RNA–Protein interactions for RNA: ENST00000469778.1

SPTLC1-204, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 490 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-204ENST00000469778 FAM168BA1KXE4 195 aa7.9□□□□□ -1.14
SPTLC1-204ENST00000469778 M0QXV9 152 aa7.9□□□□□ -1.14
SPTLC1-204ENST00000469778 Q5VSD8 79 aa7.9□□□□□ -1.14
SPTLC1-204ENST00000469778 FAM19A5Q7Z5A7 132 aaPredicted RBP7.9□□□□□ -1.14
SPTLC1-204ENST00000469778 NKAPP1Q8N9T2 125 aa7.9□□□□□ -1.14
SPTLC1-204ENST00000469778 MIEN1Q9BRT3 115 aa7.9□□□□□ -1.14
SPTLC1-204ENST00000469778 C22orf24Q9Y442 160 aa7.9□□□□□ -1.14
SPTLC1-204ENST00000469778 HERC2O95714 4834 aa7.9□□□□□ -1.15
SPTLC1-204ENST00000469778 HSPG2P98160 4391 aa7.89□□□□□ -1.15
SPTLC1-204ENST00000469778 TMEM238C9JI98 176 aa7.89□□□□□ -1.15
SPTLC1-204ENST00000469778 RPL37AP61513 92 aaKnown RBP7.89□□□□□ -1.15
SPTLC1-204ENST00000469778 SCGB1D4Q6XE38 83 aa7.89□□□□□ -1.15
SPTLC1-204ENST00000469778 MRPL55Q7Z7F7 128 aaKnown RBP7.89□□□□□ -1.15
SPTLC1-204ENST00000469778 PPDPFQ9H3Y8 114 aa7.89□□□□□ -1.15
SPTLC1-204ENST00000469778 A0A0U1RRA0 63 aa7.88□□□□□ -1.15
SPTLC1-204ENST00000469778 SERTAD4-AS1Q5TG53 156 aa7.88□□□□□ -1.15
SPTLC1-204ENST00000469778 KRTAP7-1Q8IUC3 87 aa7.88□□□□□ -1.15
SPTLC1-204ENST00000469778 NDUFC2O95298 119 aa7.87□□□□□ -1.15
SPTLC1-204ENST00000469778 VPREB1P12018 145 aa7.87□□□□□ -1.15
SPTLC1-204ENST00000469778 PHF5AQ7RTV0 110 aaKnown RBP7.87□□□□□ -1.15
SPTLC1-204ENST00000469778 BOD1L2Q8IYS8 172 aa7.87□□□□□ -1.15
SPTLC1-204ENST00000469778 DLEU1O43261 78 aa7.86□□□□□ -1.15
SPTLC1-204ENST00000469778 IFITM1P13164 125 aa7.86□□□□□ -1.15
SPTLC1-204ENST00000469778 UBE2BP63146 152 aa7.86□□□□□ -1.15
SPTLC1-204ENST00000469778 PCP2Q8IVA1 136 aa7.86□□□□□ -1.15
SPTLC1-204ENST00000469778 LITAFQ99732 161 aa7.86□□□□□ -1.15
SPTLC1-204ENST00000469778 VAMP8Q9BV40 100 aa7.86□□□□□ -1.15
SPTLC1-204ENST00000469778 TRBV10-2A0A0K0K1G8 114 aa7.85□□□□□ -1.15
SPTLC1-204ENST00000469778 M0R378 163 aa7.85□□□□□ -1.15
SPTLC1-204ENST00000469778 ADAMTSL4-AS1Q5T5F5 129 aa7.85□□□□□ -1.15
SPTLC1-204ENST00000469778 SPANXDQ9BXN6 97 aa7.85□□□□□ -1.15
SPTLC1-204ENST00000469778 SPANXCQ9NY87 97 aa7.85□□□□□ -1.15
SPTLC1-204ENST00000469778 COX8AP10176 69 aa7.84□□□□□ -1.15
SPTLC1-204ENST00000469778 PRR3P79522 188 aaKnown RBP7.84□□□□□ -1.15
SPTLC1-204ENST00000469778 LINC00167Q96N53 147 aa7.84□□□□□ -1.15
SPTLC1-204ENST00000469778 TTTY13Q9BZ97 58 aa7.84□□□□□ -1.15
SPTLC1-204ENST00000469778 CBY1Q9Y3M2 126 aa7.84□□□□□ -1.15
SPTLC1-204ENST00000469778 KRTAP10-4P60372 401 aaPredicted RBP7.83□□□□□ -1.16
SPTLC1-204ENST00000469778 S100A12P80511 92 aa7.83□□□□□ -1.16
SPTLC1-204ENST00000469778 PYY3Q5JQD4 70 aa7.83□□□□□ -1.16
SPTLC1-204ENST00000469778 LINC00518Q8N0U6 118 aa7.83□□□□□ -1.16
SPTLC1-204ENST00000469778 DAND5Q8N907 189 aa7.83□□□□□ -1.16
SPTLC1-204ENST00000469778 LINC00308Q8TCZ7 52 aa7.83□□□□□ -1.16
SPTLC1-204ENST00000469778 SPANXB1Q9NS25 103 aaPredicted RBP7.83□□□□□ -1.16
SPTLC1-204ENST00000469778 PSORS1C2Q9UIG4 136 aa7.83□□□□□ -1.16
SPTLC1-204ENST00000469778 SPATA45Q537H7 98 aa7.82□□□□□ -1.16
SPTLC1-204ENST00000469778 PAM16Q9Y3D7 125 aa7.82□□□□□ -1.16
SPTLC1-204ENST00000469778 IGLV1-50A0A075B6I6 118 aa7.81□□□□□ -1.16
SPTLC1-204ENST00000469778 KRTAP17-1Q9BYP8 105 aa7.81□□□□□ -1.16
SPTLC1-204ENST00000469778 SRSF9Q13242 221 aaKnown RBP eCLIP7.8□□□□□ -1.16
SPTLC1-204ENST00000469778 C1orf137Q5JT78 98 aa7.8□□□□□ -1.16
SPTLC1-204ENST00000469778 SRRM2Q9UQ35 2752 aaKnown RBP7.8□□□□□ -1.16
SPTLC1-204ENST00000469778 VPS13BQ7Z7G8 4022 aa7.8□□□□□ -1.16
SPTLC1-204ENST00000469778 RPL37AP8A6NKH3 93 aa7.79□□□□□ -1.16
SPTLC1-204ENST00000469778 INAFM2P0DMQ5 153 aa7.79□□□□□ -1.16
SPTLC1-204ENST00000469778 SLC25A34Q6PIV7 304 aa7.79□□□□□ -1.16
SPTLC1-204ENST00000469778 SPINK6Q6UWN8 80 aa7.79□□□□□ -1.16
SPTLC1-204ENST00000469778 SOSTDC1Q6X4U4 206 aa7.79□□□□□ -1.16
SPTLC1-204ENST00000469778 Q8NDZ9 215 aa7.79□□□□□ -1.16
SPTLC1-204ENST00000469778 GAGE10A6NGK3 116 aa7.78□□□□□ -1.16
SPTLC1-204ENST00000469778 IGLV7-43P04211 117 aa7.78□□□□□ -1.16
SPTLC1-204ENST00000469778 KCNQ1DNQ9H478 68 aa7.78□□□□□ -1.16
SPTLC1-204ENST00000469778 HIGD1BQ9P298 99 aa7.78□□□□□ -1.16
SPTLC1-204ENST00000469778 BCE1O60756 84 aa7.77□□□□□ -1.17
SPTLC1-204ENST00000469778 S100A7L2Q5SY68 101 aa7.77□□□□□ -1.17
SPTLC1-204ENST00000469778 C14orf144Q96I85 54 aa7.77□□□□□ -1.17
SPTLC1-204ENST00000469778 KRTAP4-5Q9BYR2 181 aa7.77□□□□□ -1.17
SPTLC1-204ENST00000469778 TMEM126AQ9H061 195 aa7.77□□□□□ -1.17
SPTLC1-204ENST00000469778 PRYO14603 147 aa7.76□□□□□ -1.17
SPTLC1-204ENST00000469778 RPL28P46779 137 aaKnown RBP7.76□□□□□ -1.17
SPTLC1-204ENST00000469778 REG3GQ6UW15 175 aa7.76□□□□□ -1.17
SPTLC1-204ENST00000469778 KRTAP11-1Q8IUC1 163 aa7.76□□□□□ -1.17
SPTLC1-204ENST00000469778 MUSTN1Q8IVN3 82 aa7.76□□□□□ -1.17
SPTLC1-204ENST00000469778 FAT1Q14517 4588 aa7.76□□□□□ -1.17
SPTLC1-204ENST00000469778 IGKV2-28A0A075B6P5 120 aa7.75□□□□□ -1.17
SPTLC1-204ENST00000469778 H0Y9J4 135 aa7.75□□□□□ -1.17
SPTLC1-204ENST00000469778 NCR3O14931 201 aa7.75□□□□□ -1.17
SPTLC1-204ENST00000469778 EIF4EBP3O60516 100 aaPredicted RBP7.75□□□□□ -1.17
SPTLC1-204ENST00000469778 IGKV2D-28P01615 120 aa7.75□□□□□ -1.17
SPTLC1-204ENST00000469778 IGLV6-57P01721 117 aa7.75□□□□□ -1.17
SPTLC1-204ENST00000469778 SMIM6P0DI80 62 aa7.75□□□□□ -1.17
SPTLC1-204ENST00000469778 DDTP30046 118 aa7.75□□□□□ -1.17
SPTLC1-204ENST00000469778 NPC2P61916 151 aa7.75□□□□□ -1.17
SPTLC1-204ENST00000469778 DIRC1Q969H9 104 aa7.75□□□□□ -1.17
SPTLC1-204ENST00000469778 ZNF861PO60384 105 aa7.74□□□□□ -1.17
SPTLC1-204ENST00000469778 TAL2Q16559 108 aa7.74□□□□□ -1.17
SPTLC1-204ENST00000469778 LINC00337Q8N6G1 96 aa7.74□□□□□ -1.17
SPTLC1-204ENST00000469778 HIST1H4GQ99525 98 aa7.74□□□□□ -1.17
SPTLC1-204ENST00000469778 TRBV10-3A0A0K0K1G6 114 aa7.73□□□□□ -1.17
SPTLC1-204ENST00000469778 SPRR1AP35321 89 aa7.73□□□□□ -1.17
SPTLC1-204ENST00000469778 TRAV13-2A0A0B4J235 113 aa7.72□□□□□ -1.17
SPTLC1-204ENST00000469778 UQCR10Q9UDW1 63 aa7.72□□□□□ -1.17
SPTLC1-204ENST00000469778 OXTP01178 125 aa7.71□□□□□ -1.18
SPTLC1-204ENST00000469778 UBE2AP49459 152 aa7.71□□□□□ -1.18
SPTLC1-204ENST00000469778 HINT1P49773 126 aaPredicted RBP7.71□□□□□ -1.18
SPTLC1-204ENST00000469778 HNRNPA3P51991 378 aaKnown RBP7.71□□□□□ -1.18
SPTLC1-204ENST00000469778 PCLOQ9Y6V0 5065 aa7.71□□□□□ -1.18
SPTLC1-204ENST00000469778 TRAV23DV6A0A075B6W5 121 aa7.7□□□□□ -1.18
SPTLC1-204ENST00000469778 KRTAP13-1Q8IUC0 172 aa7.7□□□□□ -1.18
SPTLC1-204ENST00000469778 OR13C6PQ8NH95 151 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms