RNA–Protein interactions for RNA: ENST00000473894.1

RAB4A-202, Transcript of RAB4A, member RAS oncogene family, humanhuman

TSL 3

Gene RAB4A, Length 708 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4A-202ENST00000473894 VAMP8Q9BV40 100 aa11.13□□□□□ -0.63
RAB4A-202ENST00000473894 IGLV5-37A0A075B6J1 123 aa11.12□□□□□ -0.63
RAB4A-202ENST00000473894 A0A0U1RRA0 63 aa11.12□□□□□ -0.63
RAB4A-202ENST00000473894 DLEU1O43261 78 aa11.11□□□□□ -0.63
RAB4A-202ENST00000473894 COX8AP10176 69 aa11.11□□□□□ -0.63
RAB4A-202ENST00000473894 ADAMTSL4-AS1Q5T5F5 129 aa11.11□□□□□ -0.63
RAB4A-202ENST00000473894 SERTAD4-AS1Q5TG53 156 aa11.11□□□□□ -0.63
RAB4A-202ENST00000473894 BOD1L2Q8IYS8 172 aa11.11□□□□□ -0.63
RAB4A-202ENST00000473894 TP73-AS1Q9UF72 201 aa11.11□□□□□ -0.63
RAB4A-202ENST00000473894 PAM16Q9Y3D7 125 aa11.1□□□□□ -0.63
RAB4A-202ENST00000473894 LOC105371267A0A1B0GV96 52 aa11.09□□□□□ -0.63
RAB4A-202ENST00000473894 SPATA45Q537H7 98 aa11.09□□□□□ -0.63
RAB4A-202ENST00000473894 SCGB1D4Q6XE38 83 aa11.09□□□□□ -0.63
RAB4A-202ENST00000473894 FAT1Q14517 4588 aa11.09□□□□□ -0.63
RAB4A-202ENST00000473894 VPREB1P12018 145 aa11.08□□□□□ -0.64
RAB4A-202ENST00000473894 FAM19A5Q7Z5A7 132 aaPredicted RBP11.08□□□□□ -0.64
RAB4A-202ENST00000473894 DAND5Q8N907 189 aa11.08□□□□□ -0.64
RAB4A-202ENST00000473894 PPDPFQ9H3Y8 114 aa11.08□□□□□ -0.64
RAB4A-202ENST00000473894 HERC1Q15751 4861 aa11.08□□□□□ -0.64
RAB4A-202ENST00000473894 TMEM238C9JI98 176 aa11.07□□□□□ -0.64
RAB4A-202ENST00000473894 Q6ZVH6 145 aa11.07□□□□□ -0.64
RAB4A-202ENST00000473894 Q8N1X5 172 aa11.07□□□□□ -0.64
RAB4A-202ENST00000473894 Q8NDZ9 215 aa11.07□□□□□ -0.64
RAB4A-202ENST00000473894 SPANXDQ9BXN6 97 aa11.07□□□□□ -0.64
RAB4A-202ENST00000473894 SPANXCQ9NY87 97 aa11.07□□□□□ -0.64
RAB4A-202ENST00000473894 C22orf24Q9Y442 160 aa11.07□□□□□ -0.64
RAB4A-202ENST00000473894 M0QXV9 152 aa11.06□□□□□ -0.64
RAB4A-202ENST00000473894 SMR3BP02814 79 aaPredicted RBP11.06□□□□□ -0.64
RAB4A-202ENST00000473894 RPL24P83731 157 aaKnown RBP11.06□□□□□ -0.64
RAB4A-202ENST00000473894 SOSTDC1Q6X4U4 206 aa11.05□□□□□ -0.64
RAB4A-202ENST00000473894 LINC00528Q8N1L1 170 aa11.05□□□□□ -0.64
RAB4A-202ENST00000473894 C7orf33Q8WU49 177 aa11.05□□□□□ -0.64
