RNA–Protein interactions for RNA: ENST00000480562.3

ABCF3-214, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 1 (best)

Gene ABCF3, Length 1,182 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-214ENST00000480562 RHEBQ15382 184 aa10.9□□□□□ -0.66
ABCF3-214ENST00000480562 TMEM170BQ5T4T1 132 aa10.9□□□□□ -0.66
ABCF3-214ENST00000480562 FAT4Q6V0I7 4981 aa10.89□□□□□ -0.67
ABCF3-214ENST00000480562 C10orf91Q5T1B1 145 aa10.89□□□□□ -0.67
ABCF3-214ENST00000480562 CBLN2Q8IUK8 224 aa10.88□□□□□ -0.67
ABCF3-214ENST00000480562 C3orf22Q8N5N4 141 aa10.88□□□□□ -0.67
ABCF3-214ENST00000480562 PLEKHB2Q96CS7 222 aa10.88□□□□□ -0.67
ABCF3-214ENST00000480562 A0A0U1RRA0 63 aa10.86□□□□□ -0.67
ABCF3-214ENST00000480562 LINC00158P58513 81 aa10.86□□□□□ -0.67
ABCF3-214ENST00000480562 HIGD2AQ9BW72 106 aa10.86□□□□□ -0.67
ABCF3-214ENST00000480562 IGLV7-46A0A075B6I9 117 aa10.85□□□□□ -0.67
ABCF3-214ENST00000480562 SFTA2Q6UW10 78 aa10.85□□□□□ -0.67
ABCF3-214ENST00000480562 CDIP1Q9H305 208 aa10.85□□□□□ -0.67
ABCF3-214ENST00000480562 CHTOPQ9Y3Y2 248 aaKnown RBP10.84□□□□□ -0.67
ABCF3-214ENST00000480562 TPRXLQ17RH7 258 aa10.83□□□□□ -0.68
ABCF3-214ENST00000480562 TMEM223A0PJW6 202 aa10.8□□□□□ -0.68
ABCF3-214ENST00000480562 SPRR4Q96PI1 79 aa10.8□□□□□ -0.68
ABCF3-214ENST00000480562 SMIM13P0DJ93 91 aa10.79□□□□□ -0.68
ABCF3-214ENST00000480562 CTAG1AP78358 180 aa10.79□□□□□ -0.68
ABCF3-214ENST00000480562 APOC3P02656 99 aa10.78□□□□□ -0.68
ABCF3-214ENST00000480562 LCE2AQ5TA79 106 aaPredicted RBP10.78□□□□□ -0.68
ABCF3-214ENST00000480562 PPDPFQ9H3Y8 114 aa10.78□□□□□ -0.68
ABCF3-214ENST00000480562 BOD1L2Q8IYS8 172 aa10.77□□□□□ -0.69
ABCF3-214ENST00000480562 NCR3O14931 201 aa10.76□□□□□ -0.69
ABCF3-214ENST00000480562 ATP6V1G1O75348 118 aa10.76□□□□□ -0.69
ABCF3-214ENST00000480562 SPAG11AQ6PDA7 123 aa10.76□□□□□ -0.69
ABCF3-214ENST00000480562 IFI27L1Q96BM0 104 aa10.76□□□□□ -0.69
ABCF3-214ENST00000480562 KRTAP9-2Q9BYQ4 174 aa10.76□□□□□ -0.69
ABCF3-214ENST00000480562 TRAV12-1A0A0B4J245 112 aa10.75□□□□□ -0.69
ABCF3-214ENST00000480562 SNAPINO95295 136 aa10.75□□□□□ -0.69
ABCF3-214ENST00000480562 MEIG1Q5JSS6 88 aa10.75□□□□□ -0.69
ABCF3-214ENST00000480562 PRYO14603 147 aa10.74□□□□□ -0.69
ABCF3-214ENST00000480562 NDUFA5Q16718 116 aa10.74□□□□□ -0.69
ABCF3-214ENST00000480562 MIR7-3HGQ8N6C7 128 aa10.74□□□□□ -0.69
ABCF3-214ENST00000480562 DAND5Q8N907 189 aa10.74□□□□□ -0.69
ABCF3-214ENST00000480562 ZNF706Q9Y5V0 76 aaPredicted RBP10.74□□□□□ -0.69
ABCF3-214ENST00000480562 SVBPQ8N300 66 aa10.73□□□□□ -0.69
ABCF3-214ENST00000480562 SMCR5Q8TEV8 140 aa10.73□□□□□ -0.69
ABCF3-214ENST00000480562 CHCHD1Q96BP2 118 aaKnown RBP10.73□□□□□ -0.69
ABCF3-214ENST00000480562 C4orf48Q5BLP8 95 aa10.72□□□□□ -0.69
ABCF3-214ENST00000480562 Q8NBF4 154 aa10.72□□□□□ -0.69
ABCF3-214ENST00000480562 SPRR1AP35321 89 aa10.71□□□□□ -0.69
ABCF3-214ENST00000480562 LINC00337Q8N6G1 96 aa10.71□□□□□ -0.69
ABCF3-214ENST00000480562 KCNQ1DNQ9H478 68 aa10.71□□□□□ -0.69
ABCF3-214ENST00000480562 TRBV10-3A0A0K0K1G6 114 aa10.7□□□□□ -0.7
ABCF3-214ENST00000480562 ETDCA0A1B0GVM5 59 aa10.7□□□□□ -0.7
ABCF3-214ENST00000480562 HERV-K104P63124 156 aa10.7□□□□□ -0.7
ABCF3-214ENST00000480562 NDUFA12Q9UI09 145 aa10.7□□□□□ -0.7
ABCF3-214ENST00000480562 KRTAP4-16G5E9R7 235 aaPredicted RBP10.69□□□□□ -0.7
ABCF3-214ENST00000480562 FAM19A2Q8N3H0 131 aa10.69□□□□□ -0.7
ABCF3-214ENST00000480562 YPEL4Q96NS1 127 aa10.69□□□□□ -0.7
ABCF3-214ENST00000480562 FP248Q71RG6 208 aaPredicted RBP10.68□□□□□ -0.7
ABCF3-214ENST00000480562 H0Y8G0 127 aa10.67□□□□□ -0.7
ABCF3-214ENST00000480562 MYMXA0A1B0GTQ4 84 aa10.66□□□□□ -0.7
ABCF3-214ENST00000480562 HSBP1O75506 76 aa10.66□□□□□ -0.7
ABCF3-214ENST00000480562 LINC00587B1AMM8 73 aa10.65□□□□□ -0.7
ABCF3-214ENST00000480562 TSPEAR-AS2P59090 65 aa10.65□□□□□ -0.7
ABCF3-214ENST00000480562 GAGE2AQ6NT46 116 aa10.65□□□□□ -0.7
ABCF3-214ENST00000480562 KRTAP13-3Q3SY46 172 aa10.64□□□□□ -0.71
ABCF3-214ENST00000480562 LINC00483Q53H64 154 aa10.64□□□□□ -0.71
ABCF3-214ENST00000480562 MAP1LC3CQ9BXW4 147 aa10.64□□□□□ -0.71
ABCF3-214ENST00000480562 B5MCH6 92 aa10.63□□□□□ -0.71
ABCF3-214ENST00000480562 ERC2-IT1O76042 136 aa10.63□□□□□ -0.71
ABCF3-214ENST00000480562 SPINK1P00995 79 aa10.62□□□□□ -0.71
ABCF3-214ENST00000480562 S100A12P80511 92 aa10.61□□□□□ -0.71
ABCF3-214ENST00000480562 IGLV9-49A0A0B4J1Y8 123 aa10.6□□□□□ -0.71
ABCF3-214ENST00000480562 LEPROTO15243 131 aa10.6□□□□□ -0.71
ABCF3-214ENST00000480562 DDTP30046 118 aa10.6□□□□□ -0.71
ABCF3-214ENST00000480562 MOBPQ13875 183 aa10.6□□□□□ -0.71
ABCF3-214ENST00000480562 LOC107984156A0A0G2JMH3 177 aa10.59□□□□□ -0.71
ABCF3-214ENST00000480562 ARL17AQ8IVW1 177 aa10.59□□□□□ -0.71
ABCF3-214ENST00000480562 Q9BRP9 147 aa10.59□□□□□ -0.71
ABCF3-214ENST00000480562 LEPROTL1O95214 131 aa10.58□□□□□ -0.72
ABCF3-214ENST00000480562 TRBV10-2A0A0K0K1G8 114 aa10.57□□□□□ -0.72
ABCF3-214ENST00000480562 LINC00310P59036 64 aa10.57□□□□□ -0.72
ABCF3-214ENST00000480562 ASB16-AS1Q495Z4 193 aa10.57□□□□□ -0.72
ABCF3-214ENST00000480562 J3QQQ9 107 aa10.56□□□□□ -0.72
ABCF3-214ENST00000480562 SERF1AO75920 110 aa10.56□□□□□ -0.72
ABCF3-214ENST00000480562 TRGC2P03986 189 aa10.56□□□□□ -0.72
ABCF3-214ENST00000480562 PLNP26678 52 aa10.55□□□□□ -0.72
ABCF3-214ENST00000480562 Q6ZRX8 168 aa10.55□□□□□ -0.72
ABCF3-214ENST00000480562 SSBP3-AS1Q7Z2R9 100 aa10.55□□□□□ -0.72
ABCF3-214ENST00000480562 PMCHL2Q9BQD1 86 aa10.55□□□□□ -0.72
ABCF3-214ENST00000480562 SPANXB1Q9NS25 103 aaPredicted RBP10.55□□□□□ -0.72
ABCF3-214ENST00000480562 Q8N377 158 aa10.54□□□□□ -0.72
ABCF3-214ENST00000480562 MIEN1Q9BRT3 115 aa10.54□□□□□ -0.72
ABCF3-214ENST00000480562 KRTAP4-1Q9BYQ7 146 aa10.54□□□□□ -0.72
ABCF3-214ENST00000480562 DPM2O94777 84 aa10.53□□□□□ -0.72
ABCF3-214ENST00000480562 FABP4P15090 132 aa10.53□□□□□ -0.72
ABCF3-214ENST00000480562 HERVK_113P61574 105 aa10.53□□□□□ -0.72
ABCF3-214ENST00000480562 S100A7L2Q5SY68 101 aa10.53□□□□□ -0.72
ABCF3-214ENST00000480562 IGLV6-57P01721 117 aa10.52□□□□□ -0.73
ABCF3-214ENST00000480562 LGALS3P17931 250 aaKnown RBP10.52□□□□□ -0.73
ABCF3-214ENST00000480562 NMUP48645 174 aa10.51□□□□□ -0.73
ABCF3-214ENST00000480562 NPC2P61916 151 aa10.51□□□□□ -0.73
ABCF3-214ENST00000480562 RPS29P62273 56 aaKnown RBP10.51□□□□□ -0.73
ABCF3-214ENST00000480562 HSPB8Q9UJY1 196 aa10.51□□□□□ -0.73
ABCF3-214ENST00000480562 EIF4EBP3O60516 100 aaPredicted RBP10.5□□□□□ -0.73
ABCF3-214ENST00000480562 NDUFC2O95298 119 aa10.5□□□□□ -0.73
ABCF3-214ENST00000480562 IGKCP01834 107 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms