RNA–Protein interactions for RNA: ENST00000477182.5

LSM2-212, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-212ENST00000477182 C14orf144Q96I85 54 aa7.36□□□□□ -1.23
LSM2-212ENST00000477182 TP73-AS1Q9UF72 201 aa7.36□□□□□ -1.23
LSM2-212ENST00000477182 A0A0U1RRA0 63 aa7.35□□□□□ -1.23
LSM2-212ENST00000477182 LOC107984640A0A0U1RRK4 108 aa7.35□□□□□ -1.23
LSM2-212ENST00000477182 SMIM13P0DJ93 91 aa7.35□□□□□ -1.23
LSM2-212ENST00000477182 LINC00158P58513 81 aa7.35□□□□□ -1.23
LSM2-212ENST00000477182 RPL18AQ02543 176 aaKnown RBP7.35□□□□□ -1.23
LSM2-212ENST00000477182 NDUFC2-KCTD14E9PQ53 114 aa7.34□□□□□ -1.23
LSM2-212ENST00000477182 TLX1NBP0CAT3 122 aa7.34□□□□□ -1.23
LSM2-212ENST00000477182 RPL37AP61513 92 aaKnown RBP7.34□□□□□ -1.23
LSM2-212ENST00000477182 GAGE2BQ13066 116 aa7.34□□□□□ -1.23
LSM2-212ENST00000477182 SCGB1D4Q6XE38 83 aa7.34□□□□□ -1.23
LSM2-212ENST00000477182 SDIM1Q6ZPB5 146 aa7.34□□□□□ -1.23
LSM2-212ENST00000477182 BOD1L2Q8IYS8 172 aa7.34□□□□□ -1.23
LSM2-212ENST00000477182 C12orf57Q99622 126 aa7.34□□□□□ -1.23
LSM2-212ENST00000477182 A0A096LNI7 61 aa7.33□□□□□ -1.24
LSM2-212ENST00000477182 IGKV2-24A0A0C4DH68 120 aa7.33□□□□□ -1.24
LSM2-212ENST00000477182 KRTAP9-6A0A140TA67 174 aa7.33□□□□□ -1.24
LSM2-212ENST00000477182 COX17Q14061 63 aa7.33□□□□□ -1.24
LSM2-212ENST00000477182 GAGE2EQ4V326 116 aa7.33□□□□□ -1.24
LSM2-212ENST00000477182 Q6ZRP5 223 aa7.33□□□□□ -1.24
LSM2-212ENST00000477182 CIRBP-AS1Q8TBR5 109 aa7.33□□□□□ -1.24
LSM2-212ENST00000477182 GAGE2DQ9UEU5 116 aa7.33□□□□□ -1.24
LSM2-212ENST00000477182 PKIGQ9Y2B9 76 aa7.33□□□□□ -1.24
LSM2-212ENST00000477182 TNXBP22105 4242 aa7.33□□□□□ -1.24
LSM2-212ENST00000477182 LINC00587B1AMM8 73 aa7.32□□□□□ -1.24
LSM2-212ENST00000477182 DLEU1O43261 78 aa7.32□□□□□ -1.24
LSM2-212ENST00000477182 CHTF8P0CG12 524 aa7.32□□□□□ -1.24
LSM2-212ENST00000477182 CIRBPQ14011 172 aaKnown RBP7.32□□□□□ -1.24
LSM2-212ENST00000477182 SLC25A34Q6PIV7 304 aa7.32□□□□□ -1.24
LSM2-212ENST00000477182 MIR7-3HGQ8N6C7 128 aa7.32□□□□□ -1.24
LSM2-212ENST00000477182 DAND5Q8N907 189 aa7.32□□□□□ -1.24
LSM2-212ENST00000477182 TIMM17BO60830 172 aa7.31□□□□□ -1.24
LSM2-212ENST00000477182 PTTG1IPP53801 180 aa7.31□□□□□ -1.24
LSM2-212ENST00000477182 ADAMTSL4-AS1Q5T5F5 129 aa7.31□□□□□ -1.24
LSM2-212ENST00000477182 LINC00518Q8N0U6 118 aa7.31□□□□□ -1.24
LSM2-212ENST00000477182 LITAFQ99732 161 aa7.31□□□□□ -1.24
LSM2-212ENST00000477182 PRO1933Q9H354 126 aa7.31□□□□□ -1.24
LSM2-212ENST00000477182 SND1-IT1Q9HBX3 110 aa7.31□□□□□ -1.24
LSM2-212ENST00000477182 XAGE1AQ9HD64 81 aa7.31□□□□□ -1.24
LSM2-212ENST00000477182 PANO1I0J062 215 aa7.3□□□□□ -1.24
LSM2-212ENST00000477182 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.3□□□□□ -1.24
LSM2-212ENST00000477182 TMEM238C9JI98 176 aa7.29□□□□□ -1.24
LSM2-212ENST00000477182 HNRNPA3P51991 378 aaKnown RBP7.29□□□□□ -1.24
LSM2-212ENST00000477182 C9orf129Q5T035 196 aaKnown RBP7.29□□□□□ -1.24
LSM2-212ENST00000477182 NPC2P61916 151 aa7.28□□□□□ -1.24
LSM2-212ENST00000477182 C2orf91Q6ZV80 131 aa7.28□□□□□ -1.24
LSM2-212ENST00000477182 SPACA4Q8TDM5 124 aa7.28□□□□□ -1.24
LSM2-212ENST00000477182 UQCR10Q9UDW1 63 aa7.28□□□□□ -1.24
LSM2-212ENST00000477182 DPH3Q96FX2 82 aa7.27□□□□□ -1.25
LSM2-212ENST00000477182 SPANXDQ9BXN6 97 aa7.27□□□□□ -1.25
LSM2-212ENST00000477182 SPANXCQ9NY87 97 aa7.27□□□□□ -1.25
LSM2-212ENST00000477182 LINC00474Q9P2X8 69 aa7.27□□□□□ -1.25
LSM2-212ENST00000477182 FAM168BA1KXE4 195 aa7.26□□□□□ -1.25
LSM2-212ENST00000477182 EIF4EBP3O60516 100 aaPredicted RBP7.26□□□□□ -1.25
LSM2-212ENST00000477182 SOSTDC1Q6X4U4 206 aa7.26□□□□□ -1.25
LSM2-212ENST00000477182 LINC00308Q8TCZ7 52 aa7.26□□□□□ -1.25
LSM2-212ENST00000477182 SPANXB1Q9NS25 103 aaPredicted RBP7.26□□□□□ -1.25
LSM2-212ENST00000477182 HIGD1BQ9P298 99 aa7.26□□□□□ -1.25
LSM2-212ENST00000477182 A0A1W2PNN7 141 aa7.25□□□□□ -1.25
LSM2-212ENST00000477182 SRSF9Q13242 221 aaKnown RBP eCLIP7.25□□□□□ -1.25
LSM2-212ENST00000477182 FAM19A5Q7Z5A7 132 aaPredicted RBP7.25□□□□□ -1.25
LSM2-212ENST00000477182 MIEN1Q9BRT3 115 aa7.25□□□□□ -1.25
LSM2-212ENST00000477182 A0A087WYN8 130 aa7.24□□□□□ -1.25
LSM2-212ENST00000477182 Q6ZVH6 145 aa7.24□□□□□ -1.25
LSM2-212ENST00000477182 Q8NDZ9 215 aa7.24□□□□□ -1.25
LSM2-212ENST00000477182 HIST1H4GQ99525 98 aa7.24□□□□□ -1.25
LSM2-212ENST00000477182 LOC107984156A0A0G2JMH3 177 aa7.23□□□□□ -1.25
LSM2-212ENST00000477182 TSTD3H0UI37 97 aa7.23□□□□□ -1.25
LSM2-212ENST00000477182 KRTAP7-1Q8IUC3 87 aa7.23□□□□□ -1.25
LSM2-212ENST00000477182 MUSTN1Q8IVN3 82 aa7.23□□□□□ -1.25
LSM2-212ENST00000477182 ARL17AQ8IVW1 177 aa7.23□□□□□ -1.25
LSM2-212ENST00000477182 VPREB1P12018 145 aa7.22□□□□□ -1.25
LSM2-212ENST00000477182 IFITM1P13164 125 aa7.22□□□□□ -1.25
LSM2-212ENST00000477182 PLAC8Q9NZF1 115 aa7.22□□□□□ -1.25
LSM2-212ENST00000477182 PRR3P79522 188 aaKnown RBP7.21□□□□□ -1.26
LSM2-212ENST00000477182 RPL24P83731 157 aaKnown RBP7.21□□□□□ -1.26
LSM2-212ENST00000477182 COPS9Q8WXC6 57 aa7.21□□□□□ -1.26
LSM2-212ENST00000477182 IGLV5-37A0A075B6J1 123 aa7.2□□□□□ -1.26
LSM2-212ENST00000477182 M0QXV9 152 aa7.2□□□□□ -1.26
LSM2-212ENST00000477182 NCR3O14931 201 aa7.2□□□□□ -1.26
LSM2-212ENST00000477182 NKAPP1Q8N9T2 125 aa7.2□□□□□ -1.26
LSM2-212ENST00000477182 C22orf24Q9Y442 160 aa7.2□□□□□ -1.26
LSM2-212ENST00000477182 NDUFC2O95298 119 aa7.19□□□□□ -1.26
LSM2-212ENST00000477182 HSD52Q0P140 79 aa7.19□□□□□ -1.26
LSM2-212ENST00000477182 TAL2Q16559 108 aa7.19□□□□□ -1.26
LSM2-212ENST00000477182 PHF5AQ7RTV0 110 aaKnown RBP7.19□□□□□ -1.26
LSM2-212ENST00000477182 PPDPFQ9H3Y8 114 aa7.19□□□□□ -1.26
LSM2-212ENST00000477182 FAT4Q6V0I7 4981 aa7.18□□□□□ -1.26
LSM2-212ENST00000477182 A0A0U1RQV1 116 aa7.18□□□□□ -1.26
LSM2-212ENST00000477182 A4D1N5 150 aa7.18□□□□□ -1.26
LSM2-212ENST00000477182 GAGE10A6NGK3 116 aa7.18□□□□□ -1.26
LSM2-212ENST00000477182 CEND1Q8N111 149 aa7.18□□□□□ -1.26
LSM2-212ENST00000477182 M0R378 163 aa7.17□□□□□ -1.26
LSM2-212ENST00000477182 CTAG1AP78358 180 aa7.17□□□□□ -1.26
LSM2-212ENST00000477182 C4orf48Q5BLP8 95 aa7.17□□□□□ -1.26
LSM2-212ENST00000477182 MRPL55Q7Z7F7 128 aaKnown RBP7.17□□□□□ -1.26
LSM2-212ENST00000477182 C7orf33Q8WU49 177 aa7.17□□□□□ -1.26
LSM2-212ENST00000477182 IGKV2-28A0A075B6P5 120 aa7.16□□□□□ -1.26
LSM2-212ENST00000477182 IGKV2D-28P01615 120 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms