RNA–Protein interactions for RNA: ENST00000461437.5

NUP50-213, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-213ENST00000461437 H0Y8G0 127 aa9.12□□□□□ -0.95
NUP50-213ENST00000461437 LINC00158P58513 81 aa9.12□□□□□ -0.95
NUP50-213ENST00000461437 FAM19A1Q7Z5A9 133 aa9.12□□□□□ -0.95
NUP50-213ENST00000461437 TYMSOSQ8TAI1 123 aa9.12□□□□□ -0.95
NUP50-213ENST00000461437 CHCHD1Q96BP2 118 aaKnown RBP9.12□□□□□ -0.95
NUP50-213ENST00000461437 TMEM126AQ9H061 195 aa9.12□□□□□ -0.95
NUP50-213ENST00000461437 CRYGAP11844 174 aa9.11□□□□□ -0.95
NUP50-213ENST00000461437 TRAV12-1A0A0B4J245 112 aa9.1□□□□□ -0.95
NUP50-213ENST00000461437 M0R378 163 aa9.1□□□□□ -0.95
NUP50-213ENST00000461437 COX17Q14061 63 aa9.1□□□□□ -0.95
NUP50-213ENST00000461437 TRGC2P03986 189 aa9.09□□□□□ -0.95
NUP50-213ENST00000461437 SMIM13P0DJ93 91 aa9.09□□□□□ -0.95
NUP50-213ENST00000461437 RPL24P83731 157 aaKnown RBP9.09□□□□□ -0.95
NUP50-213ENST00000461437 HSBP1O75506 76 aa9.08□□□□□ -0.96
NUP50-213ENST00000461437 LINC00310P59036 64 aa9.08□□□□□ -0.96
NUP50-213ENST00000461437 MEIG1Q5JSS6 88 aa9.06□□□□□ -0.96
NUP50-213ENST00000461437 SLC7A5P1Q8MH63 180 aa9.06□□□□□ -0.96
NUP50-213ENST00000461437 NCR3O14931 201 aa9.05□□□□□ -0.96
NUP50-213ENST00000461437 SERF1AO75920 110 aa9.05□□□□□ -0.96
NUP50-213ENST00000461437 TSPEAR-AS2P59090 65 aa9.05□□□□□ -0.96
NUP50-213ENST00000461437 MIR7-3HGQ8N6C7 128 aa9.05□□□□□ -0.96
NUP50-213ENST00000461437 RETNLBQ9BQ08 111 aa9.05□□□□□ -0.96
NUP50-213ENST00000461437 SFTA2Q6UW10 78 aa9.04□□□□□ -0.96
NUP50-213ENST00000461437 PMCHL2Q9BQD1 86 aa9.04□□□□□ -0.96
NUP50-213ENST00000461437 HIGD2AQ9BW72 106 aa9.04□□□□□ -0.96
NUP50-213ENST00000461437 BOD1L2Q8IYS8 172 aa9.03□□□□□ -0.96
NUP50-213ENST00000461437 C3orf22Q8N5N4 141 aa9.03□□□□□ -0.96
NUP50-213ENST00000461437 ATP6V1G1O75348 118 aa9.02□□□□□ -0.97
NUP50-213ENST00000461437 FABP4P15090 132 aa9.02□□□□□ -0.97
NUP50-213ENST00000461437 DAND5Q8N907 189 aa9.02□□□□□ -0.97
NUP50-213ENST00000461437 PLEKHB2Q96CS7 222 aa9.02□□□□□ -0.97
NUP50-213ENST00000461437 NDUFA12Q9UI09 145 aa9.02□□□□□ -0.97
NUP50-213ENST00000461437 LEPROTL1O95214 131 aa9.01□□□□□ -0.97
NUP50-213ENST00000461437 FAM229BQ4G0N7 80 aa9.01□□□□□ -0.97
NUP50-213ENST00000461437 LINC00304Q8N9R0 145 aa9.01□□□□□ -0.97
NUP50-213ENST00000461437 IGKV2D-26A0A0A0MRZ7 120 aa9□□□□□ -0.97
NUP50-213ENST00000461437 HERV-K104P63124 156 aa8.98□□□□□ -0.97
NUP50-213ENST00000461437 MUC2Q02817 5179 aa8.98□□□□□ -0.97
NUP50-213ENST00000461437 TRBV10-3A0A0K0K1G6 114 aa8.97□□□□□ -0.97
NUP50-213ENST00000461437 MYMXA0A1B0GTQ4 84 aa8.97□□□□□ -0.97
NUP50-213ENST00000461437 COLCA2A8K830 154 aa8.97□□□□□ -0.97
NUP50-213ENST00000461437 LEPROTO15243 131 aa8.97□□□□□ -0.97
NUP50-213ENST00000461437 SPRR4Q96PI1 79 aa8.97□□□□□ -0.97
NUP50-213ENST00000461437 PRYO14603 147 aa8.96□□□□□ -0.98
NUP50-213ENST00000461437 PPDPFQ9H3Y8 114 aa8.96□□□□□ -0.98
NUP50-213ENST00000461437 MUC17Q685J3 4493 aa8.94□□□□□ -0.98
NUP50-213ENST00000461437 J3QQQ9 107 aa8.94□□□□□ -0.98
NUP50-213ENST00000461437 DPM2O94777 84 aa8.94□□□□□ -0.98
NUP50-213ENST00000461437 SPRR1AP35321 89 aa8.94□□□□□ -0.98
NUP50-213ENST00000461437 SMCR5Q8TEV8 140 aa8.94□□□□□ -0.98
NUP50-213ENST00000461437 KRTAP4-16G5E9R7 235 aaPredicted RBP8.93□□□□□ -0.98
NUP50-213ENST00000461437 IGKCP01834 107 aa8.93□□□□□ -0.98
NUP50-213ENST00000461437 NPC2P61916 151 aa8.93□□□□□ -0.98
NUP50-213ENST00000461437 KCNQ1DNQ9H478 68 aa8.93□□□□□ -0.98
NUP50-213ENST00000461437 HSPB8Q9UJY1 196 aa8.93□□□□□ -0.98
NUP50-213ENST00000461437 ETDCA0A1B0GVM5 59 aa8.92□□□□□ -0.98
NUP50-213ENST00000461437 PLNP26678 52 aa8.92□□□□□ -0.98
NUP50-213ENST00000461437 MAP1LC3CQ9BXW4 147 aa8.92□□□□□ -0.98
NUP50-213ENST00000461437 EIF4EBP3O60516 100 aaPredicted RBP8.91□□□□□ -0.98
NUP50-213ENST00000461437 LGALS3P17931 250 aaKnown RBP8.91□□□□□ -0.98
NUP50-213ENST00000461437 LINC00337Q8N6G1 96 aa8.91□□□□□ -0.98
NUP50-213ENST00000461437 LINC00587B1AMM8 73 aa8.9□□□□□ -0.98
NUP50-213ENST00000461437 ERC2-IT1O76042 136 aa8.9□□□□□ -0.98
NUP50-213ENST00000461437 HERVK_113P61574 105 aa8.9□□□□□ -0.98
NUP50-213ENST00000461437 SOSTDC1Q6X4U4 206 aa8.9□□□□□ -0.98
NUP50-213ENST00000461437 KRTAP9-2Q9BYQ4 174 aa8.9□□□□□ -0.98
NUP50-213ENST00000461437 DDTP30046 118 aa8.89□□□□□ -0.99
NUP50-213ENST00000461437 B5MCH6 92 aa8.88□□□□□ -0.99
NUP50-213ENST00000461437 ADAMTSL4-AS1Q5T5F5 129 aa8.88□□□□□ -0.99
NUP50-213ENST00000461437 ZNF706Q9Y5V0 76 aaPredicted RBP8.88□□□□□ -0.99
NUP50-213ENST00000461437 IGLV7-46A0A075B6I9 117 aa8.87□□□□□ -0.99
NUP50-213ENST00000461437 LOC107984156A0A0G2JMH3 177 aa8.87□□□□□ -0.99
NUP50-213ENST00000461437 GAGE2AQ6NT46 116 aa8.87□□□□□ -0.99
NUP50-213ENST00000461437 ARL17AQ8IVW1 177 aa8.87□□□□□ -0.99
NUP50-213ENST00000461437 Q8NBF4 154 aa8.87□□□□□ -0.99
NUP50-213ENST00000461437 A0A0J9YXY3 114 aa8.86□□□□□ -0.99
NUP50-213ENST00000461437 HIST1H2BKO60814 126 aa8.86□□□□□ -0.99
NUP50-213ENST00000461437 HIST1H2BJP06899 126 aa8.86□□□□□ -0.99
NUP50-213ENST00000461437 HIST1H2BOP23527 126 aa8.86□□□□□ -0.99
NUP50-213ENST00000461437 HIST1H2BBP33778 126 aa8.86□□□□□ -0.99
NUP50-213ENST00000461437 NMUP48645 174 aa8.86□□□□□ -0.99
NUP50-213ENST00000461437 HIST1H2BDP58876 126 aa8.86□□□□□ -0.99
NUP50-213ENST00000461437 HIST1H2BCP62807 126 aa8.86□□□□□ -0.99
NUP50-213ENST00000461437 HIST2H2BEQ16778 126 aa8.86□□□□□ -0.99
NUP50-213ENST00000461437 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.86□□□□□ -0.99
NUP50-213ENST00000461437 HIST1H2BHQ93079 126 aa8.86□□□□□ -0.99
NUP50-213ENST00000461437 HIST1H2BNQ99877 126 aa8.86□□□□□ -0.99
NUP50-213ENST00000461437 HIST1H2BMQ99879 126 aa8.86□□□□□ -0.99
NUP50-213ENST00000461437 Q9BRP9 147 aa8.86□□□□□ -0.99
NUP50-213ENST00000461437 MIEN1Q9BRT3 115 aa8.86□□□□□ -0.99
NUP50-213ENST00000461437 E9PLD3 99 aa8.84□□□□□ -0.99
NUP50-213ENST00000461437 SPANXB1Q9NS25 103 aaPredicted RBP8.84□□□□□ -0.99
NUP50-213ENST00000461437 IGLV9-49A0A0B4J1Y8 123 aa8.83□□□□□ -1
NUP50-213ENST00000461437 TRBV10-2A0A0K0K1G8 114 aa8.83□□□□□ -1
NUP50-213ENST00000461437 SYS1-DBNDD2H3BUS1 97 aa8.83□□□□□ -1
NUP50-213ENST00000461437 S100A7L2Q5SY68 101 aa8.83□□□□□ -1
NUP50-213ENST00000461437 CDIP1Q9H305 208 aa8.83□□□□□ -1
NUP50-213ENST00000461437 IGLV6-57P01721 117 aa8.82□□□□□ -1
NUP50-213ENST00000461437 S100A12P80511 92 aa8.82□□□□□ -1
NUP50-213ENST00000461437 MOBPQ13875 183 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 102 ms