RNA–Protein interactions for RNA: ENST00000466624.1

GPC1-207, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-207ENST00000466624 SERTAD4-AS1Q5TG53 156 aa10.03□□□□□ -0.8
GPC1-207ENST00000466624 ARL17AQ8IVW1 177 aa10.03□□□□□ -0.8
GPC1-207ENST00000466624 TP73-AS1Q9UF72 201 aa10.03□□□□□ -0.8
GPC1-207ENST00000466624 LINC00528Q8N1L1 170 aa10.02□□□□□ -0.81
GPC1-207ENST00000466624 C7orf33Q8WU49 177 aa10.02□□□□□ -0.81
GPC1-207ENST00000466624 LITAFQ99732 161 aa10.02□□□□□ -0.81
GPC1-207ENST00000466624 VAMP8Q9BV40 100 aa10.02□□□□□ -0.81
GPC1-207ENST00000466624 M0QXV9 152 aa10.01□□□□□ -0.81
GPC1-207ENST00000466624 RPL24P83731 157 aaKnown RBP10.01□□□□□ -0.81
GPC1-207ENST00000466624 SCGB1D4Q6XE38 83 aa10.01□□□□□ -0.81
GPC1-207ENST00000466624 TMEM238C9JI98 176 aa10□□□□□ -0.81
GPC1-207ENST00000466624 FAM229AH3BQW9 127 aa10□□□□□ -0.81
GPC1-207ENST00000466624 VPREB1P12018 145 aa10□□□□□ -0.81
GPC1-207ENST00000466624 SPATA45Q537H7 98 aa10□□□□□ -0.81
GPC1-207ENST00000466624 ADAMTSL4-AS1Q5T5F5 129 aa10□□□□□ -0.81
GPC1-207ENST00000466624 DAND5Q8N907 189 aa10□□□□□ -0.81
GPC1-207ENST00000466624 C22orf24Q9Y442 160 aa10□□□□□ -0.81
GPC1-207ENST00000466624 COX8AP10176 69 aa9.99□□□□□ -0.81
GPC1-207ENST00000466624 PHF5AQ7RTV0 110 aaKnown RBP9.99□□□□□ -0.81
GPC1-207ENST00000466624 BOD1L2Q8IYS8 172 aa9.99□□□□□ -0.81
GPC1-207ENST00000466624 PAM16Q9Y3D7 125 aa9.99□□□□□ -0.81
GPC1-207ENST00000466624 DLEU1O43261 78 aa9.98□□□□□ -0.81
GPC1-207ENST00000466624 LBHQ53QV2 105 aaPredicted RBP9.98□□□□□ -0.81
GPC1-207ENST00000466624 NKAPP1Q8N9T2 125 aa9.98□□□□□ -0.81
GPC1-207ENST00000466624 MIEN1Q9BRT3 115 aa9.98□□□□□ -0.81
GPC1-207ENST00000466624 SPANXDQ9BXN6 97 aa9.98□□□□□ -0.81
GPC1-207ENST00000466624 SPANXCQ9NY87 97 aa9.98□□□□□ -0.81
GPC1-207ENST00000466624 Q5VSD8 79 aa9.97□□□□□ -0.81
GPC1-207ENST00000466624 Q6ZVH6 145 aa9.97□□□□□ -0.81
GPC1-207ENST00000466624 MRPL55Q7Z7F7 128 aaKnown RBP9.97□□□□□ -0.81
GPC1-207ENST00000466624 KRTAP17-1Q9BYP8 105 aa9.97□□□□□ -0.81
GPC1-207ENST00000466624 PLA2G1BP04054 148 aaKnown RBP9.96□□□□□ -0.82
GPC1-207ENST00000466624 Q8NDZ9 215 aa9.96□□□□□ -0.82
GPC1-207ENST00000466624 PPDPFQ9H3Y8 114 aa9.96□□□□□ -0.82
GPC1-207ENST00000466624 NDUFC2O95298 119 aa9.95□□□□□ -0.82
GPC1-207ENST00000466624 RPL37AP61513 92 aaKnown RBP9.95□□□□□ -0.82
GPC1-207ENST00000466624 LINC00308Q8TCZ7 52 aa9.95□□□□□ -0.82
GPC1-207ENST00000466624 VPS13BQ7Z7G8 4022 aa9.95□□□□□ -0.82
GPC1-207ENST00000466624 UBE2BP63146 152 aa9.94□□□□□ -0.82
GPC1-207ENST00000466624 SOSTDC1Q6X4U4 206 aa9.94□□□□□ -0.82
GPC1-207ENST00000466624 COPS9Q8WXC6 57 aa9.94□□□□□ -0.82
GPC1-207ENST00000466624 SPANXB1Q9NS25 103 aaPredicted RBP9.94□□□□□ -0.82
GPC1-207ENST00000466624 IFITM1P13164 125 aa9.93□□□□□ -0.82
GPC1-207ENST00000466624 KRTAP10-4P60372 401 aaPredicted RBP9.93□□□□□ -0.82
GPC1-207ENST00000466624 C14orf144Q96I85 54 aa9.93□□□□□ -0.82
GPC1-207ENST00000466624 LINC00167Q96N53 147 aa9.93□□□□□ -0.82
GPC1-207ENST00000466624 TRBV10-2A0A0K0K1G8 114 aa9.92□□□□□ -0.82
GPC1-207ENST00000466624 LOC105371267A0A1B0GV96 52 aa9.92□□□□□ -0.82
GPC1-207ENST00000466624 M0R378 163 aa9.92□□□□□ -0.82
GPC1-207ENST00000466624 NPC2P61916 151 aa9.92□□□□□ -0.82
GPC1-207ENST00000466624 PRR3P79522 188 aaKnown RBP9.92□□□□□ -0.82
GPC1-207ENST00000466624 S100A12P80511 92 aa9.92□□□□□ -0.82
GPC1-207ENST00000466624 SLC25A34Q6PIV7 304 aa9.92□□□□□ -0.82
GPC1-207ENST00000466624 EIF4EBP3O60516 100 aaPredicted RBP9.91□□□□□ -0.82
GPC1-207ENST00000466624 SMIM6P0DI80 62 aa9.91□□□□□ -0.82
GPC1-207ENST00000466624 KRTAP11-1Q8IUC1 163 aa9.9□□□□□ -0.82
GPC1-207ENST00000466624 HIGD1BQ9P298 99 aa9.9□□□□□ -0.82
GPC1-207ENST00000466624 PSORS1C2Q9UIG4 136 aa9.9□□□□□ -0.82
GPC1-207ENST00000466624 IGLV1-50A0A075B6I6 118 aa9.89□□□□□ -0.83
GPC1-207ENST00000466624 GAGE10A6NGK3 116 aa9.89□□□□□ -0.83
GPC1-207ENST00000466624 NCR3O14931 201 aa9.88□□□□□ -0.83
GPC1-207ENST00000466624 SRSF9Q13242 221 aaKnown RBP eCLIP9.88□□□□□ -0.83
GPC1-207ENST00000466624 RPL37AP8A6NKH3 93 aa9.87□□□□□ -0.83
GPC1-207ENST00000466624 MUSTN1Q8IVN3 82 aa9.87□□□□□ -0.83
GPC1-207ENST00000466624 LINC00518Q8N0U6 118 aa9.86□□□□□ -0.83
GPC1-207ENST00000466624 IGKV2-28A0A075B6P5 120 aa9.85□□□□□ -0.83
GPC1-207ENST00000466624 IGKV2D-28P01615 120 aa9.85□□□□□ -0.83
GPC1-207ENST00000466624 C1orf137Q5JT78 98 aa9.85□□□□□ -0.83
GPC1-207ENST00000466624 C2orf91Q6ZV80 131 aa9.85□□□□□ -0.83
GPC1-207ENST00000466624 KRTAP4-5Q9BYR2 181 aa9.85□□□□□ -0.83
GPC1-207ENST00000466624 SRRM2Q9UQ35 2752 aaKnown RBP9.84□□□□□ -0.83
GPC1-207ENST00000466624 TRBV10-3A0A0K0K1G6 114 aa9.83□□□□□ -0.84
GPC1-207ENST00000466624 PRYO14603 147 aa9.83□□□□□ -0.84
GPC1-207ENST00000466624 IGLV6-57P01721 117 aa9.83□□□□□ -0.84
GPC1-207ENST00000466624 DDTP30046 118 aa9.83□□□□□ -0.84
GPC1-207ENST00000466624 HIST1H4GQ99525 98 aa9.83□□□□□ -0.84
GPC1-207ENST00000466624 KCNQ1DNQ9H478 68 aa9.83□□□□□ -0.84
GPC1-207ENST00000466624 UQCR10Q9UDW1 63 aa9.83□□□□□ -0.84
GPC1-207ENST00000466624 PKHD1L1Q86WI1 4243 aa9.83□□□□□ -0.84
GPC1-207ENST00000466624 ABCA13Q86UQ4 5058 aa9.82□□□□□ -0.84
GPC1-207ENST00000466624 BCE1O60756 84 aa9.82□□□□□ -0.84
GPC1-207ENST00000466624 IGLV7-43P04211 117 aa9.82□□□□□ -0.84
GPC1-207ENST00000466624 TAL2Q16559 108 aa9.82□□□□□ -0.84
GPC1-207ENST00000466624 S100A7L2Q5SY68 101 aa9.82□□□□□ -0.84
GPC1-207ENST00000466624 REG3GQ6UW15 175 aa9.82□□□□□ -0.84
GPC1-207ENST00000466624 TMEM126AQ9H061 195 aa9.82□□□□□ -0.84
GPC1-207ENST00000466624 CBY1Q9Y3M2 126 aa9.81□□□□□ -0.84
GPC1-207ENST00000466624 SPRR1AP35321 89 aa9.79□□□□□ -0.84
GPC1-207ENST00000466624 HNRNPA3P51991 378 aaKnown RBP9.79□□□□□ -0.84
GPC1-207ENST00000466624 SPINK6Q6UWN8 80 aa9.79□□□□□ -0.84
GPC1-207ENST00000466624 LINC00337Q8N6G1 96 aa9.79□□□□□ -0.84
GPC1-207ENST00000466624 A4D1N5 150 aa9.78□□□□□ -0.84
GPC1-207ENST00000466624 INAFM2P0DMQ5 153 aa9.78□□□□□ -0.84
GPC1-207ENST00000466624 TRAV13-2A0A0B4J235 113 aa9.77□□□□□ -0.85
GPC1-207ENST00000466624 ZNF861PO60384 105 aa9.77□□□□□ -0.85
GPC1-207ENST00000466624 OR13C6PQ8NH95 151 aa9.77□□□□□ -0.85
GPC1-207ENST00000466624 TRAV23DV6A0A075B6W5 121 aa9.76□□□□□ -0.85
GPC1-207ENST00000466624 RPL28P46779 137 aaKnown RBP9.76□□□□□ -0.85
GPC1-207ENST00000466624 KRTAP13-1Q8IUC0 172 aa9.76□□□□□ -0.85
GPC1-207ENST00000466624 C12orf57Q99622 126 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms