RNA–Protein interactions for RNA: ENST00000468468.5

TSPAN4-211, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-211ENST00000468468 DEFB135Q30KP9 77 aa10.81□□□□□ -0.68
TSPAN4-211ENST00000468468 REG3AQ06141 175 aa10.81□□□□□ -0.68
TSPAN4-211ENST00000468468 LINC00846Q9NV44 126 aa10.81□□□□□ -0.68
TSPAN4-211ENST00000468468 C9orf116Q5BN46 136 aaPredicted RBP10.8□□□□□ -0.68
TSPAN4-211ENST00000468468 COX17Q14061 63 aa10.8□□□□□ -0.68
TSPAN4-211ENST00000468468 FLNBO75369 2602 aaKnown RBP10.79□□□□□ -0.68
TSPAN4-211ENST00000468468 NDUFC2O95298 119 aa10.79□□□□□ -0.68
TSPAN4-211ENST00000468468 F8P00451 2351 aa10.79□□□□□ -0.68
TSPAN4-211ENST00000468468 DAD1P61803 113 aa10.78□□□□□ -0.68
TSPAN4-211ENST00000468468 Q8N814 137 aa10.78□□□□□ -0.68
TSPAN4-211ENST00000468468 SERP2Q8N6R1 65 aa10.77□□□□□ -0.68
TSPAN4-211ENST00000468468 LINC00167Q96N53 147 aa10.77□□□□□ -0.68
TSPAN4-211ENST00000468468 IGHV4-28A0A0C4DH34 117 aa10.77□□□□□ -0.69
TSPAN4-211ENST00000468468 Q6JHZ5 121 aa10.76□□□□□ -0.69
TSPAN4-211ENST00000468468 CCKP06307 115 aa10.74□□□□□ -0.69
TSPAN4-211ENST00000468468 Q8NDZ9 215 aa10.74□□□□□ -0.69
TSPAN4-211ENST00000468468 CELA1Q9UNI1 258 aa10.74□□□□□ -0.69
TSPAN4-211ENST00000468468 USP17L23D6RBM5 183 aa10.74□□□□□ -0.69
TSPAN4-211ENST00000468468 APOC4P55056 127 aa10.74□□□□□ -0.69
TSPAN4-211ENST00000468468 C6orf99Q4VX62 202 aa10.73□□□□□ -0.69
TSPAN4-211ENST00000468468 JMJD7-PLA2G4BH0Y9G9 81 aa10.73□□□□□ -0.69
TSPAN4-211ENST00000468468 TMEM256-PLSCR3K7ERE1 68 aa10.73□□□□□ -0.69
TSPAN4-211ENST00000468468 C6orf223Q8N319 242 aa10.73□□□□□ -0.69
TSPAN4-211ENST00000468468 HTN3P15516 51 aa10.72□□□□□ -0.69
TSPAN4-211ENST00000468468 S100A7L2Q5SY68 101 aa10.72□□□□□ -0.69
TSPAN4-211ENST00000468468 C10orf25Q5T742 122 aa10.72□□□□□ -0.69
TSPAN4-211ENST00000468468 UNQ6190/PRO20217Q6UXQ8 127 aa10.72□□□□□ -0.69
TSPAN4-211ENST00000468468 SPAG11BQ08648 103 aa10.71□□□□□ -0.69
TSPAN4-211ENST00000468468 WFDC9Q8NEX5 89 aa10.71□□□□□ -0.69
TSPAN4-211ENST00000468468 LINC00336Q6ZUF6 198 aa10.71□□□□□ -0.7
TSPAN4-211ENST00000468468 Q8NAQ8 132 aa10.7□□□□□ -0.7
TSPAN4-211ENST00000468468 MRAPQ8TCY5 172 aa10.7□□□□□ -0.7
TSPAN4-211ENST00000468468 LELP1Q5T871 98 aa10.69□□□□□ -0.7
TSPAN4-211ENST00000468468 KLK12Q9UKR0 248 aa10.68□□□□□ -0.7
TSPAN4-211ENST00000468468 CYSRT1A8MQ03 144 aa10.68□□□□□ -0.7
TSPAN4-211ENST00000468468 SPART-AS1P0CW21 52 aa10.68□□□□□ -0.7
TSPAN4-211ENST00000468468 MIFP14174 115 aa10.68□□□□□ -0.7
TSPAN4-211ENST00000468468 LINC00575Q6W349 94 aa10.68□□□□□ -0.7
TSPAN4-211ENST00000468468 IGHV4-30-4P0DP06 118 aa10.67□□□□□ -0.7
TSPAN4-211ENST00000468468 C1orf43Q9BWL3 253 aa10.67□□□□□ -0.7
TSPAN4-211ENST00000468468 PKIGQ9Y2B9 76 aa10.67□□□□□ -0.7
TSPAN4-211ENST00000468468 KRTAP24-1Q3LI83 254 aa10.66□□□□□ -0.7
TSPAN4-211ENST00000468468 FBN1P35555 2871 aaKnown RBP10.65□□□□□ -0.7
TSPAN4-211ENST00000468468 A0A0J9YWU9 116 aa10.65□□□□□ -0.7
TSPAN4-211ENST00000468468 MUC7Q8TAX7 377 aa10.65□□□□□ -0.71
TSPAN4-211ENST00000468468 PRR34Q9NV39 138 aa10.64□□□□□ -0.71
TSPAN4-211ENST00000468468 TRAV23DV6A0A075B6W5 121 aa10.64□□□□□ -0.71
TSPAN4-211ENST00000468468 ENHOQ6UWT2 76 aa10.64□□□□□ -0.71
TSPAN4-211ENST00000468468 C20orf197Q8N268 126 aa10.63□□□□□ -0.71
TSPAN4-211ENST00000468468 GHRHP01286 108 aa10.63□□□□□ -0.71
TSPAN4-211ENST00000468468 PRO0628Q9UI54 55 aa10.62□□□□□ -0.71
TSPAN4-211ENST00000468468 IGLV6-57P01721 117 aa10.62□□□□□ -0.71
TSPAN4-211ENST00000468468 RBM3P98179 157 aaKnown RBP10.6□□□□□ -0.71
TSPAN4-211ENST00000468468 LAMTOR3Q9UHA4 124 aa10.6□□□□□ -0.71
TSPAN4-211ENST00000468468 ZNF561-AS1K7EIQ3 104 aa10.6□□□□□ -0.71
TSPAN4-211ENST00000468468 KRTAP10-11P60412 298 aa10.6□□□□□ -0.71
TSPAN4-211ENST00000468468 ATP5EP2Q5VTU8 51 aa10.6□□□□□ -0.71
TSPAN4-211ENST00000468468 LYPD5Q6UWN5 251 aa10.6□□□□□ -0.71
TSPAN4-211ENST00000468468 UBL5Q9BZL1 73 aa10.6□□□□□ -0.71
TSPAN4-211ENST00000468468 C6orf48Q9UBA6 75 aa10.6□□□□□ -0.71
TSPAN4-211ENST00000468468 FAM236DA0A1B0GTK5 79 aa10.59□□□□□ -0.71
TSPAN4-211ENST00000468468 FAM236CP0DP71 79 aa10.59□□□□□ -0.71
TSPAN4-211ENST00000468468 FAM19A1Q7Z5A9 133 aa10.59□□□□□ -0.71
TSPAN4-211ENST00000468468 STAB1Q9NY15 2570 aa10.59□□□□□ -0.71
TSPAN4-211ENST00000468468 XAGE1AQ9HD64 81 aa10.59□□□□□ -0.71
TSPAN4-211ENST00000468468 GVQW2A0A096LPI5 108 aaPredicted RBP10.58□□□□□ -0.72
TSPAN4-211ENST00000468468 Q6ZQT0 140 aa10.58□□□□□ -0.72
TSPAN4-211ENST00000468468 TRBV10-3A0A0K0K1G6 114 aa10.58□□□□□ -0.72
TSPAN4-211ENST00000468468 Q6ZQY7 126 aa10.57□□□□□ -0.72
TSPAN4-211ENST00000468468 RETNQ9HD89 108 aa10.57□□□□□ -0.72
TSPAN4-211ENST00000468468 PKD1L1Q8TDX9 2849 aa10.57□□□□□ -0.72
TSPAN4-211ENST00000468468 LOC110117498A0A087WWA1 95 aa10.55□□□□□ -0.72
TSPAN4-211ENST00000468468 DIRC1Q969H9 104 aa10.55□□□□□ -0.72
TSPAN4-211ENST00000468468 F8WDY8 70 aa10.54□□□□□ -0.72
TSPAN4-211ENST00000468468 M0R2N4 97 aa10.54□□□□□ -0.72
TSPAN4-211ENST00000468468 HIGD2BQ4VC39 106 aa10.54□□□□□ -0.72
TSPAN4-211ENST00000468468 ANK2Q01484 3957 aa10.54□□□□□ -0.72
TSPAN4-211ENST00000468468 WFDC10BQ8IUB3 73 aa10.53□□□□□ -0.72
TSPAN4-211ENST00000468468 CMYA5Q8N3K9 4069 aa10.53□□□□□ -0.72
TSPAN4-211ENST00000468468 FP248Q71RG6 208 aaPredicted RBP10.53□□□□□ -0.72
TSPAN4-211ENST00000468468 CAMK2N2Q96S95 79 aa10.52□□□□□ -0.73
TSPAN4-211ENST00000468468 MAST4O15021 2626 aa10.52□□□□□ -0.73
TSPAN4-211ENST00000468468 A0A0U1RQV1 116 aa10.52□□□□□ -0.73
TSPAN4-211ENST00000468468 H7BZZ5 65 aa10.52□□□□□ -0.73
TSPAN4-211ENST00000468468 ZNF73O43830 326 aaPredicted RBP10.52□□□□□ -0.73
TSPAN4-211ENST00000468468 NDUFC2-KCTD14E9PQ53 114 aa10.51□□□□□ -0.73
TSPAN4-211ENST00000468468 EPM2AB3EWF7 344 aa10.51□□□□□ -0.73
TSPAN4-211ENST00000468468 COX7BP24311 80 aa10.51□□□□□ -0.73
TSPAN4-211ENST00000468468 SERP1Q9Y6X1 66 aa10.51□□□□□ -0.73
TSPAN4-211ENST00000468468 H3BQ85 93 aa10.5□□□□□ -0.73
TSPAN4-211ENST00000468468 KPRPQ5T749 579 aaPredicted RBP10.5□□□□□ -0.73
TSPAN4-211ENST00000468468 LINC00474Q9P2X8 69 aa10.5□□□□□ -0.73
TSPAN4-211ENST00000468468 SNURFQ9Y675 71 aa10.5□□□□□ -0.73
TSPAN4-211ENST00000468468 EGFEM1PQ0D2K5 195 aa10.49□□□□□ -0.73
TSPAN4-211ENST00000468468 VPREB1P12018 145 aa10.48□□□□□ -0.73
TSPAN4-211ENST00000468468 HAMPP81172 84 aa10.48□□□□□ -0.73
TSPAN4-211ENST00000468468 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.48□□□□□ -0.73
TSPAN4-211ENST00000468468 PDE6GP18545 87 aa10.48□□□□□ -0.73
TSPAN4-211ENST00000468468 ELOF1P60002 83 aaKnown RBP10.48□□□□□ -0.73
TSPAN4-211ENST00000468468 KRTAP26-1Q6PEX3 210 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 269.1 ms