RNA–Protein interactions for RNA: ENST00000475997.6

HNRNPU-208, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 5,290 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-208ENST00000475997 PROK1P58294 105 aa4.41□□□□□ -1.7
HNRNPU-208ENST00000475997 LINC00242Q5T6M2 205 aa4.41□□□□□ -1.7
HNRNPU-208ENST00000475997 RETNLBQ9BQ08 111 aa4.41□□□□□ -1.7
HNRNPU-208ENST00000475997 SMIM1B2RUZ4 78 aa4.4□□□□□ -1.7
HNRNPU-208ENST00000475997 IGLV1-40P01703 118 aa4.4□□□□□ -1.7
HNRNPU-208ENST00000475997 DEFB114Q30KQ6 69 aa4.4□□□□□ -1.7
HNRNPU-208ENST00000475997 C1orf64Q8NEQ6 169 aa4.4□□□□□ -1.7
HNRNPU-208ENST00000475997 CHCHD7Q9BUK0 85 aa4.4□□□□□ -1.7
HNRNPU-208ENST00000475997 DCHS1Q96JQ0 3298 aa4.4□□□□□ -1.71
HNRNPU-208ENST00000475997 A0A087WYN8 130 aa4.4□□□□□ -1.71
HNRNPU-208ENST00000475997 DEFB131BA0A096LNP1 70 aa4.39□□□□□ -1.71
HNRNPU-208ENST00000475997 ZNF843Q8N446 348 aa4.39□□□□□ -1.71
HNRNPU-208ENST00000475997 TP53AIP1Q9HCN2 124 aa4.39□□□□□ -1.71
HNRNPU-208ENST00000475997 LOC100131303A0A0U1RQF7 123 aa4.39□□□□□ -1.71
HNRNPU-208ENST00000475997 CYSRT1A8MQ03 144 aa4.39□□□□□ -1.71
HNRNPU-208ENST00000475997 DEFB113Q30KQ7 82 aa4.39□□□□□ -1.71
HNRNPU-208ENST00000475997 CYP4F30PQ9H0H9 118 aa4.39□□□□□ -1.71
HNRNPU-208ENST00000475997 F8WDY8 70 aa4.39□□□□□ -1.71
HNRNPU-208ENST00000475997 ZNF702PQ9H963 129 aa4.38□□□□□ -1.71
HNRNPU-208ENST00000475997 LINC01546A6NGU7 62 aa4.38□□□□□ -1.71
HNRNPU-208ENST00000475997 ACYP2P14621 99 aa4.38□□□□□ -1.71
HNRNPU-208ENST00000475997 ATP11AUNQ6ZP68 121 aa4.38□□□□□ -1.71
HNRNPU-208ENST00000475997 IGHV6-1A0A0B4J1U7 121 aa4.37□□□□□ -1.71
HNRNPU-208ENST00000475997 IGLV9-49A0A0B4J1Y8 123 aa4.37□□□□□ -1.71
HNRNPU-208ENST00000475997 TSPEAR-AS2P59090 65 aa4.37□□□□□ -1.71
HNRNPU-208ENST00000475997 MUC4Q99102 2169 aa4.37□□□□□ -1.71
HNRNPU-208ENST00000475997 OXLD1Q5BKU9 147 aa4.37□□□□□ -1.71
HNRNPU-208ENST00000475997 AMELXQ99217 191 aa4.37□□□□□ -1.71
HNRNPU-208ENST00000475997 A0A087WSZ3 146 aa4.37□□□□□ -1.71
HNRNPU-208ENST00000475997 SPINT4Q6UDR6 99 aa4.37□□□□□ -1.71
HNRNPU-208ENST00000475997 KIF25-AS1Q9Y6Z4 181 aa4.37□□□□□ -1.71
HNRNPU-208ENST00000475997 LAMA5O15230 3695 aa4.37□□□□□ -1.71
HNRNPU-208ENST00000475997 PLA2G2AP14555 144 aa4.37□□□□□ -1.71
HNRNPU-208ENST00000475997 C18orf65Q6ZTR6 163 aa4.37□□□□□ -1.71
HNRNPU-208ENST00000475997 ZFHX4Q86UP3 3567 aa4.37□□□□□ -1.71
HNRNPU-208ENST00000475997 RPL37AP8A6NKH3 93 aa4.37□□□□□ -1.71
HNRNPU-208ENST00000475997 LINC00315P59091 139 aa4.36□□□□□ -1.71
HNRNPU-208ENST00000475997 LINC01561Q8N1V8 128 aa4.36□□□□□ -1.71
HNRNPU-208ENST00000475997 BBC3Q96PG8 261 aaPredicted RBP4.36□□□□□ -1.71
HNRNPU-208ENST00000475997 SPINK1P00995 79 aa4.36□□□□□ -1.71
HNRNPU-208ENST00000475997 Q6ZTC4 211 aa4.36□□□□□ -1.71
HNRNPU-208ENST00000475997 ZNF575Q86XF7 245 aa4.36□□□□□ -1.71
HNRNPU-208ENST00000475997 TRAV10A0A0B4J240 114 aa4.36□□□□□ -1.71
HNRNPU-208ENST00000475997 ADAMTSL4-AS1Q5T5F5 129 aa4.36□□□□□ -1.71
HNRNPU-208ENST00000475997 ZNF580Q9UK33 172 aa4.36□□□□□ -1.71
HNRNPU-208ENST00000475997 UNQ6190/PRO20217Q6UXQ8 127 aa4.35□□□□□ -1.71
HNRNPU-208ENST00000475997 Q6YL49 198 aa4.35□□□□□ -1.71
HNRNPU-208ENST00000475997 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.35□□□□□ -1.71
HNRNPU-208ENST00000475997 REG3GQ6UW15 175 aa4.35□□□□□ -1.71
HNRNPU-208ENST00000475997 X6R8D5 127 aa4.35□□□□□ -1.71
HNRNPU-208ENST00000475997 COL12A1Q99715 3063 aa4.35□□□□□ -1.71
HNRNPU-208ENST00000475997 J3QKU1 62 aa4.35□□□□□ -1.71
HNRNPU-208ENST00000475997 KPRPQ5T749 579 aaPredicted RBP4.35□□□□□ -1.71
HNRNPU-208ENST00000475997 BRI3O95415 125 aa4.34□□□□□ -1.71
HNRNPU-208ENST00000475997 Q6ZSV7 163 aa4.34□□□□□ -1.71
HNRNPU-208ENST00000475997 Q9BRP9 147 aa4.34□□□□□ -1.71
HNRNPU-208ENST00000475997 FLNCQ14315 2725 aa4.34□□□□□ -1.71
HNRNPU-208ENST00000475997 ERC2-IT1O76042 136 aa4.34□□□□□ -1.72
HNRNPU-208ENST00000475997 KLK9Q2XQG4 91 aa4.34□□□□□ -1.72
HNRNPU-208ENST00000475997 SMIM29Q86T20 159 aa4.34□□□□□ -1.72
HNRNPU-208ENST00000475997 SBSPONQ8IVN8 264 aa4.34□□□□□ -1.72
HNRNPU-208ENST00000475997 FAM19A4Q96LR4 140 aa4.34□□□□□ -1.72
HNRNPU-208ENST00000475997 ASH1LQ9NR48 2969 aaKnown RBP4.34□□□□□ -1.72
HNRNPU-208ENST00000475997 PRO0461Q9UI25 63 aa4.33□□□□□ -1.72
HNRNPU-208ENST00000475997 FASNP49327 2511 aaKnown RBP4.33□□□□□ -1.72
HNRNPU-208ENST00000475997 LCA10Q71F78 164 aa4.32□□□□□ -1.72
HNRNPU-208ENST00000475997 C2orf48Q96LS8 159 aa4.32□□□□□ -1.72
HNRNPU-208ENST00000475997 SMCPP49901 116 aaPredicted RBP4.32□□□□□ -1.72
HNRNPU-208ENST00000475997 Q8N2B8 174 aa4.32□□□□□ -1.72
HNRNPU-208ENST00000475997 Q9UF83 564 aa4.32□□□□□ -1.72
HNRNPU-208ENST00000475997 Q6ZSN1 163 aa4.32□□□□□ -1.72
HNRNPU-208ENST00000475997 LINC00482Q8N8I6 264 aa4.31□□□□□ -1.72
HNRNPU-208ENST00000475997 C6orf48Q9UBA6 75 aa4.31□□□□□ -1.72
HNRNPU-208ENST00000475997 C7orf65Q6ZTY9 151 aa4.31□□□□□ -1.72
HNRNPU-208ENST00000475997 LINC00337Q8N6G1 96 aa4.31□□□□□ -1.72
HNRNPU-208ENST00000475997 SPATA3Q8NHX4 192 aa4.31□□□□□ -1.72
HNRNPU-208ENST00000475997 KTN1-AS1Q86SY8 53 aa4.31□□□□□ -1.72
HNRNPU-208ENST00000475997 KRTAP10-9P60411 292 aa4.31□□□□□ -1.72
HNRNPU-208ENST00000475997 TRAV22A0A0B4J277 110 aa4.3□□□□□ -1.72
HNRNPU-208ENST00000475997 A0A1B0GUV1 79 aa4.3□□□□□ -1.72
HNRNPU-208ENST00000475997 F8P00451 2351 aa4.3□□□□□ -1.72
HNRNPU-208ENST00000475997 PRR3P79522 188 aaKnown RBP4.3□□□□□ -1.72
HNRNPU-208ENST00000475997 COX6A2Q02221 97 aa4.3□□□□□ -1.72
HNRNPU-208ENST00000475997 RELNP78509 3460 aa4.3□□□□□ -1.72
HNRNPU-208ENST00000475997 UQCR11O14957 56 aa4.3□□□□□ -1.72
HNRNPU-208ENST00000475997 CIRBP-AS1Q8TBR5 109 aa4.3□□□□□ -1.72
HNRNPU-208ENST00000475997 LOC110117498A0A087WWA1 95 aa4.3□□□□□ -1.72
HNRNPU-208ENST00000475997 C9orf116Q5BN46 136 aaPredicted RBP4.3□□□□□ -1.72
HNRNPU-208ENST00000475997 C11orf72Q8NBR9 251 aa4.3□□□□□ -1.72
HNRNPU-208ENST00000475997 FLNAP21333 2647 aaKnown RBP4.29□□□□□ -1.72
HNRNPU-208ENST00000475997 MDFIQ99750 246 aa4.29□□□□□ -1.72
HNRNPU-208ENST00000475997 ITPR1Q14643 2758 aa4.29□□□□□ -1.72
HNRNPU-208ENST00000475997 NHLRC4P0CG21 123 aaPredicted RBP4.29□□□□□ -1.72
HNRNPU-208ENST00000475997 ODF3L2Q3SX64 289 aa4.29□□□□□ -1.72
HNRNPU-208ENST00000475997 IGLV5-39A0A0G2JS06 123 aa4.29□□□□□ -1.72
HNRNPU-208ENST00000475997 PRLHP81277 87 aa4.29□□□□□ -1.72
HNRNPU-208ENST00000475997 C6orf223Q8N319 242 aa4.29□□□□□ -1.72
HNRNPU-208ENST00000475997 LOC101927531A0A1B0GV80 90 aa4.29□□□□□ -1.72
HNRNPU-208ENST00000475997 A8MUN3 132 aa4.29□□□□□ -1.72
HNRNPU-208ENST00000475997 ELOF1P60002 83 aaKnown RBP4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms