RNA–Protein interactions for RNA: ENST00000462730.5

HDAC6-213, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-213ENST00000462730 MEGF8Q7Z7M0 2845 aa9.77□□□□□ -0.85
HDAC6-213ENST00000462730 PFN2P35080 140 aa9.76□□□□□ -0.85
HDAC6-213ENST00000462730 INAFM2P0DMQ5 153 aa9.75□□□□□ -0.85
HDAC6-213ENST00000462730 RPS28P62857 69 aaKnown RBP9.75□□□□□ -0.85
HDAC6-213ENST00000462730 SDIM1Q6ZPB5 146 aa9.75□□□□□ -0.85
HDAC6-213ENST00000462730 J3KT08 172 aa9.74□□□□□ -0.85
HDAC6-213ENST00000462730 SPAG11BQ08648 103 aa9.74□□□□□ -0.85
HDAC6-213ENST00000462730 LINC01556Q5JQF7 62 aa9.74□□□□□ -0.85
HDAC6-213ENST00000462730 KLK5Q9Y337 293 aaPredicted RBP9.74□□□□□ -0.85
HDAC6-213ENST00000462730 OR13C6PQ8NH95 151 aa9.73□□□□□ -0.85
HDAC6-213ENST00000462730 UQCRQO14949 82 aa9.72□□□□□ -0.85
HDAC6-213ENST00000462730 CCL18P55774 89 aa9.71□□□□□ -0.86
HDAC6-213ENST00000462730 C6orf223Q8N319 242 aa9.71□□□□□ -0.86
HDAC6-213ENST00000462730 SND1-IT1Q9HBX3 110 aa9.71□□□□□ -0.86
HDAC6-213ENST00000462730 LINC00588Q9Y4M8 146 aa9.71□□□□□ -0.86
HDAC6-213ENST00000462730 C3orf22Q8N5N4 141 aa9.7□□□□□ -0.86
HDAC6-213ENST00000462730 LYSTQ99698 3801 aa9.7□□□□□ -0.86
HDAC6-213ENST00000462730 CSMD3Q7Z407 3707 aa9.7□□□□□ -0.86
HDAC6-213ENST00000462730 DNAH10OSP0CZ25 163 aa9.7□□□□□ -0.86
HDAC6-213ENST00000462730 KRTAP26-1Q6PEX3 210 aa9.7□□□□□ -0.86
HDAC6-213ENST00000462730 LINC00526Q96FQ7 95 aa9.7□□□□□ -0.86
HDAC6-213ENST00000462730 C9orf116Q5BN46 136 aaPredicted RBP9.68□□□□□ -0.86
HDAC6-213ENST00000462730 FAM218AQ96MZ4 157 aa9.68□□□□□ -0.86
HDAC6-213ENST00000462730 C1orf43Q9BWL3 253 aa9.68□□□□□ -0.86
HDAC6-213ENST00000462730 DYNC2H1Q8NCM8 4307 aaKnown RBP9.68□□□□□ -0.86
HDAC6-213ENST00000462730 FAM236AA0A1B0GUQ0 79 aa9.68□□□□□ -0.86
HDAC6-213ENST00000462730 FAM236BA0A1B0GV22 79 aa9.68□□□□□ -0.86
HDAC6-213ENST00000462730 C10orf25Q5T742 122 aa9.68□□□□□ -0.86
HDAC6-213ENST00000462730 UNQ6190/PRO20217Q6UXQ8 127 aa9.68□□□□□ -0.86
HDAC6-213ENST00000462730 FAM19A5Q7Z5A7 132 aaPredicted RBP9.68□□□□□ -0.86
HDAC6-213ENST00000462730 TRAV13-2A0A0B4J235 113 aa9.67□□□□□ -0.86
HDAC6-213ENST00000462730 BAALC-AS2P0C853 105 aa9.67□□□□□ -0.86
HDAC6-213ENST00000462730 COX17Q14061 63 aa9.67□□□□□ -0.86
HDAC6-213ENST00000462730 IGKV2-28A0A075B6P5 120 aa9.66□□□□□ -0.86
HDAC6-213ENST00000462730 IGKV2D-24A0A075B6R9 120 aa9.66□□□□□ -0.86
HDAC6-213ENST00000462730 IGKV2D-28P01615 120 aa9.66□□□□□ -0.86
HDAC6-213ENST00000462730 C22orf24Q9Y442 160 aa9.66□□□□□ -0.86
HDAC6-213ENST00000462730 ATOX1O00244 68 aa9.66□□□□□ -0.86
HDAC6-213ENST00000462730 RPL28P46779 137 aaKnown RBP9.66□□□□□ -0.86
HDAC6-213ENST00000462730 C9orf153Q5TBE3 101 aa9.66□□□□□ -0.86
HDAC6-213ENST00000462730 Q9HAA7 133 aa9.66□□□□□ -0.86
HDAC6-213ENST00000462730 HIGD2BQ4VC39 106 aa9.65□□□□□ -0.86
HDAC6-213ENST00000462730 LINC00337Q8N6G1 96 aa9.65□□□□□ -0.86
HDAC6-213ENST00000462730 SMCR5Q8TEV8 140 aa9.65□□□□□ -0.86
HDAC6-213ENST00000462730 DNAH7Q8WXX0 4024 aa9.65□□□□□ -0.86
HDAC6-213ENST00000462730 UPK3BQ9BT76 320 aa9.64□□□□□ -0.87
HDAC6-213ENST00000462730 APLNQ9ULZ1 77 aa9.64□□□□□ -0.87
HDAC6-213ENST00000462730 PLECQ15149 4684 aaKnown RBP9.64□□□□□ -0.87
HDAC6-213ENST00000462730 ZNF561-AS1K7EIQ3 104 aa9.63□□□□□ -0.87
HDAC6-213ENST00000462730 C15orf56Q8N910 161 aa9.63□□□□□ -0.87
HDAC6-213ENST00000462730 NUPR2A6NF83 97 aa9.63□□□□□ -0.87
HDAC6-213ENST00000462730 COX7CP15954 63 aa9.63□□□□□ -0.87
HDAC6-213ENST00000462730 STARD9Q9P2P6 4700 aa9.62□□□□□ -0.87
HDAC6-213ENST00000462730 GVQW2A0A096LPI5 108 aaPredicted RBP9.62□□□□□ -0.87
HDAC6-213ENST00000462730 CRYGAP11844 174 aa9.62□□□□□ -0.87
HDAC6-213ENST00000462730 HIST1H4AP62805 103 aaKnown RBP9.62□□□□□ -0.87
HDAC6-213ENST00000462730 DNAH1Q9P2D7 4330 aa9.61□□□□□ -0.87
HDAC6-213ENST00000462730 LOC107984640A0A0U1RRK4 108 aa9.61□□□□□ -0.87
HDAC6-213ENST00000462730 H0YGX0 51 aa9.61□□□□□ -0.87
HDAC6-213ENST00000462730 C6orf48Q9UBA6 75 aa9.61□□□□□ -0.87
HDAC6-213ENST00000462730 CAMK2N2Q96S95 79 aa9.61□□□□□ -0.87
HDAC6-213ENST00000462730 F8WDY8 70 aa9.6□□□□□ -0.87
HDAC6-213ENST00000462730 SMIM11BQ8TCY0 68 aa9.6□□□□□ -0.87
HDAC6-213ENST00000462730 MUC7Q8TAX7 377 aa9.59□□□□□ -0.87
HDAC6-213ENST00000462730 FBN3Q75N90 2809 aa9.59□□□□□ -0.87
HDAC6-213ENST00000462730 A0A087WYN8 130 aa9.59□□□□□ -0.87
HDAC6-213ENST00000462730 DNAL4O96015 105 aa9.59□□□□□ -0.87
HDAC6-213ENST00000462730 Q6JHZ5 121 aa9.59□□□□□ -0.87
HDAC6-213ENST00000462730 UBE2DNLQ8IWF7 75 aa9.59□□□□□ -0.87
HDAC6-213ENST00000462730 NDUFC2O95298 119 aa9.58□□□□□ -0.88
HDAC6-213ENST00000462730 GAGE2AQ6NT46 116 aa9.58□□□□□ -0.88
HDAC6-213ENST00000462730 C2orf48Q96LS8 159 aa9.58□□□□□ -0.88
HDAC6-213ENST00000462730 PRR3P79522 188 aaKnown RBP9.57□□□□□ -0.88
HDAC6-213ENST00000462730 Q6ZRU5 148 aa9.57□□□□□ -0.88
HDAC6-213ENST00000462730 RMI2Q96E14 147 aa9.57□□□□□ -0.88
HDAC6-213ENST00000462730 Q8NDZ9 215 aa9.56□□□□□ -0.88
HDAC6-213ENST00000462730 OBSCN-AS1Q96MR7 158 aa9.56□□□□□ -0.88
HDAC6-213ENST00000462730 S100A7L2Q5SY68 101 aa9.55□□□□□ -0.88
HDAC6-213ENST00000462730 NCR3O14931 201 aa9.55□□□□□ -0.88
HDAC6-213ENST00000462730 CASC10Q5T4H9 136 aa9.55□□□□□ -0.88
HDAC6-213ENST00000462730 TMEM258P61165 79 aa9.54□□□□□ -0.88
HDAC6-213ENST00000462730 RPL18AQ02543 176 aaKnown RBP9.54□□□□□ -0.88
HDAC6-213ENST00000462730 ATP5EP2Q5VTU8 51 aa9.54□□□□□ -0.88
HDAC6-213ENST00000462730 C9orf129Q5T035 196 aaKnown RBP9.54□□□□□ -0.88
HDAC6-213ENST00000462730 SYCNQ0VAF6 134 aa9.53□□□□□ -0.88
HDAC6-213ENST00000462730 KRTAP1-5Q9BYS1 174 aa9.53□□□□□ -0.88
HDAC6-213ENST00000462730 XAGE1AQ9HD64 81 aa9.53□□□□□ -0.88
HDAC6-213ENST00000462730 USP17L23D6RBM5 183 aa9.52□□□□□ -0.89
HDAC6-213ENST00000462730 LECT2O14960 151 aa9.52□□□□□ -0.89
HDAC6-213ENST00000462730 C14orf132Q9NPU4 83 aa9.52□□□□□ -0.89
HDAC6-213ENST00000462730 SERP2Q8N6R1 65 aa9.5□□□□□ -0.89
HDAC6-213ENST00000462730 NDUFC2-KCTD14E9PQ53 114 aa9.5□□□□□ -0.89
HDAC6-213ENST00000462730 TENM2Q9NT68 2774 aa9.49□□□□□ -0.89
HDAC6-213ENST00000462730 DNAH10Q8IVF4 4471 aa9.49□□□□□ -0.89
HDAC6-213ENST00000462730 SLPIP03973 132 aa9.47□□□□□ -0.89
HDAC6-213ENST00000462730 DPH3Q96FX2 82 aa9.47□□□□□ -0.89
HDAC6-213ENST00000462730 JMJD7-PLA2G4BH0Y9G9 81 aa9.46□□□□□ -0.89
HDAC6-213ENST00000462730 Q6ZRP5 223 aa9.46□□□□□ -0.89
HDAC6-213ENST00000462730 ORMDL1Q9P0S3 153 aa9.46□□□□□ -0.89
HDAC6-213ENST00000462730 BCE1O60756 84 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms