RNA–Protein interactions for RNA: ENST00000471702.2

NPHP3-ACAD11-201, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene NPHP3-ACAD11, Length 7,784 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-201ENST00000471702 C6orf48Q9UBA6 75 aa9.46□□□□□ -0.89
NPHP3-ACAD11-201ENST00000471702 LINC00242Q5T6M2 205 aa9.46□□□□□ -0.89
NPHP3-ACAD11-201ENST00000471702 C11orf1Q9H5F2 150 aa9.46□□□□□ -0.89
NPHP3-ACAD11-201ENST00000471702 MAST4O15021 2626 aa9.46□□□□□ -0.9
NPHP3-ACAD11-201ENST00000471702 NHLRC4P0CG21 123 aaPredicted RBP9.46□□□□□ -0.9
NPHP3-ACAD11-201ENST00000471702 MGAM2Q2M2H8 2515 aa9.45□□□□□ -0.9
NPHP3-ACAD11-201ENST00000471702 C8orf87E5RJ46 101 aa9.45□□□□□ -0.9
NPHP3-ACAD11-201ENST00000471702 FSTL3O95633 263 aa9.45□□□□□ -0.9
NPHP3-ACAD11-201ENST00000471702 ZNF295-AS1Q8N0V1 137 aa9.45□□□□□ -0.9
NPHP3-ACAD11-201ENST00000471702 YPEL4Q96NS1 127 aa9.44□□□□□ -0.9
NPHP3-ACAD11-201ENST00000471702 POLR2KP53803 58 aaKnown RBP9.44□□□□□ -0.9
NPHP3-ACAD11-201ENST00000471702 Q96NJ1 140 aa9.44□□□□□ -0.9
NPHP3-ACAD11-201ENST00000471702 Q8N3U1 123 aa9.44□□□□□ -0.9
NPHP3-ACAD11-201ENST00000471702 CDIP1Q9H305 208 aa9.44□□□□□ -0.9
NPHP3-ACAD11-201ENST00000471702 C2orf91Q6ZV80 131 aa9.43□□□□□ -0.9
NPHP3-ACAD11-201ENST00000471702 CHTF8P0CG12 524 aa9.42□□□□□ -0.9
NPHP3-ACAD11-201ENST00000471702 IGLV1-51P01701 117 aa9.42□□□□□ -0.9
NPHP3-ACAD11-201ENST00000471702 ZNF580Q9UK33 172 aa9.42□□□□□ -0.9
NPHP3-ACAD11-201ENST00000471702 EIF4EBP1Q13541 118 aaPredicted RBP9.41□□□□□ -0.9
NPHP3-ACAD11-201ENST00000471702 SMIM1B2RUZ4 78 aa9.41□□□□□ -0.9
NPHP3-ACAD11-201ENST00000471702 C9orf129Q5T035 196 aaKnown RBP9.41□□□□□ -0.9
NPHP3-ACAD11-201ENST00000471702 LYPD5Q6UWN5 251 aa9.4□□□□□ -0.9
NPHP3-ACAD11-201ENST00000471702 DNAH12Q6ZR08 3092 aa9.4□□□□□ -0.9
NPHP3-ACAD11-201ENST00000471702 Q8N6K4 173 aa9.4□□□□□ -0.9
NPHP3-ACAD11-201ENST00000471702 Q6ZRU5 148 aa9.4□□□□□ -0.9
NPHP3-ACAD11-201ENST00000471702 FLNBO75369 2602 aaKnown RBP9.4□□□□□ -0.91
NPHP3-ACAD11-201ENST00000471702 AKAP13Q12802 2813 aa9.39□□□□□ -0.91
NPHP3-ACAD11-201ENST00000471702 SMCR5Q8TEV8 140 aa9.37□□□□□ -0.91
NPHP3-ACAD11-201ENST00000471702 M0R2T5 61 aa9.37□□□□□ -0.91
NPHP3-ACAD11-201ENST00000471702 Q6ZSN1 163 aa9.37□□□□□ -0.91
NPHP3-ACAD11-201ENST00000471702 IGIPA6NJ69 53 aa9.37□□□□□ -0.91
NPHP3-ACAD11-201ENST00000471702 ADAMTSL4-AS1Q5T5F5 129 aa9.37□□□□□ -0.91
NPHP3-ACAD11-201ENST00000471702 FHL3Q13643 280 aa9.36□□□□□ -0.91
NPHP3-ACAD11-201ENST00000471702 C22orf24Q9Y442 160 aa9.36□□□□□ -0.91
NPHP3-ACAD11-201ENST00000471702 CHCHD7Q9BUK0 85 aa9.35□□□□□ -0.91
NPHP3-ACAD11-201ENST00000471702 FAM19A4Q96LR4 140 aa9.35□□□□□ -0.91
NPHP3-ACAD11-201ENST00000471702 MUC7Q8TAX7 377 aa9.35□□□□□ -0.91
NPHP3-ACAD11-201ENST00000471702 CXCL6P80162 114 aa9.34□□□□□ -0.91
NPHP3-ACAD11-201ENST00000471702 CRIP3Q6Q6R5 217 aa9.33□□□□□ -0.92
NPHP3-ACAD11-201ENST00000471702 PCNTO95613 3336 aa9.33□□□□□ -0.92
NPHP3-ACAD11-201ENST00000471702 TP53AIP1Q9HCN2 124 aa9.33□□□□□ -0.92
NPHP3-ACAD11-201ENST00000471702 SPATA3Q8NHX4 192 aa9.32□□□□□ -0.92
NPHP3-ACAD11-201ENST00000471702 TSPEAR-AS2P59090 65 aa9.32□□□□□ -0.92
NPHP3-ACAD11-201ENST00000471702 RBM12B-AS1Q9P1G2 102 aa9.32□□□□□ -0.92
NPHP3-ACAD11-201ENST00000471702 EPM2AB3EWF7 344 aa9.3□□□□□ -0.92
NPHP3-ACAD11-201ENST00000471702 RPL37AP61513 92 aaKnown RBP9.3□□□□□ -0.92
NPHP3-ACAD11-201ENST00000471702 C5orf42Q9H799 3197 aa9.29□□□□□ -0.92
NPHP3-ACAD11-201ENST00000471702 TRAV22A0A0B4J277 110 aa9.29□□□□□ -0.92
NPHP3-ACAD11-201ENST00000471702 Q8N2B8 174 aa9.29□□□□□ -0.92
NPHP3-ACAD11-201ENST00000471702 IGLV6-57P01721 117 aa9.28□□□□□ -0.92
NPHP3-ACAD11-201ENST00000471702 PHF5AQ7RTV0 110 aaKnown RBP9.27□□□□□ -0.93
NPHP3-ACAD11-201ENST00000471702 A0A1W2PPR1 153 aa9.27□□□□□ -0.93
NPHP3-ACAD11-201ENST00000471702 SMIM29Q86T20 159 aa9.26□□□□□ -0.93
NPHP3-ACAD11-201ENST00000471702 LINC01600Q96MT4 127 aa9.26□□□□□ -0.93
NPHP3-ACAD11-201ENST00000471702 IGLV5-37A0A075B6J1 123 aa9.25□□□□□ -0.93
NPHP3-ACAD11-201ENST00000471702 C4orf26Q17RF5 130 aa9.24□□□□□ -0.93
NPHP3-ACAD11-201ENST00000471702 PLA2G2DQ9UNK4 145 aa9.24□□□□□ -0.93
NPHP3-ACAD11-201ENST00000471702 A0A1B0GUV1 79 aa9.24□□□□□ -0.93
NPHP3-ACAD11-201ENST00000471702 Q6ZRP5 223 aa9.24□□□□□ -0.93
NPHP3-ACAD11-201ENST00000471702 C16orf95Q9H693 158 aa9.23□□□□□ -0.93
NPHP3-ACAD11-201ENST00000471702 LINC00846Q9NV44 126 aa9.23□□□□□ -0.93
NPHP3-ACAD11-201ENST00000471702 CNFNQ9BYD5 112 aa9.23□□□□□ -0.93
NPHP3-ACAD11-201ENST00000471702 A0A0D9SG42 100 aa9.23□□□□□ -0.93
NPHP3-ACAD11-201ENST00000471702 C9orf92A6NGG3 77 aa9.23□□□□□ -0.93
NPHP3-ACAD11-201ENST00000471702 LINC00483Q53H64 154 aa9.22□□□□□ -0.93
NPHP3-ACAD11-201ENST00000471702 C8orf17Q9NRJ1 99 aa9.22□□□□□ -0.93
NPHP3-ACAD11-201ENST00000471702 LINC00167Q96N53 147 aa9.22□□□□□ -0.93
NPHP3-ACAD11-201ENST00000471702 F8WDY8 70 aa9.21□□□□□ -0.93
NPHP3-ACAD11-201ENST00000471702 RTL8CO15255 209 aa9.21□□□□□ -0.94
NPHP3-ACAD11-201ENST00000471702 ZNF575Q86XF7 245 aa9.21□□□□□ -0.94
NPHP3-ACAD11-201ENST00000471702 LINC00315P59091 139 aa9.2□□□□□ -0.94
NPHP3-ACAD11-201ENST00000471702 LAMA2P24043 3122 aaKnown RBP9.19□□□□□ -0.94
NPHP3-ACAD11-201ENST00000471702 AMELXQ99217 191 aa9.19□□□□□ -0.94
NPHP3-ACAD11-201ENST00000471702 LINC00310P59036 64 aa9.17□□□□□ -0.94
NPHP3-ACAD11-201ENST00000471702 PSORS1C2Q9UIG4 136 aa9.17□□□□□ -0.94
NPHP3-ACAD11-201ENST00000471702 PRO0628Q9UI54 55 aa9.16□□□□□ -0.94
NPHP3-ACAD11-201ENST00000471702 CFAP46Q8IYW2 2715 aa9.16□□□□□ -0.94
NPHP3-ACAD11-201ENST00000471702 CFAP54Q96N23 3096 aa9.16□□□□□ -0.94
NPHP3-ACAD11-201ENST00000471702 PRO3102Q9H379 93 aa9.15□□□□□ -0.94
NPHP3-ACAD11-201ENST00000471702 IGLV5-39A0A0G2JS06 123 aa9.15□□□□□ -0.95
NPHP3-ACAD11-201ENST00000471702 CAMK2N1Q7Z7J9 78 aa9.14□□□□□ -0.95
NPHP3-ACAD11-201ENST00000471702 URB1-AS1Q96HZ7 61 aa9.12□□□□□ -0.95
NPHP3-ACAD11-201ENST00000471702 KIF25-AS1Q9Y6Z4 181 aa9.12□□□□□ -0.95
NPHP3-ACAD11-201ENST00000471702 UQCR11O14957 56 aa9.11□□□□□ -0.95
NPHP3-ACAD11-201ENST00000471702 LINC00476Q8WZB0 136 aa9.11□□□□□ -0.95
NPHP3-ACAD11-201ENST00000471702 SMR3BP02814 79 aaPredicted RBP9.11□□□□□ -0.95
NPHP3-ACAD11-201ENST00000471702 Q8NBF4 154 aa9.1□□□□□ -0.95
NPHP3-ACAD11-201ENST00000471702 WIPF1O43516 503 aa9.1□□□□□ -0.95
NPHP3-ACAD11-201ENST00000471702 Q6ZQT0 140 aa9.1□□□□□ -0.95
NPHP3-ACAD11-201ENST00000471702 ST20-AS1Q8NBB2 130 aa9.1□□□□□ -0.95
NPHP3-ACAD11-201ENST00000471702 CENPEQ02224 2701 aa9.1□□□□□ -0.95
NPHP3-ACAD11-201ENST00000471702 MUC22E2RYF6 1773 aaPredicted RBP9.1□□□□□ -0.95
NPHP3-ACAD11-201ENST00000471702 NBDYA0A0U1RRE5 68 aa9.09□□□□□ -0.95
NPHP3-ACAD11-201ENST00000471702 KRTAP24-1Q3LI83 254 aa9.08□□□□□ -0.96
NPHP3-ACAD11-201ENST00000471702 IGLV5-48A0A075B6I7 105 aa9.08□□□□□ -0.96
NPHP3-ACAD11-201ENST00000471702 STAB1Q9NY15 2570 aa9.07□□□□□ -0.96
NPHP3-ACAD11-201ENST00000471702 OBSCN-AS1Q96MR7 158 aa9.07□□□□□ -0.96
NPHP3-ACAD11-201ENST00000471702 ITPR3Q14573 2671 aa9.06□□□□□ -0.96
NPHP3-ACAD11-201ENST00000471702 LINC00304Q8N9R0 145 aa9.06□□□□□ -0.96
NPHP3-ACAD11-201ENST00000471702 WWC2-AS2Q96NR7 200 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms