RNA–Protein interactions for RNA: ENST00000467272.6

UBR4-211, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-211ENST00000467272 KRTAP4-16G5E9R7 235 aaPredicted RBP6.74□□□□□ -1.33
UBR4-211ENST00000467272 PFN2P35080 140 aa6.74□□□□□ -1.33
UBR4-211ENST00000467272 RPL24P83731 157 aaKnown RBP6.74□□□□□ -1.33
UBR4-211ENST00000467272 Q8N377 158 aa6.74□□□□□ -1.33
UBR4-211ENST00000467272 HIGD2AQ9BW72 106 aa6.74□□□□□ -1.33
UBR4-211ENST00000467272 ERG28Q9UKR5 140 aa6.74□□□□□ -1.33
UBR4-211ENST00000467272 SPRR1AP35321 89 aa6.73□□□□□ -1.33
UBR4-211ENST00000467272 LINC01549A6NIU2 74 aa6.72□□□□□ -1.33
UBR4-211ENST00000467272 IGLC3P0DOY3 106 aa6.72□□□□□ -1.33
UBR4-211ENST00000467272 PMVKQ15126 192 aa6.72□□□□□ -1.33
UBR4-211ENST00000467272 ANAPC16Q96DE5 110 aa6.72□□□□□ -1.33
UBR4-211ENST00000467272 ZNF706Q9Y5V0 76 aaPredicted RBP6.72□□□□□ -1.33
UBR4-211ENST00000467272 RAB14P61106 215 aa6.71□□□□□ -1.34
UBR4-211ENST00000467272 ZNF625Q96I27 306 aaPredicted RBP6.71□□□□□ -1.34
UBR4-211ENST00000467272 H3BRM9 83 aa6.7□□□□□ -1.34
UBR4-211ENST00000467272 CFC1BP0CG36 223 aa6.7□□□□□ -1.34
UBR4-211ENST00000467272 KRTAP10-6P60371 365 aaPredicted RBP6.7□□□□□ -1.34
UBR4-211ENST00000467272 SMCR5Q8TEV8 140 aa6.7□□□□□ -1.34
UBR4-211ENST00000467272 MT-ND4LP03901 98 aa6.69□□□□□ -1.34
UBR4-211ENST00000467272 ZNF22P17026 224 aaPredicted RBP6.69□□□□□ -1.34
UBR4-211ENST00000467272 KCNQ1DNQ9H478 68 aa6.69□□□□□ -1.34
UBR4-211ENST00000467272 SSPOA2VEC9 5147 aa6.69□□□□□ -1.34
UBR4-211ENST00000467272 KIAA1644Q3SXP7 199 aa6.68□□□□□ -1.34
UBR4-211ENST00000467272 USH2AO75445 5202 aa6.68□□□□□ -1.34
UBR4-211ENST00000467272 A0A096LNJ9 63 aa6.67□□□□□ -1.34
UBR4-211ENST00000467272 A0A1B0GVG6 124 aa6.67□□□□□ -1.34
UBR4-211ENST00000467272 FAM19A2Q8N3H0 131 aa6.67□□□□□ -1.34
UBR4-211ENST00000467272 hCG_2014768A0A024R1R8 64 aa6.66□□□□□ -1.34
UBR4-211ENST00000467272 PRYO14603 147 aa6.66□□□□□ -1.34
UBR4-211ENST00000467272 SLC25A20O43772 301 aa6.66□□□□□ -1.34
UBR4-211ENST00000467272 SSBP3-AS1Q7Z2R9 100 aa6.66□□□□□ -1.34
UBR4-211ENST00000467272 SMCPP49901 116 aaPredicted RBP6.65□□□□□ -1.34
UBR4-211ENST00000467272 SFTA2Q6UW10 78 aa6.65□□□□□ -1.34
UBR4-211ENST00000467272 NDUFA12Q9UI09 145 aa6.65□□□□□ -1.34
UBR4-211ENST00000467272 ERC2-IT1O76042 136 aa6.63□□□□□ -1.35
UBR4-211ENST00000467272 C11orf86A6NJI1 115 aa6.62□□□□□ -1.35
UBR4-211ENST00000467272 MOBPQ13875 183 aa6.62□□□□□ -1.35
UBR4-211ENST00000467272 TRAV9-1A0A075B6T8 112 aa6.61□□□□□ -1.35
UBR4-211ENST00000467272 B5MCH6 92 aa6.61□□□□□ -1.35
UBR4-211ENST00000467272 PCOTHQ58A44 107 aa6.61□□□□□ -1.35
UBR4-211ENST00000467272 URB1-AS1Q96HZ7 61 aa6.61□□□□□ -1.35
UBR4-211ENST00000467272 GAGE2AQ6NT46 116 aa6.6□□□□□ -1.35
UBR4-211ENST00000467272 Q9BRP9 147 aa6.6□□□□□ -1.35
UBR4-211ENST00000467272 TRBV10-3A0A0K0K1G6 114 aa6.59□□□□□ -1.35
UBR4-211ENST00000467272 LCE2BO14633 110 aa6.59□□□□□ -1.35
UBR4-211ENST00000467272 LINC00158P58513 81 aa6.59□□□□□ -1.35
UBR4-211ENST00000467272 IGLV8-61A0A075B6I0 122 aa6.58□□□□□ -1.36
UBR4-211ENST00000467272 IGLV9-49A0A0B4J1Y8 123 aa6.58□□□□□ -1.36
UBR4-211ENST00000467272 ETDCA0A1B0GVM5 59 aa6.58□□□□□ -1.36
UBR4-211ENST00000467272 BOD1L2Q8IYS8 172 aa6.58□□□□□ -1.36
UBR4-211ENST00000467272 LOC107984156A0A0G2JMH3 177 aa6.57□□□□□ -1.36
UBR4-211ENST00000467272 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.57□□□□□ -1.36
UBR4-211ENST00000467272 NCR3O14931 201 aa6.57□□□□□ -1.36
UBR4-211ENST00000467272 FA2HQ7L5A8 372 aa6.57□□□□□ -1.36
UBR4-211ENST00000467272 ARL17AQ8IVW1 177 aa6.57□□□□□ -1.36
UBR4-211ENST00000467272 A0A0U1RRA0 63 aa6.56□□□□□ -1.36
UBR4-211ENST00000467272 TMEM223A0PJW6 202 aa6.56□□□□□ -1.36
UBR4-211ENST00000467272 A6NJY4 79 aa6.56□□□□□ -1.36
UBR4-211ENST00000467272 KRTAP9-7A8MTY7 169 aa6.56□□□□□ -1.36
UBR4-211ENST00000467272 SMIM13P0DJ93 91 aa6.56□□□□□ -1.36
UBR4-211ENST00000467272 NDUFA6P56556 154 aa6.55□□□□□ -1.36
UBR4-211ENST00000467272 TMEM170BQ5T4T1 132 aa6.55□□□□□ -1.36
UBR4-211ENST00000467272 Q6ZRX8 168 aa6.55□□□□□ -1.36
UBR4-211ENST00000467272 MIR7-3HGQ8N6C7 128 aa6.55□□□□□ -1.36
UBR4-211ENST00000467272 BAGE3Q86Y29 109 aa6.54□□□□□ -1.36
UBR4-211ENST00000467272 SMCO4Q9NRQ5 59 aa6.54□□□□□ -1.36
UBR4-211ENST00000467272 FCGBPQ9Y6R7 5405 aaPredicted RBP6.54□□□□□ -1.36
UBR4-211ENST00000467272 HBDP02042 147 aa6.53□□□□□ -1.36
UBR4-211ENST00000467272 TRBV10-2A0A0K0K1G8 114 aa6.52□□□□□ -1.37
UBR4-211ENST00000467272 LINC00614P0C842 121 aa6.52□□□□□ -1.37
UBR4-211ENST00000467272 COX19Q49B96 90 aa6.52□□□□□ -1.37
UBR4-211ENST00000467272 C18orf32Q8TCD1 76 aa6.52□□□□□ -1.37
UBR4-211ENST00000467272 IGLV6-57P01721 117 aa6.51□□□□□ -1.37
UBR4-211ENST00000467272 FABP9Q0Z7S8 132 aa6.51□□□□□ -1.37
UBR4-211ENST00000467272 PMCHL1Q16048 86 aa6.51□□□□□ -1.37
UBR4-211ENST00000467272 TRAV12-1A0A0B4J245 112 aa6.5□□□□□ -1.37
UBR4-211ENST00000467272 DDTP30046 118 aa6.5□□□□□ -1.37
UBR4-211ENST00000467272 HERV-K104P63124 156 aa6.5□□□□□ -1.37
UBR4-211ENST00000467272 CHTOPQ9Y3Y2 248 aaKnown RBP6.5□□□□□ -1.37
UBR4-211ENST00000467272 C5orf52A6NGY3 159 aa6.49□□□□□ -1.37
UBR4-211ENST00000467272 SPRR1BP22528 89 aa6.49□□□□□ -1.37
UBR4-211ENST00000467272 TMEM218A2RU14 115 aa6.48□□□□□ -1.37
UBR4-211ENST00000467272 C9orf92A6NGG3 77 aa6.48□□□□□ -1.37
UBR4-211ENST00000467272 ST20-AS1Q8NBB2 130 aa6.48□□□□□ -1.37
UBR4-211ENST00000467272 LINC00587B1AMM8 73 aa6.47□□□□□ -1.37
UBR4-211ENST00000467272 M0R2T5 61 aa6.47□□□□□ -1.37
UBR4-211ENST00000467272 MEIG1Q5JSS6 88 aa6.47□□□□□ -1.37
UBR4-211ENST00000467272 C9orf153Q5TBE3 101 aa6.47□□□□□ -1.37
UBR4-211ENST00000467272 SEC11CQ9BY50 192 aa6.47□□□□□ -1.37
UBR4-211ENST00000467272 ATP6V1G1O75348 118 aa6.46□□□□□ -1.38
UBR4-211ENST00000467272 S100PP25815 95 aa6.46□□□□□ -1.38
UBR4-211ENST00000467272 TSPEAR-AS2P59090 65 aa6.46□□□□□ -1.38
UBR4-211ENST00000467272 SPANXB1Q9NS25 103 aaPredicted RBP6.46□□□□□ -1.38
UBR4-211ENST00000467272 NDUFC2O95298 119 aa6.45□□□□□ -1.38
UBR4-211ENST00000467272 S100A12P80511 92 aa6.45□□□□□ -1.38
UBR4-211ENST00000467272 CLLU1Q5K131 121 aa6.45□□□□□ -1.38
UBR4-211ENST00000467272 UQCC3Q6UW78 93 aa6.45□□□□□ -1.38
UBR4-211ENST00000467272 LIMD2Q9BT23 127 aa6.45□□□□□ -1.38
UBR4-211ENST00000467272 RPL37P61927 97 aaKnown RBP6.44□□□□□ -1.38
UBR4-211ENST00000467272 JOSD1Q15040 202 aaPredicted RBP6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms