RNA–Protein interactions for RNA: ENST00000468777.5

PCCB-208, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene PCCB, Length 1,877 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-208ENST00000468777 H3BUT2 72 aa12.31□□□□□ -0.44
PCCB-208ENST00000468777 C9orf163Q8N9P6 203 aa12.31□□□□□ -0.44
PCCB-208ENST00000468777 COPS9Q8WXC6 57 aa12.31□□□□□ -0.44
PCCB-208ENST00000468777 LINC00308Q8TCZ7 52 aa12.3□□□□□ -0.44
PCCB-208ENST00000468777 CAMK2N2Q96S95 79 aa12.3□□□□□ -0.44
PCCB-208ENST00000468777 LINC00158P58513 81 aa12.29□□□□□ -0.44
PCCB-208ENST00000468777 Q6ZRU5 148 aa12.29□□□□□ -0.44
PCCB-208ENST00000468777 ERG28Q9UKR5 140 aa12.29□□□□□ -0.44
PCCB-208ENST00000468777 RYR1P21817 5038 aa12.29□□□□□ -0.44
PCCB-208ENST00000468777 SYCNQ0VAF6 134 aa12.29□□□□□ -0.44
PCCB-208ENST00000468777 CARD19Q96LW7 228 aa12.29□□□□□ -0.44
PCCB-208ENST00000468777 NAA38Q9BRA0 125 aaKnown RBP12.29□□□□□ -0.44
PCCB-208ENST00000468777 EIF4EBP3O60516 100 aaPredicted RBP12.28□□□□□ -0.44
PCCB-208ENST00000468777 MIR7-3HGQ8N6C7 128 aa12.28□□□□□ -0.44
PCCB-208ENST00000468777 PFN2P35080 140 aa12.27□□□□□ -0.44
PCCB-208ENST00000468777 C2orf48Q96LS8 159 aa12.27□□□□□ -0.44
PCCB-208ENST00000468777 FAM30AQ9NZY2 134 aa12.27□□□□□ -0.44
PCCB-208ENST00000468777 A0A0B4J2C4 111 aa12.27□□□□□ -0.45
PCCB-208ENST00000468777 VAMP3Q15836 100 aa12.27□□□□□ -0.45
PCCB-208ENST00000468777 C10orf25Q5T742 122 aa12.27□□□□□ -0.45
PCCB-208ENST00000468777 HSPG2P98160 4391 aa12.27□□□□□ -0.45
PCCB-208ENST00000468777 SOSTDC1Q6X4U4 206 aa12.26□□□□□ -0.45
PCCB-208ENST00000468777 HAMPP81172 84 aa12.25□□□□□ -0.45
PCCB-208ENST00000468777 UNQ6190/PRO20217Q6UXQ8 127 aa12.25□□□□□ -0.45
PCCB-208ENST00000468777 PPDPFQ9H3Y8 114 aa12.25□□□□□ -0.45
PCCB-208ENST00000468777 PRO1854Q9UHT4 67 aa12.25□□□□□ -0.45
PCCB-208ENST00000468777 SDIM1Q6ZPB5 146 aa12.25□□□□□ -0.45
PCCB-208ENST00000468777 A0A1W2PPM0 123 aa12.24□□□□□ -0.45
PCCB-208ENST00000468777 COX17Q14061 63 aa12.24□□□□□ -0.45
PCCB-208ENST00000468777 FABP2P12104 132 aa12.22□□□□□ -0.45
PCCB-208ENST00000468777 PANO1I0J062 215 aa12.21□□□□□ -0.45
PCCB-208ENST00000468777 TSPAN13O95857 204 aa12.21□□□□□ -0.45
PCCB-208ENST00000468777 CHTF8P0CG12 524 aa12.21□□□□□ -0.45
PCCB-208ENST00000468777 C6orf48Q9UBA6 75 aa12.21□□□□□ -0.45
PCCB-208ENST00000468777 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.21□□□□□ -0.46
PCCB-208ENST00000468777 C9orf116Q5BN46 136 aaPredicted RBP12.2□□□□□ -0.46
PCCB-208ENST00000468777 Q6ZSA8 131 aa12.2□□□□□ -0.46
PCCB-208ENST00000468777 IGKV2-24A0A0C4DH68 120 aa12.19□□□□□ -0.46
PCCB-208ENST00000468777 F8WDY8 70 aa12.19□□□□□ -0.46
PCCB-208ENST00000468777 XGP55808 180 aa12.19□□□□□ -0.46
PCCB-208ENST00000468777 UBE2V1Q13404 147 aa12.18□□□□□ -0.46
PCCB-208ENST00000468777 SND1-IT1Q9HBX3 110 aa12.18□□□□□ -0.46
PCCB-208ENST00000468777 A0A096LNI7 61 aa12.17□□□□□ -0.46
PCCB-208ENST00000468777 GAGE10A6NGK3 116 aa12.17□□□□□ -0.46
PCCB-208ENST00000468777 H7C2G1 150 aa12.17□□□□□ -0.46
PCCB-208ENST00000468777 SPCS1Q9Y6A9 102 aa12.17□□□□□ -0.46
PCCB-208ENST00000468777 CDK2AP2O75956 126 aa12.17□□□□□ -0.46
PCCB-208ENST00000468777 FAT1Q14517 4588 aa12.16□□□□□ -0.46
PCCB-208ENST00000468777 RPL18AQ02543 176 aaKnown RBP12.16□□□□□ -0.46
PCCB-208ENST00000468777 GTF2H5Q6ZYL4 71 aa12.16□□□□□ -0.46
PCCB-208ENST00000468777 TRBV30A0A0K0K1B3 111 aa12.15□□□□□ -0.46
PCCB-208ENST00000468777 K7EP34 96 aa12.15□□□□□ -0.46
PCCB-208ENST00000468777 GAGE2BQ13066 116 aa12.15□□□□□ -0.46
PCCB-208ENST00000468777 Q1RN00 199 aa12.15□□□□□ -0.46
PCCB-208ENST00000468777 RNF151Q2KHN1 245 aa12.15□□□□□ -0.46
PCCB-208ENST00000468777 HERC2O95714 4834 aa12.15□□□□□ -0.46
PCCB-208ENST00000468777 LOC107984640A0A0U1RRK4 108 aa12.14□□□□□ -0.47
PCCB-208ENST00000468777 SCXQ7RTU7 201 aa12.14□□□□□ -0.47
PCCB-208ENST00000468777 LOC107984156A0A0G2JMH3 177 aa12.14□□□□□ -0.47
PCCB-208ENST00000468777 ARL17AQ8IVW1 177 aa12.14□□□□□ -0.47
PCCB-208ENST00000468777 RPL13AP40429 203 aaKnown RBP12.13□□□□□ -0.47
PCCB-208ENST00000468777 Q6ZRP5 223 aa12.13□□□□□ -0.47
PCCB-208ENST00000468777 CIRBP-AS1Q8TBR5 109 aa12.13□□□□□ -0.47
PCCB-208ENST00000468777 SPACA4Q8TDM5 124 aa12.12□□□□□ -0.47
PCCB-208ENST00000468777 DPH3Q96FX2 82 aa12.12□□□□□ -0.47
PCCB-208ENST00000468777 PSMB2P49721 201 aa12.12□□□□□ -0.47
PCCB-208ENST00000468777 LYRM7Q5U5X0 104 aa12.12□□□□□ -0.47
PCCB-208ENST00000468777 IGKV2-28A0A075B6P5 120 aa12.1□□□□□ -0.47
PCCB-208ENST00000468777 TRAV13-2A0A0B4J235 113 aa12.1□□□□□ -0.47
PCCB-208ENST00000468777 IGKV2D-28P01615 120 aa12.1□□□□□ -0.47
PCCB-208ENST00000468777 GAGE2EQ4V326 116 aa12.1□□□□□ -0.47
PCCB-208ENST00000468777 GAGE2DQ9UEU5 116 aa12.1□□□□□ -0.47
PCCB-208ENST00000468777 TLX1NBP0CAT3 122 aa12.1□□□□□ -0.47
PCCB-208ENST00000468777 NDUFC2-KCTD14E9PQ53 114 aa12.09□□□□□ -0.47
PCCB-208ENST00000468777 SMR3BP02814 79 aaPredicted RBP12.09□□□□□ -0.47
PCCB-208ENST00000468777 SCGB1C2P0DMR2 95 aa12.09□□□□□ -0.47
PCCB-208ENST00000468777 PKIGQ9Y2B9 76 aa12.09□□□□□ -0.47
PCCB-208ENST00000468777 A0A087WYN8 130 aa12.08□□□□□ -0.48
PCCB-208ENST00000468777 LINC00337Q8N6G1 96 aa12.08□□□□□ -0.48
PCCB-208ENST00000468777 KRTAP17-1Q9BYP8 105 aa12.08□□□□□ -0.48
PCCB-208ENST00000468777 NDUFC2O95298 119 aa12.07□□□□□ -0.48
PCCB-208ENST00000468777 TRIAP1O43715 76 aa12.06□□□□□ -0.48
PCCB-208ENST00000468777 LINC00474Q9P2X8 69 aa12.06□□□□□ -0.48
PCCB-208ENST00000468777 COX6CP09669 75 aa12.04□□□□□ -0.48
PCCB-208ENST00000468777 XAGE1AQ9HD64 81 aa12.04□□□□□ -0.48
PCCB-208ENST00000468777 TRBV20-1A0A075B6N2 111 aa12.04□□□□□ -0.48
PCCB-208ENST00000468777 H3BMG7 143 aa12.04□□□□□ -0.48
PCCB-208ENST00000468777 VPS13BQ7Z7G8 4022 aa12.03□□□□□ -0.48
PCCB-208ENST00000468777 A0A1W2PNN7 141 aa12.03□□□□□ -0.48
PCCB-208ENST00000468777 FAM168BA1KXE4 195 aa12.03□□□□□ -0.48
PCCB-208ENST00000468777 C9orf129Q5T035 196 aaKnown RBP12.03□□□□□ -0.48
PCCB-208ENST00000468777 TCL1BO95988 128 aa12.02□□□□□ -0.48
PCCB-208ENST00000468777 PRR3P79522 188 aaKnown RBP12.02□□□□□ -0.48
PCCB-208ENST00000468777 OR13C6PQ8NH95 151 aa12.02□□□□□ -0.48
PCCB-208ENST00000468777 PLAC8Q9NZF1 115 aa12.02□□□□□ -0.48
PCCB-208ENST00000468777 Q8NDZ9 215 aa12.01□□□□□ -0.49
PCCB-208ENST00000468777 RPL28P46779 137 aaKnown RBP11.98□□□□□ -0.49
PCCB-208ENST00000468777 FAM19A5Q7Z5A7 132 aaPredicted RBP11.98□□□□□ -0.49
PCCB-208ENST00000468777 NCR3O14931 201 aa11.97□□□□□ -0.49
PCCB-208ENST00000468777 KRTAP7-1Q8IUC3 87 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms