RNA–Protein interactions for RNA: ENST00000472725.5

SF1-213, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 632 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-213ENST00000472725 RPL24P83731 157 aaKnown RBP12.47□□□□□ -0.41
SF1-213ENST00000472725 SERTAD4-AS1Q5TG53 156 aa12.47□□□□□ -0.41
SF1-213ENST00000472725 MIR7-3HGQ8N6C7 128 aa12.47□□□□□ -0.41
SF1-213ENST00000472725 A0A0U1RRA0 63 aa12.46□□□□□ -0.41
SF1-213ENST00000472725 TIMM17BO60830 172 aa12.46□□□□□ -0.41
SF1-213ENST00000472725 PHF5AQ7RTV0 110 aaKnown RBP12.46□□□□□ -0.41
SF1-213ENST00000472725 C22orf24Q9Y442 160 aa12.46□□□□□ -0.41
SF1-213ENST00000472725 HERC2O95714 4834 aa12.46□□□□□ -0.41
SF1-213ENST00000472725 LOC107984156A0A0G2JMH3 177 aa12.45□□□□□ -0.42
SF1-213ENST00000472725 ARL17AQ8IVW1 177 aa12.45□□□□□ -0.42
SF1-213ENST00000472725 NKAPP1Q8N9T2 125 aa12.44□□□□□ -0.42
SF1-213ENST00000472725 KRTAP10-4P60372 401 aaPredicted RBP12.43□□□□□ -0.42
SF1-213ENST00000472725 JOSD1Q15040 202 aaPredicted RBP12.43□□□□□ -0.42
SF1-213ENST00000472725 MRPL55Q7Z7F7 128 aaKnown RBP12.43□□□□□ -0.42
SF1-213ENST00000472725 VPREB1P12018 145 aa12.42□□□□□ -0.42
SF1-213ENST00000472725 KRTAP4-5Q9BYR2 181 aa12.42□□□□□ -0.42
SF1-213ENST00000472725 PRR3P79522 188 aaKnown RBP12.41□□□□□ -0.42
SF1-213ENST00000472725 UBE2BP63146 152 aa12.4□□□□□ -0.42
SF1-213ENST00000472725 MIEN1Q9BRT3 115 aa12.4□□□□□ -0.42
SF1-213ENST00000472725 TTTY13Q9BZ97 58 aa12.4□□□□□ -0.42
SF1-213ENST00000472725 SCGB1D4Q6XE38 83 aa12.39□□□□□ -0.43
SF1-213ENST00000472725 PCP2Q8IVA1 136 aa12.38□□□□□ -0.43
SF1-213ENST00000472725 BOD1L2Q8IYS8 172 aa12.38□□□□□ -0.43
SF1-213ENST00000472725 LITAFQ99732 161 aa12.38□□□□□ -0.43
SF1-213ENST00000472725 PSORS1C2Q9UIG4 136 aa12.38□□□□□ -0.43
SF1-213ENST00000472725 TMEM238C9JI98 176 aa12.37□□□□□ -0.43
SF1-213ENST00000472725 ADAMTSL4-AS1Q5T5F5 129 aa12.37□□□□□ -0.43
SF1-213ENST00000472725 DAND5Q8N907 189 aa12.37□□□□□ -0.43
SF1-213ENST00000472725 LINC00167Q96N53 147 aa12.37□□□□□ -0.43
SF1-213ENST00000472725 Q6ZVH6 145 aa12.36□□□□□ -0.43
SF1-213ENST00000472725 M0R378 163 aa12.35□□□□□ -0.43
SF1-213ENST00000472725 NDUFC2O95298 119 aa12.35□□□□□ -0.43
SF1-213ENST00000472725 INAFM2P0DMQ5 153 aa12.35□□□□□ -0.43
SF1-213ENST00000472725 COPS9Q8WXC6 57 aa12.35□□□□□ -0.43
SF1-213ENST00000472725 SPANXDQ9BXN6 97 aa12.34□□□□□ -0.43
SF1-213ENST00000472725 PPDPFQ9H3Y8 114 aa12.34□□□□□ -0.43
SF1-213ENST00000472725 SPANXCQ9NY87 97 aa12.34□□□□□ -0.43
SF1-213ENST00000472725 FAT1Q14517 4588 aa12.33□□□□□ -0.44
SF1-213ENST00000472725 TRBV10-2A0A0K0K1G8 114 aa12.33□□□□□ -0.44
SF1-213ENST00000472725 Q8NDZ9 215 aa12.33□□□□□ -0.44
SF1-213ENST00000472725 VAMP8Q9BV40 100 aa12.33□□□□□ -0.44
SF1-213ENST00000472725 C1orf137Q5JT78 98 aa12.32□□□□□ -0.44
SF1-213ENST00000472725 KRTAP11-1Q8IUC1 163 aa12.32□□□□□ -0.44
SF1-213ENST00000472725 IGLV1-50A0A075B6I6 118 aa12.31□□□□□ -0.44
SF1-213ENST00000472725 DLEU1O43261 78 aa12.31□□□□□ -0.44
SF1-213ENST00000472725 COX8AP10176 69 aa12.31□□□□□ -0.44
SF1-213ENST00000472725 IFITM1P13164 125 aa12.31□□□□□ -0.44
SF1-213ENST00000472725 LINC00308Q8TCZ7 52 aa12.31□□□□□ -0.44
SF1-213ENST00000472725 SPANXB1Q9NS25 103 aaPredicted RBP12.31□□□□□ -0.44
SF1-213ENST00000472725 GAGE10A6NGK3 116 aa12.3□□□□□ -0.44
SF1-213ENST00000472725 PYY3Q5JQD4 70 aa12.3□□□□□ -0.44
SF1-213ENST00000472725 SOSTDC1Q6X4U4 206 aa12.3□□□□□ -0.44
SF1-213ENST00000472725 VPS13BQ7Z7G8 4022 aa12.3□□□□□ -0.44
SF1-213ENST00000472725 RPL37AP8A6NKH3 93 aa12.29□□□□□ -0.44
SF1-213ENST00000472725 SPINK6Q6UWN8 80 aa12.29□□□□□ -0.44
SF1-213ENST00000472725 SRRM2Q9UQ35 2752 aaKnown RBP12.29□□□□□ -0.44
SF1-213ENST00000472725 IGLV7-43P04211 117 aa12.28□□□□□ -0.44
SF1-213ENST00000472725 SRSF9Q13242 221 aaKnown RBP eCLIP12.28□□□□□ -0.44
SF1-213ENST00000472725 SPATA45Q537H7 98 aa12.28□□□□□ -0.44
SF1-213ENST00000472725 PAM16Q9Y3D7 125 aa12.28□□□□□ -0.44
SF1-213ENST00000472725 BCE1O60756 84 aa12.26□□□□□ -0.45
SF1-213ENST00000472725 NPC2P61916 151 aa12.26□□□□□ -0.45
SF1-213ENST00000472725 S100A12P80511 92 aa12.26□□□□□ -0.45
SF1-213ENST00000472725 IGKV2-28A0A075B6P5 120 aa12.25□□□□□ -0.45
SF1-213ENST00000472725 NCR3O14931 201 aa12.25□□□□□ -0.45
SF1-213ENST00000472725 EIF4EBP3O60516 100 aaPredicted RBP12.25□□□□□ -0.45
SF1-213ENST00000472725 IGKV2D-28P01615 120 aa12.25□□□□□ -0.45
SF1-213ENST00000472725 HNRNPA3P51991 378 aaKnown RBP12.25□□□□□ -0.45
SF1-213ENST00000472725 LINC00518Q8N0U6 118 aa12.24□□□□□ -0.45
SF1-213ENST00000472725 PRYO14603 147 aa12.23□□□□□ -0.45
SF1-213ENST00000472725 REG3GQ6UW15 175 aa12.23□□□□□ -0.45
SF1-213ENST00000472725 KCNQ1DNQ9H478 68 aa12.23□□□□□ -0.45
SF1-213ENST00000472725 CBY1Q9Y3M2 126 aa12.23□□□□□ -0.45
SF1-213ENST00000472725 TMEM126AQ9H061 195 aa12.22□□□□□ -0.45
SF1-213ENST00000472725 ZNF861PO60384 105 aa12.21□□□□□ -0.45
SF1-213ENST00000472725 DDTP30046 118 aa12.21□□□□□ -0.45
SF1-213ENST00000472725 S100A7L2Q5SY68 101 aa12.21□□□□□ -0.45
SF1-213ENST00000472725 SLC25A34Q6PIV7 304 aa12.21□□□□□ -0.45
SF1-213ENST00000472725 C14orf144Q96I85 54 aa12.21□□□□□ -0.45
SF1-213ENST00000472725 TRBV10-3A0A0K0K1G6 114 aa12.2□□□□□ -0.46
SF1-213ENST00000472725 IGLV6-57P01721 117 aa12.2□□□□□ -0.46
SF1-213ENST00000472725 RPL28P46779 137 aaKnown RBP12.2□□□□□ -0.46
SF1-213ENST00000472725 MUSTN1Q8IVN3 82 aa12.2□□□□□ -0.46
SF1-213ENST00000472725 DIRC1Q969H9 104 aa12.2□□□□□ -0.46
SF1-213ENST00000472725 HIGD1BQ9P298 99 aa12.2□□□□□ -0.46
SF1-213ENST00000472725 OXTP01178 125 aa12.17□□□□□ -0.46
SF1-213ENST00000472725 SPRR1AP35321 89 aa12.17□□□□□ -0.46
SF1-213ENST00000472725 LINC00337Q8N6G1 96 aa12.16□□□□□ -0.46
SF1-213ENST00000472725 H0Y9J4 135 aa12.15□□□□□ -0.46
SF1-213ENST00000472725 UBE2AP49459 152 aa12.15□□□□□ -0.46
SF1-213ENST00000472725 KRTAP13-1Q8IUC0 172 aa12.15□□□□□ -0.46
SF1-213ENST00000472725 KRTAP29-1A8MX34 341 aaPredicted RBP12.14□□□□□ -0.47
SF1-213ENST00000472725 FAM19A1Q7Z5A9 133 aa12.14□□□□□ -0.47
SF1-213ENST00000472725 HIST1H4GQ99525 98 aa12.14□□□□□ -0.47
SF1-213ENST00000472725 FLG2Q5D862 2391 aaPredicted RBP12.13□□□□□ -0.47
SF1-213ENST00000472725 TRAV23DV6A0A075B6W5 121 aa12.12□□□□□ -0.47
SF1-213ENST00000472725 OR13C6PQ8NH95 151 aa12.12□□□□□ -0.47
SF1-213ENST00000472725 KRTAP4-16G5E9R7 235 aaPredicted RBP12.11□□□□□ -0.47
SF1-213ENST00000472725 SMIM6P0DI80 62 aa12.11□□□□□ -0.47
SF1-213ENST00000472725 TAL2Q16559 108 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms