RNA–Protein interactions for RNA: ENST00000464750.5

U2AF1-206, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-206ENST00000464750 CRYGAP11844 174 aa15.29■□□□□ 0.04
U2AF1-206ENST00000464750 HSBP1O75506 76 aa15.28■□□□□ 0.04
U2AF1-206ENST00000464750 TMEM238C9JI98 176 aa15.27■□□□□ 0.04
U2AF1-206ENST00000464750 LINC00158P58513 81 aa15.27■□□□□ 0.04
U2AF1-206ENST00000464750 PRLHP81277 87 aa15.27■□□□□ 0.04
U2AF1-206ENST00000464750 TMEM126AQ9H061 195 aa15.27■□□□□ 0.04
U2AF1-206ENST00000464750 FAM19A2Q8N3H0 131 aa15.26■□□□□ 0.03
U2AF1-206ENST00000464750 TYMSOSQ8TAI1 123 aa15.26■□□□□ 0.03
U2AF1-206ENST00000464750 ANAPC11Q9NYG5 84 aa15.26■□□□□ 0.03
U2AF1-206ENST00000464750 A0A0U1RRA0 63 aa15.25■□□□□ 0.03
U2AF1-206ENST00000464750 FAM19A1Q7Z5A9 133 aa15.25■□□□□ 0.03
U2AF1-206ENST00000464750 PRR4Q16378 134 aa15.24■□□□□ 0.03
U2AF1-206ENST00000464750 M0R378 163 aa15.22■□□□□ 0.03
U2AF1-206ENST00000464750 TSPAN13O95857 204 aa15.22■□□□□ 0.03
U2AF1-206ENST00000464750 TRGC2P03986 189 aa15.22■□□□□ 0.03
U2AF1-206ENST00000464750 H0Y8G0 127 aa15.2■□□□□ 0.02
U2AF1-206ENST00000464750 SMIM13P0DJ93 91 aa15.19■□□□□ 0.02
U2AF1-206ENST00000464750 FAM229BQ4G0N7 80 aa15.19■□□□□ 0.02
U2AF1-206ENST00000464750 KRTAP13-2Q52LG2 175 aa15.19■□□□□ 0.02
U2AF1-206ENST00000464750 MEIG1Q5JSS6 88 aa15.19■□□□□ 0.02
U2AF1-206ENST00000464750 ATP6V1G1O75348 118 aa15.17■□□□□ 0.02
U2AF1-206ENST00000464750 SERF1AO75920 110 aa15.17■□□□□ 0.02
U2AF1-206ENST00000464750 LINC00310P59036 64 aa15.17■□□□□ 0.02
U2AF1-206ENST00000464750 LEPROTL1O95214 131 aa15.16■□□□□ 0.02
U2AF1-206ENST00000464750 HERV-K104P63124 156 aa15.16■□□□□ 0.02
U2AF1-206ENST00000464750 NDUFA12Q9UI09 145 aa15.15■□□□□ 0.02
U2AF1-206ENST00000464750 MIR7-3HGQ8N6C7 128 aa15.14■□□□□ 0.01
U2AF1-206ENST00000464750 BOD1L2Q8IYS8 172 aa15.13■□□□□ 0.01
U2AF1-206ENST00000464750 MYMXA0A1B0GTQ4 84 aa15.11■□□□□ 0.01
U2AF1-206ENST00000464750 SLC7A5P1Q8MH63 180 aa15.11■□□□□ 0.01
U2AF1-206ENST00000464750 HIGD2AQ9BW72 106 aa15.11■□□□□ 0.01
U2AF1-206ENST00000464750 IGKV2D-26A0A0A0MRZ7 120 aa15.1■□□□□ 0.01
U2AF1-206ENST00000464750 NCR3O14931 201 aa15.1■□□□□ 0.01
U2AF1-206ENST00000464750 TSPEAR-AS2P59090 65 aa15.1■□□□□ 0.01
U2AF1-206ENST00000464750 PLEKHB2Q96CS7 222 aa15.1■□□□□ 0.01
U2AF1-206ENST00000464750 LINC00587B1AMM8 73 aa15.09■□□□□ 0.01
U2AF1-206ENST00000464750 LINC00304Q8N9R0 145 aa15.09■□□□□ 0.01
U2AF1-206ENST00000464750 HSPB8Q9UJY1 196 aa15.09■□□□□ 0.01
U2AF1-206ENST00000464750 PLNP26678 52 aa15.08■□□□□ 0
U2AF1-206ENST00000464750 PRYO14603 147 aa15.07■□□□□ 0
U2AF1-206ENST00000464750 LEPROTO15243 131 aa15.07■□□□□ 0
U2AF1-206ENST00000464750 FABP4P15090 132 aa15.07■□□□□ 0
U2AF1-206ENST00000464750 MAP1LC3CQ9BXW4 147 aa15.07■□□□□ 0
U2AF1-206ENST00000464750 COLCA2A8K830 154 aa15.05■□□□□ -0
U2AF1-206ENST00000464750 DPM2O94777 84 aa15.04■□□□□ -0
U2AF1-206ENST00000464750 PMCHL2Q9BQD1 86 aa15.04■□□□□ -0
U2AF1-206ENST00000464750 HERVK_113P61574 105 aa15.03■□□□□ -0
U2AF1-206ENST00000464750 KCNQ1DNQ9H478 68 aa15.02■□□□□ -0
U2AF1-206ENST00000464750 J3QQQ9 107 aa15.01□□□□□ -0.01
U2AF1-206ENST00000464750 SPRR1AP35321 89 aa15.01□□□□□ -0.01
U2AF1-206ENST00000464750 C3orf22Q8N5N4 141 aa15.01□□□□□ -0.01
U2AF1-206ENST00000464750 LINC00337Q8N6G1 96 aa15.01□□□□□ -0.01
U2AF1-206ENST00000464750 DAND5Q8N907 189 aa15.01□□□□□ -0.01
U2AF1-206ENST00000464750 SPRR4Q96PI1 79 aa15.01□□□□□ -0.01
U2AF1-206ENST00000464750 TRBV10-3A0A0K0K1G6 114 aa15□□□□□ -0.01
U2AF1-206ENST00000464750 IGKCP01834 107 aa15□□□□□ -0.01
U2AF1-206ENST00000464750 RETNLBQ9BQ08 111 aa15□□□□□ -0.01
U2AF1-206ENST00000464750 ZNF706Q9Y5V0 76 aaPredicted RBP14.99□□□□□ -0.01
U2AF1-206ENST00000464750 ETDCA0A1B0GVM5 59 aa14.98□□□□□ -0.01
U2AF1-206ENST00000464750 LGALS3P17931 250 aaKnown RBP14.98□□□□□ -0.01
U2AF1-206ENST00000464750 NMUP48645 174 aa14.97□□□□□ -0.01
U2AF1-206ENST00000464750 LOC107984156A0A0G2JMH3 177 aa14.96□□□□□ -0.01
U2AF1-206ENST00000464750 KRTAP4-16G5E9R7 235 aaPredicted RBP14.96□□□□□ -0.01
U2AF1-206ENST00000464750 ARL17AQ8IVW1 177 aa14.96□□□□□ -0.01
U2AF1-206ENST00000464750 S100A12P80511 92 aa14.94□□□□□ -0.02
U2AF1-206ENST00000464750 C4orf48Q5BLP8 95 aa14.93□□□□□ -0.02
U2AF1-206ENST00000464750 SMCR5Q8TEV8 140 aa14.93□□□□□ -0.02
U2AF1-206ENST00000464750 MIEN1Q9BRT3 115 aa14.93□□□□□ -0.02
U2AF1-206ENST00000464750 CTAG1AP78358 180 aa14.92□□□□□ -0.02
U2AF1-206ENST00000464750 TRBV10-2A0A0K0K1G8 114 aa14.91□□□□□ -0.02
U2AF1-206ENST00000464750 DDTP30046 118 aa14.91□□□□□ -0.02
U2AF1-206ENST00000464750 SPANXB1Q9NS25 103 aaPredicted RBP14.9□□□□□ -0.02
U2AF1-206ENST00000464750 MUC2Q02817 5179 aa14.89□□□□□ -0.03
U2AF1-206ENST00000464750 B5MCH6 92 aa14.88□□□□□ -0.03
U2AF1-206ENST00000464750 PPDPFQ9H3Y8 114 aa14.88□□□□□ -0.03
U2AF1-206ENST00000464750 E9PLD3 99 aa14.87□□□□□ -0.03
U2AF1-206ENST00000464750 HIST1H2BKO60814 126 aa14.86□□□□□ -0.03
U2AF1-206ENST00000464750 HIST1H2BJP06899 126 aa14.86□□□□□ -0.03
U2AF1-206ENST00000464750 HIST1H2BOP23527 126 aa14.86□□□□□ -0.03
U2AF1-206ENST00000464750 HIST1H2BBP33778 126 aa14.86□□□□□ -0.03
U2AF1-206ENST00000464750 HIST1H2BDP58876 126 aa14.86□□□□□ -0.03
U2AF1-206ENST00000464750 HIST1H2BCP62807 126 aa14.86□□□□□ -0.03
U2AF1-206ENST00000464750 HIST2H2BEQ16778 126 aa14.86□□□□□ -0.03
U2AF1-206ENST00000464750 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.86□□□□□ -0.03
U2AF1-206ENST00000464750 SPAG11AQ6PDA7 123 aa14.86□□□□□ -0.03
U2AF1-206ENST00000464750 HIST1H2BHQ93079 126 aa14.86□□□□□ -0.03
U2AF1-206ENST00000464750 HIST1H2BNQ99877 126 aa14.86□□□□□ -0.03
U2AF1-206ENST00000464750 HIST1H2BMQ99879 126 aa14.86□□□□□ -0.03
U2AF1-206ENST00000464750 A0A0J9YXY3 114 aa14.85□□□□□ -0.03
U2AF1-206ENST00000464750 SYS1-DBNDD2H3BUS1 97 aa14.85□□□□□ -0.03
U2AF1-206ENST00000464750 NDUFC2O95298 119 aa14.85□□□□□ -0.03
U2AF1-206ENST00000464750 NPC2P61916 151 aa14.84□□□□□ -0.03
U2AF1-206ENST00000464750 S100A7L2Q5SY68 101 aa14.84□□□□□ -0.03
U2AF1-206ENST00000464750 SOSTDC1Q6X4U4 206 aa14.84□□□□□ -0.03
U2AF1-206ENST00000464750 IGLV7-46A0A075B6I9 117 aa14.83□□□□□ -0.04
U2AF1-206ENST00000464750 LINC00483Q53H64 154 aa14.83□□□□□ -0.04
U2AF1-206ENST00000464750 IGLV6-57P01721 117 aa14.82□□□□□ -0.04
U2AF1-206ENST00000464750 ADAMTSL4-AS1Q5T5F5 129 aa14.82□□□□□ -0.04
U2AF1-206ENST00000464750 Q8NBF4 154 aa14.82□□□□□ -0.04
U2AF1-206ENST00000464750 EIF4EBP3O60516 100 aaPredicted RBP14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms