RNA–Protein interactions for RNA: ENST00000479135.5

EWSR1-216, Transcript of EWS RNA binding protein 1, humanhuman

TSL 1 (best)

Gene EWSR1, Length 7,285 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-216ENST00000479135 NUP210Q8TEM1 1887 aaPredicted RBP7.59□□□□□ -1.19
EWSR1-216ENST00000479135 Q8N2B8 174 aa7.59□□□□□ -1.2
EWSR1-216ENST00000479135 TANC1Q9C0D5 1861 aa7.58□□□□□ -1.2
EWSR1-216ENST00000479135 KIAA1671Q9BY89 1806 aa7.58□□□□□ -1.2
EWSR1-216ENST00000479135 F8WDY8 70 aa7.58□□□□□ -1.2
EWSR1-216ENST00000479135 RTL8CO15255 209 aa7.57□□□□□ -1.2
EWSR1-216ENST00000479135 BRWD1-AS2P59051 145 aa7.57□□□□□ -1.2
EWSR1-216ENST00000479135 MRPL34Q9BQ48 92 aaKnown RBP7.57□□□□□ -1.2
EWSR1-216ENST00000479135 PLXNB3Q9ULL4 1909 aa7.57□□□□□ -1.2
EWSR1-216ENST00000479135 ALPK3Q96L96 1907 aa7.56□□□□□ -1.2
EWSR1-216ENST00000479135 C11orf72Q8NBR9 251 aa7.56□□□□□ -1.2
EWSR1-216ENST00000479135 Q8NBF4 154 aa7.55□□□□□ -1.2
EWSR1-216ENST00000479135 FAM168BA1KXE4 195 aa7.55□□□□□ -1.2
EWSR1-216ENST00000479135 LMO4P61968 165 aa7.54□□□□□ -1.2
EWSR1-216ENST00000479135 KLLNB2CW77 178 aa7.53□□□□□ -1.2
EWSR1-216ENST00000479135 LRP4O75096 1905 aa7.53□□□□□ -1.2
EWSR1-216ENST00000479135 URB1-AS1Q96HZ7 61 aa7.53□□□□□ -1.2
EWSR1-216ENST00000479135 CSAG1Q6PB30 78 aa7.52□□□□□ -1.2
EWSR1-216ENST00000479135 SPG11Q96JI7 2443 aa7.52□□□□□ -1.21
EWSR1-216ENST00000479135 H3BPC8 53 aa7.52□□□□□ -1.21
EWSR1-216ENST00000479135 H1FX-AS1Q4G0G2 97 aa7.52□□□□□ -1.21
EWSR1-216ENST00000479135 PIP4P1Q86T03 277 aa7.52□□□□□ -1.21
EWSR1-216ENST00000479135 IGLV1-50A0A075B6I6 118 aa7.52□□□□□ -1.21
EWSR1-216ENST00000479135 ANAPC11Q9NYG5 84 aa7.52□□□□□ -1.21
EWSR1-216ENST00000479135 ELOF1P60002 83 aaKnown RBP7.51□□□□□ -1.21
EWSR1-216ENST00000479135 SMR3BP02814 79 aaPredicted RBP7.51□□□□□ -1.21
EWSR1-216ENST00000479135 RAI1Q7Z5J4 1906 aaPredicted RBP7.51□□□□□ -1.21
EWSR1-216ENST00000479135 A8MWP4 228 aa7.5□□□□□ -1.21
EWSR1-216ENST00000479135 SMCPP49901 116 aaPredicted RBP7.5□□□□□ -1.21
EWSR1-216ENST00000479135 FAM104AQ969W3 186 aa7.49□□□□□ -1.21
EWSR1-216ENST00000479135 IGLV1-51P01701 117 aa7.49□□□□□ -1.21
EWSR1-216ENST00000479135 PSMG3-AS1Q96PY0 264 aa7.49□□□□□ -1.21
EWSR1-216ENST00000479135 FAM208BQ5VWN6 2430 aa7.48□□□□□ -1.21
EWSR1-216ENST00000479135 LINC00310P59036 64 aa7.47□□□□□ -1.21
EWSR1-216ENST00000479135 CACNA1HO95180 2353 aa7.47□□□□□ -1.21
EWSR1-216ENST00000479135 AMELXQ99217 191 aa7.47□□□□□ -1.21
EWSR1-216ENST00000479135 ODF3L2Q3SX64 289 aa7.47□□□□□ -1.21
EWSR1-216ENST00000479135 Q8NA96 180 aa7.47□□□□□ -1.21
EWSR1-216ENST00000479135 LINC00574Q9H8X3 128 aa7.47□□□□□ -1.21
EWSR1-216ENST00000479135 C9orf163Q8N9P6 203 aa7.46□□□□□ -1.22
EWSR1-216ENST00000479135 Q6ZRP5 223 aa7.46□□□□□ -1.22
EWSR1-216ENST00000479135 PRR15Q8IV56 129 aa7.46□□□□□ -1.22
EWSR1-216ENST00000479135 DOPEY1Q5JWR5 2465 aa7.45□□□□□ -1.22
EWSR1-216ENST00000479135 CREBBPQ92793 2442 aa7.44□□□□□ -1.22
EWSR1-216ENST00000479135 CDSNQ15517 529 aa7.43□□□□□ -1.22
EWSR1-216ENST00000479135 Q6ZRX8 168 aa7.43□□□□□ -1.22
EWSR1-216ENST00000479135 IGLV1-40P01703 118 aa7.43□□□□□ -1.22
EWSR1-216ENST00000479135 KIF26AQ9ULI4 1882 aaPredicted RBP7.43□□□□□ -1.22
EWSR1-216ENST00000479135 LINC00315P59091 139 aa7.42□□□□□ -1.22
EWSR1-216ENST00000479135 SRCAPQ6ZRS2 3230 aa7.41□□□□□ -1.22
EWSR1-216ENST00000479135 NOTCH4Q99466 2003 aa7.41□□□□□ -1.22
EWSR1-216ENST00000479135 KIF25-AS1Q9Y6Z4 181 aa7.4□□□□□ -1.22
EWSR1-216ENST00000479135 MUC22E2RYF6 1773 aaPredicted RBP7.4□□□□□ -1.23
EWSR1-216ENST00000479135 LINC00304Q8N9R0 145 aa7.39□□□□□ -1.23
EWSR1-216ENST00000479135 COL5A1P20908 1838 aaPredicted RBP7.39□□□□□ -1.23
EWSR1-216ENST00000479135 PRR26Q8N8Z3 221 aa7.38□□□□□ -1.23
EWSR1-216ENST00000479135 KRTAP16-1A8MUX0 517 aa7.38□□□□□ -1.23
EWSR1-216ENST00000479135 FHL3Q13643 280 aa7.38□□□□□ -1.23
EWSR1-216ENST00000479135 BCE1O60756 84 aa7.37□□□□□ -1.23
EWSR1-216ENST00000479135 LOC110117498A0A087WWA1 95 aa7.37□□□□□ -1.23
EWSR1-216ENST00000479135 A0A1B0GUV1 79 aa7.37□□□□□ -1.23
EWSR1-216ENST00000479135 AVPP01185 164 aa7.36□□□□□ -1.23
EWSR1-216ENST00000479135 A0A096LNJ9 63 aa7.35□□□□□ -1.23
EWSR1-216ENST00000479135 A0A1B0GU33 70 aa7.35□□□□□ -1.23
EWSR1-216ENST00000479135 IGFL1Q6UW32 110 aa7.35□□□□□ -1.23
EWSR1-216ENST00000479135 ABCA2Q9BZC7 2435 aa7.35□□□□□ -1.23
EWSR1-216ENST00000479135 RIF1Q5UIP0 2472 aaKnown RBP7.34□□□□□ -1.23
EWSR1-216ENST00000479135 KIAA1549LQ6ZVL6 1849 aa7.34□□□□□ -1.23
EWSR1-216ENST00000479135 HIVEP2P31629 2446 aa7.34□□□□□ -1.23
EWSR1-216ENST00000479135 A0A1B0GVX0 72 aa7.33□□□□□ -1.24
EWSR1-216ENST00000479135 TTC28Q96AY4 2481 aa7.32□□□□□ -1.24
EWSR1-216ENST00000479135 LTBP2Q14767 1821 aa7.32□□□□□ -1.24
EWSR1-216ENST00000479135 A0A1W2PNU3 283 aaPredicted RBP7.32□□□□□ -1.24
EWSR1-216ENST00000479135 IGHV3OR16-9A0A0B4J2B5 98 aa7.32□□□□□ -1.24
EWSR1-216ENST00000479135 KLK9Q2XQG4 91 aa7.31□□□□□ -1.24
EWSR1-216ENST00000479135 DNAH10OSP0CZ25 163 aa7.31□□□□□ -1.24
EWSR1-216ENST00000479135 PTPRSQ13332 1948 aa7.29□□□□□ -1.24
EWSR1-216ENST00000479135 PTPRBP23467 1997 aa7.29□□□□□ -1.24
EWSR1-216ENST00000479135 H7BZZ5 65 aa7.29□□□□□ -1.24
EWSR1-216ENST00000479135 CNFNQ9BYD5 112 aa7.29□□□□□ -1.24
EWSR1-216ENST00000479135 Q6ZSA8 131 aa7.28□□□□□ -1.24
EWSR1-216ENST00000479135 KRTAP10-9P60411 292 aa7.27□□□□□ -1.25
EWSR1-216ENST00000479135 PRO0461Q9UI25 63 aa7.27□□□□□ -1.25
EWSR1-216ENST00000479135 SONP18583 2426 aaKnown RBP7.27□□□□□ -1.25
EWSR1-216ENST00000479135 C15orf56Q8N910 161 aa7.27□□□□□ -1.25
EWSR1-216ENST00000479135 PTPN13Q12923 2485 aa7.27□□□□□ -1.25
EWSR1-216ENST00000479135 C20orf166-AS1Q96NR2 134 aa7.26□□□□□ -1.25
EWSR1-216ENST00000479135 DMAC1Q96GE9 116 aa7.26□□□□□ -1.25
EWSR1-216ENST00000479135 ROMO1P60602 79 aa7.26□□□□□ -1.25
EWSR1-216ENST00000479135 FAM229BQ4G0N7 80 aa7.26□□□□□ -1.25
EWSR1-216ENST00000479135 NBDYA0A0U1RRE5 68 aa7.24□□□□□ -1.25
EWSR1-216ENST00000479135 ANKHD1Q8IWZ3 2542 aaKnown RBP7.23□□□□□ -1.25
EWSR1-216ENST00000479135 F8P00451 2351 aa7.22□□□□□ -1.25
EWSR1-216ENST00000479135 COX8CQ7Z4L0 72 aa7.21□□□□□ -1.25
EWSR1-216ENST00000479135 Q8N9P0 234 aaPredicted RBP7.21□□□□□ -1.25
EWSR1-216ENST00000479135 S4R3F8 94 aa7.2□□□□□ -1.26
EWSR1-216ENST00000479135 MYO9AB2RTY4 2548 aa7.2□□□□□ -1.26
EWSR1-216ENST00000479135 FP248Q71RG6 208 aaPredicted RBP7.18□□□□□ -1.26
EWSR1-216ENST00000479135 HIVEP3Q5T1R4 2406 aa7.18□□□□□ -1.26
EWSR1-216ENST00000479135 KLKP1Q107X0 134 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms