL37AP61513 92 aaKnown RBP9.51□□□□□ -0.89
CCM2-215ENST00000482714 KRTAP4-5Q9BYR2 181 aa9.51□□□□□ -0.89
CCM2-215ENST00000482714 TMEM126AQ9H061 195 aa9.51□□□□□ -0.89
CCM2-215ENST00000482714 PSORS1C2Q9UIG4 136 aa9.51□□□□□ -0.89
CCM2-215ENST00000482714 GAGE10A6NGK3 116 aa9.5□□□□□ -0.89
CCM2-215ENST00000482714 C12orf57Q99622 126 aa9.5□□□□□ -0.89
CCM2-215ENST00000482714 RPL37AP8A6NKH3 93 aa9.49□□□□□ -0.89
CCM2-215ENST00000482714 IGLV6-57P01721 117 aa9.49□□□□□ -0.89
CCM2-215ENST00000482714 S100A7L2Q5SY68 101 aa9.49□□□□□ -0.89
CCM2-215ENST00000482714 Q5VSD8 79 aa9.49□□□□□ -0.89
CCM2-215ENST00000482714 KCNQ1DNQ9H478 68 aa9.49□□□□□ -0.89
CCM2-215ENST00000482714 IGKV2-28A0A075B6P5 120 aa9.48□□□□□ -0.89
CCM2-215ENST00000482714 NCR3O14931 201 aa9.48□□□□□ -0.89
CCM2-215ENST00000482714 IGKV2D-28P01615 120 aa9.48□□□□□ -0.89
CCM2-215ENST00000482714 DDTP30046 118 aa9.48□□□□□ -0.89
CCM2-215ENST00000482714 TRAV13-2A0A0B4J235 113 aa9.47□□□□□ -0.89
CCM2-215ENST00000482714 KRTAP11-1Q8IUC1 163 aa9.47□□□□□ -0.89
CCM2-215ENST00000482714 TRBV10-3A0A0K0K1G6 114 aa9.47□□□□□ -0.89
CCM2-215ENST00000482714 A4D1N5 150 aa9.47□□□□□ -0.89
CCM2-215ENST00000482714 C1orf137Q5JT78 98 aa9.47□□□□□ -0.89
CCM2-215ENST00000482714 TSTD3H0UI37 97 aa9.46□□□□□ -0.9
CCM2-215ENST00000482714 PRYO14603 147 aa9.46□□□□□ -0.9
CCM2-215ENST00000482714 KRTAP10-4P60372 401 aaPredicted RBP9.46□□□□□ -0.9
CCM2-215ENST00000482714 HSD52Q0P140 79 aa9.46□□□□□ -0.9
CCM2-215ENST00000482714 REG3GQ6UW15 175 aa9.46□□□□□ -0.9
CCM2-215ENST00000482714 CEND1Q8N111 149 aa9.46□□□□□ -0.9
CCM2-215ENST00000482714 TMEM238LA0A1B0GVL6 79 aa9.45□□□□□ -0.9
CCM2-215ENST00000482714 A6NJY4 79 aa9.45□□□□□ -0.9
CCM2-215ENST00000482714 BCE1O60756 84 aa9.45□□□□□ -0.9
CCM2-215ENST00000482714 HNRNPA3P51991 378 aaKnown RBP9.45□□□□□ -0.9
CCM2-215ENST00000482714 SPRR1AP35321 89 aa9.44□□□□□ -0.9
CCM2-215ENST00000482714 LINC00337Q8N6G1 96 aa9.44□□□□□ -0.9
CCM2-215ENST00000482714 OR13C6PQ8NH95 151 aa9.44□□□□□ -0.9
CCM2-215ENST00000482714 PRO1933Q9H354 126 aa9.44□□□□□ -0.9
CCM2-215ENST00000482714 IGLV7-43P04211 117 aa9.43□□□□□ -0.9
CCM2-215ENST00000482714 TRAV23DV6A0A075B6W5 121 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms