RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 PSCAO43653 123 aa9.41□□□□□ -0.9
COL4A6-206ENST00000477085 PRR3P79522 188 aaKnown RBP9.41□□□□□ -0.9
COL4A6-206ENST00000477085 LINC00476Q8WZB0 136 aa9.4□□□□□ -0.9
COL4A6-206ENST00000477085 Q6ZRP5 223 aa9.4□□□□□ -0.91
COL4A6-206ENST00000477085 CARD19Q96LW7 228 aa9.4□□□□□ -0.91
COL4A6-206ENST00000477085 DNAH6Q9C0G6 4158 aa9.4□□□□□ -0.91
COL4A6-206ENST00000477085 H7C2G1 150 aa9.39□□□□□ -0.91
COL4A6-206ENST00000477085 LINC00337Q8N6G1 96 aa9.39□□□□□ -0.91
COL4A6-206ENST00000477085 XAGE1AQ9HD64 81 aa9.39□□□□□ -0.91
COL4A6-206ENST00000477085 NDUFC2-KCTD14E9PQ53 114 aa9.38□□□□□ -0.91
COL4A6-206ENST00000477085 RPL13AP40429 203 aaKnown RBP9.37□□□□□ -0.91
COL4A6-206ENST00000477085 RNF151Q2KHN1 245 aa9.37□□□□□ -0.91
COL4A6-206ENST00000477085 HYDINQ4G0P3 5121 aa9.36□□□□□ -0.91
COL4A6-206ENST00000477085 GAGE2EQ4V326 116 aa9.35□□□□□ -0.91
COL4A6-206ENST00000477085 GAGE2DQ9UEU5 116 aa9.35□□□□□ -0.91
COL4A6-206ENST00000477085 NDUFC2O95298 119 aa9.35□□□□□ -0.91
COL4A6-206ENST00000477085 TLX1NBP0CAT3 122 aa9.35□□□□□ -0.91
COL4A6-206ENST00000477085 C9orf129Q5T035 196 aaKnown RBP9.35□□□□□ -0.91
COL4A6-206ENST00000477085 CNBPP62633 177 aaKnown RBP9.34□□□□□ -0.91
COL4A6-206ENST00000477085 LYRM7Q5U5X0 104 aa9.34□□□□□ -0.91
COL4A6-206ENST00000477085 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.33□□□□□ -0.92
COL4A6-206ENST00000477085 DNAH17Q9UFH2 4485 aa9.33□□□□□ -0.92
COL4A6-206ENST00000477085 TRAV13-2A0A0B4J235 113 aa9.32□□□□□ -0.92
COL4A6-206ENST00000477085 H3BMG7 143 aa9.32□□□□□ -0.92
COL4A6-206ENST00000477085 TRIAP1O43715 76 aa9.32□□□□□ -0.92
COL4A6-206ENST00000477085 NCR3O14931 201 aa9.32□□□□□ -0.92
COL4A6-206ENST00000477085 Q1RN00 199 aa9.32□□□□□ -0.92
COL4A6-206ENST00000477085 RPL18AQ02543 176 aaKnown RBP9.31□□□□□ -0.92
COL4A6-206ENST00000477085 OCIAD2Q56VL3 154 aa9.31□□□□□ -0.92
COL4A6-206ENST00000477085 PRO0461Q9UI25 63 aa9.31□□□□□ -0.92
COL4A6-206ENST00000477085 A0A087WTM6 91 aa9.3□□□□□ -0.92
COL4A6-206ENST00000477085 VPREB1P12018 145 aa9.3□□□□□ -0.92
COL4A6-206ENST00000477085 C14orf177Q52M58 125 aa9.3□□□□□ -0.92
COL4A6-206ENST00000477085 C1orf134Q5TEV5 83 aa9.3□□□□□ -0.92
COL4A6-206ENST00000477085 Q8N814 137 aa9.3□□□□□ -0.92
COL4A6-206ENST00000477085 FRAS1Q86XX4 4008 aa9.3□□□□□ -0.92
COL4A6-206ENST00000477085 HECTD4Q9Y4D8 3996 aa9.3□□□□□ -0.92
COL4A6-206ENST00000477085 F8W1H4 67 aa9.29□□□□□ -0.92
COL4A6-206ENST00000477085 PSMB2P49721 201 aa9.29□□□□□ -0.92
COL4A6-206ENST00000477085 SMIM11BQ8TCY0 68 aa9.29□□□□□ -0.92
COL4A6-206ENST00000477085 TCL1BO95988 128 aa9.28□□□□□ -0.92
COL4A6-206ENST00000477085 GAGE2BQ13066 116 aa9.28□□□□□ -0.92
COL4A6-206ENST00000477085 SERTAD4-AS1Q5TG53 156 aa9.28□□□□□ -0.92
COL4A6-206ENST00000477085 KRTAP7-1Q8IUC3 87 aa9.28□□□□□ -0.92
COL4A6-206ENST00000477085 OR13C6PQ8NH95 151 aa9.28□□□□□ -0.92
COL4A6-206ENST00000477085 SACSQ9NZJ4 4579 aa9.27□□□□□ -0.92
COL4A6-206ENST00000477085 TRBV20-1A0A075B6N2 111 aa9.27□□□□□ -0.92
COL4A6-206ENST00000477085 LOC107984640A0A0U1RRK4 108 aa9.27□□□□□ -0.92
COL4A6-206ENST00000477085 FAM168BA1KXE4 195 aa9.27□□□□□ -0.92
COL4A6-206ENST00000477085 FUSP35637 526 aaKnown RBP eCLIP9.27□□□□□ -0.92
COL4A6-206ENST00000477085 LINC01620Q4KN68 170 aa9.27□□□□□ -0.92
COL4A6-206ENST00000477085 SCGB1C2P0DMR2 95 aa9.27□□□□□ -0.93
COL4A6-206ENST00000477085 RPL28P46779 137 aaKnown RBP9.27□□□□□ -0.93
COL4A6-206ENST00000477085 C9orf163Q8N9P6 203 aa9.26□□□□□ -0.93
COL4A6-206ENST00000477085 A0A096LNI7 61 aa9.25□□□□□ -0.93
COL4A6-206ENST00000477085 TRBV10-2A0A0K0K1G8 114 aa9.25□□□□□ -0.93
COL4A6-206ENST00000477085 IGLV6-57P01721 117 aa9.25□□□□□ -0.93
COL4A6-206ENST00000477085 MTURNQ8N3F0 131 aa9.25□□□□□ -0.93
COL4A6-206ENST00000477085 K7ERU9 68 aa9.24□□□□□ -0.93
COL4A6-206ENST00000477085 RTL8CO15255 209 aa9.24□□□□□ -0.93
COL4A6-206ENST00000477085 CLEC2BQ92478 149 aa9.24□□□□□ -0.93
COL4A6-206ENST00000477085 TMEM126AQ9H061 195 aa9.24□□□□□ -0.93
COL4A6-206ENST00000477085 PLA2G2DQ9UNK4 145 aa9.24□□□□□ -0.93
COL4A6-206ENST00000477085 DNAH11Q96DT5 4516 aa9.24□□□□□ -0.93
COL4A6-206ENST00000477085 FAT2Q9NYQ8 4349 aa9.23□□□□□ -0.93
COL4A6-206ENST00000477085 TRBV10-3A0A0K0K1G6 114 aa9.23□□□□□ -0.93
COL4A6-206ENST00000477085 SMCPP49901 116 aaPredicted RBP9.23□□□□□ -0.93
COL4A6-206ENST00000477085 TNP2Q05952 138 aa9.23□□□□□ -0.93
COL4A6-206ENST00000477085 SDIM1Q6ZPB5 146 aa9.23□□□□□ -0.93
COL4A6-206ENST00000477085 C16orf90A8MZG2 172 aa9.22□□□□□ -0.93
COL4A6-206ENST00000477085 S100A7L2Q5SY68 101 aa9.22□□□□□ -0.93
COL4A6-206ENST00000477085 M0R378 163 aa9.22□□□□□ -0.93
COL4A6-206ENST00000477085 FAM218AQ96MZ4 157 aa9.22□□□□□ -0.93
COL4A6-206ENST00000477085 IGKV2-24A0A0C4DH68 120 aa9.21□□□□□ -0.94
COL4A6-206ENST00000477085 CHTF8P0CG12 524 aa9.21□□□□□ -0.94
COL4A6-206ENST00000477085 A0A1W2PNN7 141 aa9.2□□□□□ -0.94
COL4A6-206ENST00000477085 PANO1I0J062 215 aa9.2□□□□□ -0.94
COL4A6-206ENST00000477085 COX6CP09669 75 aa9.2□□□□□ -0.94
COL4A6-206ENST00000477085 ETDBQ3ZM63 59 aa9.2□□□□□ -0.94
COL4A6-206ENST00000477085 IGLV5-37A0A075B6J1 123 aa9.19□□□□□ -0.94
COL4A6-206ENST00000477085 ATXN8Q156A1 80 aa9.19□□□□□ -0.94
COL4A6-206ENST00000477085 C7orf33Q8WU49 177 aa9.19□□□□□ -0.94
COL4A6-206ENST00000477085 FAM19A5Q7Z5A7 132 aaPredicted RBP9.19□□□□□ -0.94
COL4A6-206ENST00000477085 C22orf24Q9Y442 160 aa9.19□□□□□ -0.94
COL4A6-206ENST00000477085 PKD1P98161 4303 aa9.18□□□□□ -0.94
COL4A6-206ENST00000477085 LST1O00453 97 aa9.18□□□□□ -0.94
COL4A6-206ENST00000477085 LCE6AA0A183 80 aa9.17□□□□□ -0.94
COL4A6-206ENST00000477085 C6orf99Q4VX62 202 aa9.17□□□□□ -0.94
COL4A6-206ENST00000477085 NKAPP1Q8N9T2 125 aa9.17□□□□□ -0.94
COL4A6-206ENST00000477085 TRAV23DV6A0A075B6W5 121 aa9.16□□□□□ -0.94
COL4A6-206ENST00000477085 A0A087WYN8 130 aa9.16□□□□□ -0.94
COL4A6-206ENST00000477085 M0QXV9 152 aa9.16□□□□□ -0.94
COL4A6-206ENST00000477085 C9JAW5 83 aa9.15□□□□□ -0.94
COL4A6-206ENST00000477085 SLC25A20O43772 301 aa9.15□□□□□ -0.94
COL4A6-206ENST00000477085 LINC00167Q96N53 147 aa9.15□□□□□ -0.94
COL4A6-206ENST00000477085 DNAH5Q8TE73 4624 aa9.14□□□□□ -0.95
COL4A6-206ENST00000477085 RPL37AP8A6NKH3 93 aa9.14□□□□□ -0.95
COL4A6-206ENST00000477085 KRTAP10-2P60368 255 aa9.14□□□□□ -0.95
COL4A6-206ENST00000477085 LINC01600Q96MT4 127 aa9.14□□□□□ -0.95
COL4A6-206ENST00000477085 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 125 ms