RAB4A-202ENST00000473894 PHF5AQ7RTV0 110 aaKnown RBP11.04□□□□□ -0.64
RAB4A-202ENST00000473894 MRPL55Q7Z7F7 128 aaKnown RBP11.04□□□□□ -0.64
RAB4A-202ENST00000473894 SPANXB1Q9NS25 103 aaPredicted RBP11.04□□□□□ -0.64
RAB4A-202ENST00000473894 EIF4EBP3O60516 100 aaPredicted RBP11.03□□□□□ -0.64
RAB4A-202ENST00000473894 NDUFC2O95298 119 aa11.03□□□□□ -0.64
RAB4A-202ENST00000473894 SMIM6P0DI80 62 aa11.03□□□□□ -0.64
RAB4A-202ENST00000473894 LBHQ53QV2 105 aaPredicted RBP11.03□□□□□ -0.64
RAB4A-202ENST00000473894 LINC00308Q8TCZ7 52 aa11.03□□□□□ -0.64
RAB4A-202ENST00000473894 C14orf144Q96I85 54 aa11.03□□□□□ -0.64
RAB4A-202ENST00000473894 VPS13BQ7Z7G8 4022 aa11.03□□□□□ -0.64
RAB4A-202ENST00000473894 IFITM1P13164 125 aa11.02□□□□□ -0.65
RAB4A-202ENST00000473894 NKAPP1Q8N9T2 125 aa11.02□□□□□ -0.65
RAB4A-202ENST00000473894 MIEN1Q9BRT3 115 aa11.02□□□□□ -0.65
RAB4A-202ENST00000473894 KRTAP10-4P60372 401 aaPredicted RBP11.01□□□□□ -0.65
RAB4A-202ENST00000473894 SLC25A34Q6PIV7 304 aa11.01□□□□□ -0.65
RAB4A-202ENST00000473894 COPS9Q8WXC6 57 aa11.01□□□□□ -0.65
RAB4A-202ENST00000473894 TRBV10-2A0A0K0K1G8 114 aa11□□□□□ -0.65
RAB4A-202ENST00000473894 FAM229AH3BQW9 127 aa11□□□□□ -0.65
RAB4A-202ENST00000473894 S100A12P80511 92 aa11□□□□□ -0.65
RAB4A-202ENST00000473894 LINC00167Q96N53 147 aa11□□□□□ -0.65
RAB4A-202ENST00000473894 HIGD1BQ9P298 99 aa11□□□□□ -0.65
RAB4A-202ENST00000473894 M0R378 163 aa10.99□□□□□ -0.65
RAB4A-202ENST00000473894 Q5VSD8 79 aa10.99□□□□□ -0.65
RAB4A-202ENST00000473894 KRTAP11-1Q8IUC1 163 aa10.98□□□□□ -0.65
RAB4A-202ENST00000473894 PLA2G1BP04054 148 aaKnown RBP10.97□□□□□ -0.65
RAB4A-202ENST00000473894 RPL37AP61513 92 aaKnown RBP10.97□□□□□ -0.65
RAB4A-202ENST00000473894 PRR3P79522 188 aaKnown RBP10.97□□□□□ -0.65
RAB4A-202ENST00000473894 DMBT1Q9UGM3 2413 aaPredicted RBP10.97□□□□□ -0.65
RAB4A-202ENST00000473894 SRRM2Q9UQ35 2752 aaKnown RBP10.97□□□□□ -0.65
RAB4A-202ENST00000473894 IGLV1-50A0A075B6I6 118 aa10.96□□□□□ -0.65
RAB4A-202ENST00000473894 NPC2P61916 151 aa10.96□□□□□ -0.65
RAB4A-202ENST00000473894 C2orf91Q6ZV80 131 aa10.96□□□□□ -0.65
RAB4A-202ENST00000473894 PSORS1C2Q9UIG4 136 aa10.96□□□□□ -0.65
RAB4A-202ENST00000473894 UBE2BP63146 152 aa10.95□□□□□ -0.66
RAB4A-202ENST00000473894 SRSF9Q13242 221 aaKnown RBP eCLIP10.95□□□□□ -0.66
RAB4A-202ENST00000473894 MUSTN1Q8IVN3 82 aa10.95□□□□□ -0.66
RAB4A-202ENST00000473894 IGKV2-28A0A075B6P5 120 aa10.93□□□□□ -0.66
RAB4A-202ENST00000473894 GAGE10A6NGK3 116 aa10.93□□□□□ -0.66
RAB4A-202ENST00000473894 IGKV2D-28P01615 120 aa10.93□□□□□ -0.66
RAB4A-202ENST00000473894 RPL37AP8A6NKH3 93 aa10.92□□□□□ -0.66
RAB4A-202ENST00000473894 NCR3O14931 201 aa10.92□□□□□ -0.66
RAB4A-202ENST00000473894 LINC00518Q8N0U6 118 aa10.92□□□□□ -0.66
RAB4A-202ENST00000473894 UQCR10Q9UDW1 63 aa10.92□□□□□ -0.66
RAB4A-202ENST00000473894 IGLV6-57P01721 117 aa10.91□□□□□ -0.66
RAB4A-202ENST00000473894 TAL2Q16559 108 aa10.91□□□□□ -0.66
RAB4A-202ENST00000473894 KCNQ1DNQ9H478 68 aa10.91□□□□□ -0.66
RAB4A-202ENST00000473894 HIST1H4GQ99525 98 aa10.9□□□□□ -0.66
RAB4A-202ENST00000473894 TRBV10-3A0A0K0K1G6 114 aa10.89□□□□□ -0.67
RAB4A-202ENST00000473894 C1orf137Q5JT78 98 aa10.88□□□□□ -0.67
RAB4A-202ENST00000473894 PRYO14603 147 aa10.87□□□□□ -0.67
RAB4A-202ENST00000473894 DDTP30046 118 aa10.87□□□□□ -0.67
RAB4A-202ENST00000473894 SPRR1AP35321 89 aa10.87□□□□□ -0.67
RAB4A-202ENST00000473894 LINC00337Q8N6G1 96 aa10.87□□□□□ -0.67
RAB4A-202ENST00000473894 C12orf57Q99622 126 aa10.87□□□□□ -0.67
RAB4A-202ENST00000473894 BCE1O60756 84 aa10.86□□□□□ -0.67
RAB4A-202ENST00000473894 IGLV7-43P04211 117 aa10.86□□□□□ -0.67
RAB4A-202ENST00000473894 REG3GQ6UW15 175 aa10.86□□□□□ -0.67
RAB4A-202ENST00000473894 TMEM126AQ9H061 195 aa10.86□□□□□ -0.67
RAB4A-202ENST00000473894 A4D1N5 150 aa10.85□□□□□ -0.67
RAB4A-202ENST00000473894 S100A7L2Q5SY68 101 aa10.85□□□□□ -0.67
RAB4A-202ENST00000473894 KRTAP4-16G5E9R7 235 aaPredicted RBP10.84□□□□□ -0.67
RAB4A-202ENST00000473894 CBY1Q9Y3M2 126 aa10.84□□□□□ -0.67
RAB4A-202ENST00000473894 HNRNPA3P51991 378 aaKnown RBP10.83□□□□□ -0.68
RAB4A-202ENST00000473894 KRTAP13-1Q8IUC0 172 aa10.83□□□□□ -0.68
RAB4A-202ENST00000473894 CEND1Q8N111 149 aa10.83□□□□□ -0.68
RAB4A-202ENST00000473894 PKHD1L1Q86WI1 4243 aa10.83□□□□□ -0.68
RAB4A-202ENST00000473894 TRAV13-2A0A0B4J235 113 aa10.82□□□□□ -0.68
RAB4A-202ENST00000473894 INAFM2P0DMQ5 153 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms