RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 ADCYAP1P18509 176 aa11.14□□□□□ -0.63
PDLIM1-202ENST00000477757 MRPL18Q9H0U6 180 aaKnown RBP11.14□□□□□ -0.63
PDLIM1-202ENST00000477757 KRTAP9-7A8MTY7 169 aa11.13□□□□□ -0.63
PDLIM1-202ENST00000477757 SLC25A20O43772 301 aa11.13□□□□□ -0.63
PDLIM1-202ENST00000477757 COX17Q14061 63 aa11.13□□□□□ -0.63
PDLIM1-202ENST00000477757 LINC00483Q53H64 154 aa11.13□□□□□ -0.63
PDLIM1-202ENST00000477757 CST9LQ9H4G1 147 aa11.13□□□□□ -0.63
PDLIM1-202ENST00000477757 IGLV5-39A0A0G2JS06 123 aa11.12□□□□□ -0.63
PDLIM1-202ENST00000477757 H3BRM9 83 aa11.12□□□□□ -0.63
PDLIM1-202ENST00000477757 PEA15Q15121 130 aa11.11□□□□□ -0.63
PDLIM1-202ENST00000477757 AKAP14Q86UN6 197 aa11.1□□□□□ -0.63
PDLIM1-202ENST00000477757 MOBPQ13875 183 aa11.08□□□□□ -0.64
PDLIM1-202ENST00000477757 KRTAP3-3Q9BYR6 98 aa11.08□□□□□ -0.64
PDLIM1-202ENST00000477757 KRTAP3-2Q9BYR7 98 aa11.08□□□□□ -0.64
PDLIM1-202ENST00000477757 IGLV8-61A0A075B6I0 122 aa11.07□□□□□ -0.64
PDLIM1-202ENST00000477757 KRTAP9-1A8MXZ3 250 aaPredicted RBP11.07□□□□□ -0.64
PDLIM1-202ENST00000477757 PRYO14603 147 aa11.07□□□□□ -0.64
PDLIM1-202ENST00000477757 PMVKQ15126 192 aa11.07□□□□□ -0.64
PDLIM1-202ENST00000477757 PCOTHQ58A44 107 aa11.07□□□□□ -0.64
PDLIM1-202ENST00000477757 SMCR5Q8TEV8 140 aa11.07□□□□□ -0.64
PDLIM1-202ENST00000477757 LINC01549A6NIU2 74 aa11.06□□□□□ -0.64
PDLIM1-202ENST00000477757 SPRR1AP35321 89 aa11.05□□□□□ -0.64
PDLIM1-202ENST00000477757 SSBP3-AS1Q7Z2R9 100 aa11.05□□□□□ -0.64
PDLIM1-202ENST00000477757 ZNF625Q96I27 306 aaPredicted RBP11.05□□□□□ -0.64
PDLIM1-202ENST00000477757 IGLV9-49A0A0B4J1Y8 123 aa11.04□□□□□ -0.64
PDLIM1-202ENST00000477757 KRTAP4-16G5E9R7 235 aaPredicted RBP11.03□□□□□ -0.64
PDLIM1-202ENST00000477757 IGLC3P0DOY3 106 aa11.02□□□□□ -0.65
PDLIM1-202ENST00000477757 GAGE2AQ6NT46 116 aa11.02□□□□□ -0.65
PDLIM1-202ENST00000477757 FLGP20930 4061 aaPredicted RBP11.02□□□□□ -0.65
PDLIM1-202ENST00000477757 M0R2T5 61 aa11.01□□□□□ -0.65
PDLIM1-202ENST00000477757 SFTA2Q6UW10 78 aa11.01□□□□□ -0.65
PDLIM1-202ENST00000477757 KCNQ1DNQ9H478 68 aa11.01□□□□□ -0.65
PDLIM1-202ENST00000477757 ETDCA0A1B0GVM5 59 aa11□□□□□ -0.65
PDLIM1-202ENST00000477757 LINC01546A6NGU7 62 aa11□□□□□ -0.65
PDLIM1-202ENST00000477757 ZNF22P17026 224 aaPredicted RBP11□□□□□ -0.65
PDLIM1-202ENST00000477757 KIAA1644Q3SXP7 199 aa10.97□□□□□ -0.65
PDLIM1-202ENST00000477757 ANAPC16Q96DE5 110 aa10.97□□□□□ -0.65
PDLIM1-202ENST00000477757 MT-ND4LP03901 98 aa10.96□□□□□ -0.65
PDLIM1-202ENST00000477757 LINC00158P58513 81 aa10.95□□□□□ -0.66
PDLIM1-202ENST00000477757 SSPOA2VEC9 5147 aa10.94□□□□□ -0.66
PDLIM1-202ENST00000477757 NCR3O14931 201 aa10.94□□□□□ -0.66
PDLIM1-202ENST00000477757 ERC2-IT1O76042 136 aa10.94□□□□□ -0.66
PDLIM1-202ENST00000477757 BOD1L2Q8IYS8 172 aa10.92□□□□□ -0.66
PDLIM1-202ENST00000477757 B5MCH6 92 aa10.91□□□□□ -0.66
PDLIM1-202ENST00000477757 USH2AO75445 5202 aa10.9□□□□□ -0.66
PDLIM1-202ENST00000477757 TRBV10-3A0A0K0K1G6 114 aa10.9□□□□□ -0.66
PDLIM1-202ENST00000477757 A0A0U1RRA0 63 aa10.9□□□□□ -0.66
PDLIM1-202ENST00000477757 C9orf92A6NGG3 77 aa10.89□□□□□ -0.67
PDLIM1-202ENST00000477757 NDUFA6P56556 154 aa10.89□□□□□ -0.67
PDLIM1-202ENST00000477757 C9orf153Q5TBE3 101 aa10.89□□□□□ -0.67
PDLIM1-202ENST00000477757 C11orf86A6NJI1 115 aa10.88□□□□□ -0.67
PDLIM1-202ENST00000477757 COX6B2Q6YFQ2 88 aa10.88□□□□□ -0.67
PDLIM1-202ENST00000477757 Q9BRP9 147 aa10.88□□□□□ -0.67
PDLIM1-202ENST00000477757 hCG_2014768A0A024R1R8 64 aa10.87□□□□□ -0.67
PDLIM1-202ENST00000477757 FA2HQ7L5A8 372 aa10.87□□□□□ -0.67
PDLIM1-202ENST00000477757 TRAV9-1A0A075B6T8 112 aa10.86□□□□□ -0.67
PDLIM1-202ENST00000477757 TMEM170BQ5T4T1 132 aa10.86□□□□□ -0.67
PDLIM1-202ENST00000477757 SMCO4Q9NRQ5 59 aa10.86□□□□□ -0.67
PDLIM1-202ENST00000477757 S100A12P80511 92 aa10.85□□□□□ -0.67
PDLIM1-202ENST00000477757 Q6ZRX8 168 aa10.85□□□□□ -0.67
PDLIM1-202ENST00000477757 A0A096LNJ9 63 aa10.84□□□□□ -0.67
PDLIM1-202ENST00000477757 SMIM13P0DJ93 91 aa10.84□□□□□ -0.67
PDLIM1-202ENST00000477757 LIMD2Q9BT23 127 aa10.84□□□□□ -0.67
PDLIM1-202ENST00000477757 ATP6V1G1O75348 118 aa10.83□□□□□ -0.68
PDLIM1-202ENST00000477757 MIR7-3HGQ8N6C7 128 aa10.82□□□□□ -0.68
PDLIM1-202ENST00000477757 IGLV6-57P01721 117 aa10.79□□□□□ -0.68
PDLIM1-202ENST00000477757 MEIG1Q5JSS6 88 aa10.78□□□□□ -0.68
PDLIM1-202ENST00000477757 DDTP30046 118 aa10.77□□□□□ -0.69
PDLIM1-202ENST00000477757 BAGE3Q86Y29 109 aa10.77□□□□□ -0.69
PDLIM1-202ENST00000477757 TMEM223A0PJW6 202 aa10.76□□□□□ -0.69
PDLIM1-202ENST00000477757 FCGBPQ9Y6R7 5405 aaPredicted RBP10.75□□□□□ -0.69
PDLIM1-202ENST00000477757 HBDP02042 147 aa10.75□□□□□ -0.69
PDLIM1-202ENST00000477757 TRBV10-2A0A0K0K1G8 114 aa10.74□□□□□ -0.69
PDLIM1-202ENST00000477757 HERV-K104P63124 156 aa10.74□□□□□ -0.69
PDLIM1-202ENST00000477757 RPL37P61927 97 aaKnown RBP10.73□□□□□ -0.69
PDLIM1-202ENST00000477757 JOSD1Q15040 202 aaPredicted RBP10.73□□□□□ -0.69
PDLIM1-202ENST00000477757 HRCT1Q6UXD1 115 aa10.72□□□□□ -0.69
PDLIM1-202ENST00000477757 ST20-AS1Q8NBB2 130 aa10.72□□□□□ -0.69
PDLIM1-202ENST00000477757 URB1-AS1Q96HZ7 61 aa10.72□□□□□ -0.69
PDLIM1-202ENST00000477757 LINC00587B1AMM8 73 aa10.71□□□□□ -0.69
PDLIM1-202ENST00000477757 CHTOPQ9Y3Y2 248 aaKnown RBP10.71□□□□□ -0.69
PDLIM1-202ENST00000477757 LOC107984156A0A0G2JMH3 177 aa10.7□□□□□ -0.7
PDLIM1-202ENST00000477757 PMCHL1Q16048 86 aa10.7□□□□□ -0.7
PDLIM1-202ENST00000477757 ARL17AQ8IVW1 177 aa10.7□□□□□ -0.7
PDLIM1-202ENST00000477757 C5orf52A6NGY3 159 aa10.69□□□□□ -0.7
PDLIM1-202ENST00000477757 MAP1LC3CQ9BXW4 147 aa10.69□□□□□ -0.7
PDLIM1-202ENST00000477757 SPANXB1Q9NS25 103 aaPredicted RBP10.69□□□□□ -0.7
PDLIM1-202ENST00000477757 FABP9Q0Z7S8 132 aa10.68□□□□□ -0.7
PDLIM1-202ENST00000477757 LINC00614P0C842 121 aa10.67□□□□□ -0.7
PDLIM1-202ENST00000477757 CFC1P0CG37 223 aa10.67□□□□□ -0.7
PDLIM1-202ENST00000477757 COX19Q49B96 90 aa10.67□□□□□ -0.7
PDLIM1-202ENST00000477757 TRAV23DV6A0A075B6W5 121 aa10.66□□□□□ -0.7
PDLIM1-202ENST00000477757 SPRR1BP22528 89 aa10.66□□□□□ -0.7
PDLIM1-202ENST00000477757 S100PP25815 95 aa10.65□□□□□ -0.7
PDLIM1-202ENST00000477757 MYMXA0A1B0GTQ4 84 aa10.64□□□□□ -0.71
PDLIM1-202ENST00000477757 S100A7L2Q5SY68 101 aa10.64□□□□□ -0.71
PDLIM1-202ENST00000477757 SLC25A34Q6PIV7 304 aa10.64□□□□□ -0.71
PDLIM1-202ENST00000477757 C18orf32Q8TCD1 76 aa10.64□□□□□ -0.71
PDLIM1-202ENST00000477757 ZNF73O43830 326 aaPredicted RBP10.63□□□□□ -0.71
PDLIM1-202ENST00000477757 CD164Q04900 197 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 132.9 ms