RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 IGHV4-30-4P0DP06 118 aa10.73□□□□□ -0.69
LMNB1-203ENST00000460265 A0A087WYN8 130 aa10.72□□□□□ -0.69
LMNB1-203ENST00000460265 LECT2O14960 151 aa10.72□□□□□ -0.69
LMNB1-203ENST00000460265 RETNQ9HD89 108 aa10.72□□□□□ -0.69
LMNB1-203ENST00000460265 SLPIP03973 132 aa10.72□□□□□ -0.69
LMNB1-203ENST00000460265 IGLV5-39A0A0G2JS06 123 aa10.71□□□□□ -0.69
LMNB1-203ENST00000460265 NDUFC2-KCTD14E9PQ53 114 aa10.71□□□□□ -0.69
LMNB1-203ENST00000460265 RPL28P46779 137 aaKnown RBP10.71□□□□□ -0.69
LMNB1-203ENST00000460265 CELA1Q9UNI1 258 aa10.71□□□□□ -0.69
LMNB1-203ENST00000460265 ENHOQ6UWT2 76 aa10.71□□□□□ -0.69
LMNB1-203ENST00000460265 BRK1Q8WUW1 75 aa10.71□□□□□ -0.7
LMNB1-203ENST00000460265 REG3AQ06141 175 aa10.7□□□□□ -0.7
LMNB1-203ENST00000460265 FAM19A1Q7Z5A9 133 aa10.7□□□□□ -0.7
LMNB1-203ENST00000460265 SERP1Q9Y6X1 66 aa10.7□□□□□ -0.7
LMNB1-203ENST00000460265 IGLV5-45A0A087WSX0 123 aa10.7□□□□□ -0.7
LMNB1-203ENST00000460265 F8WDY8 70 aa10.7□□□□□ -0.7
LMNB1-203ENST00000460265 PRB2P02812 416 aaPredicted RBP10.7□□□□□ -0.7
LMNB1-203ENST00000460265 CHCHD10Q8WYQ3 142 aaPredicted RBP10.7□□□□□ -0.7
LMNB1-203ENST00000460265 LYRM9A8MSI8 78 aa10.69□□□□□ -0.7
LMNB1-203ENST00000460265 S100A7L2Q5SY68 101 aa10.69□□□□□ -0.7
LMNB1-203ENST00000460265 KMT2BQ9UMN6 2715 aaPredicted RBP10.69□□□□□ -0.7
LMNB1-203ENST00000460265 PRR3P79522 188 aaKnown RBP10.69□□□□□ -0.7
LMNB1-203ENST00000460265 C9orf116Q5BN46 136 aaPredicted RBP10.69□□□□□ -0.7
LMNB1-203ENST00000460265 IGHV3OR16-9A0A0B4J2B5 98 aa10.68□□□□□ -0.7
LMNB1-203ENST00000460265 CCL18P55774 89 aa10.67□□□□□ -0.7
LMNB1-203ENST00000460265 RBM3P98179 157 aaKnown RBP10.67□□□□□ -0.7
LMNB1-203ENST00000460265 SMIM11BQ8TCY0 68 aa10.67□□□□□ -0.7
LMNB1-203ENST00000460265 V9GYY9 64 aa10.66□□□□□ -0.7
LMNB1-203ENST00000460265 H0YGX0 51 aa10.66□□□□□ -0.7
LMNB1-203ENST00000460265 SEC61GP60059 68 aa10.66□□□□□ -0.7
LMNB1-203ENST00000460265 LINC00337Q8N6G1 96 aa10.66□□□□□ -0.7
LMNB1-203ENST00000460265 SNURFQ9Y675 71 aa10.66□□□□□ -0.7
LMNB1-203ENST00000460265 A0A087WZ39 114 aa10.65□□□□□ -0.7
LMNB1-203ENST00000460265 FBN1P35555 2871 aaKnown RBP10.65□□□□□ -0.7
LMNB1-203ENST00000460265 SMIM26A0A096LP01 95 aa10.64□□□□□ -0.71
LMNB1-203ENST00000460265 TRRAPQ9Y4A5 3859 aa10.63□□□□□ -0.71
LMNB1-203ENST00000460265 C1orf195Q5TG92 126 aa10.63□□□□□ -0.71
LMNB1-203ENST00000460265 ORMDL1Q9P0S3 153 aa10.63□□□□□ -0.71
LMNB1-203ENST00000460265 MIFP14174 115 aa10.63□□□□□ -0.71
LMNB1-203ENST00000460265 UBL5Q9BZL1 73 aa10.63□□□□□ -0.71
LMNB1-203ENST00000460265 CCKP06307 115 aa10.62□□□□□ -0.71
LMNB1-203ENST00000460265 IBA57-AS1B1ANH7 110 aa10.61□□□□□ -0.71
LMNB1-203ENST00000460265 SPAG11BQ08648 103 aa10.61□□□□□ -0.71
LMNB1-203ENST00000460265 HIGD2BQ4VC39 106 aa10.61□□□□□ -0.71
LMNB1-203ENST00000460265 H7BZZ5 65 aa10.6□□□□□ -0.71
LMNB1-203ENST00000460265 C6orf223Q8N319 242 aa10.6□□□□□ -0.71
LMNB1-203ENST00000460265 ZNF561-AS1K7EIQ3 104 aa10.59□□□□□ -0.71
LMNB1-203ENST00000460265 XAGE1AQ9HD64 81 aa10.59□□□□□ -0.71
LMNB1-203ENST00000460265 F8WEM9 126 aa10.59□□□□□ -0.71
LMNB1-203ENST00000460265 CD164L2Q6UWJ8 174 aa10.59□□□□□ -0.71
LMNB1-203ENST00000460265 RMI2Q96E14 147 aa10.59□□□□□ -0.71
LMNB1-203ENST00000460265 AKAP9Q99996 3911 aa10.59□□□□□ -0.71
LMNB1-203ENST00000460265 ATP5EP2Q5VTU8 51 aa10.59□□□□□ -0.71
LMNB1-203ENST00000460265 UNQ6190/PRO20217Q6UXQ8 127 aa10.59□□□□□ -0.71
LMNB1-203ENST00000460265 LINC00474Q9P2X8 69 aa10.59□□□□□ -0.71
LMNB1-203ENST00000460265 HAMPP81172 84 aa10.58□□□□□ -0.72
LMNB1-203ENST00000460265 IGKV2-28A0A075B6P5 120 aa10.57□□□□□ -0.72
LMNB1-203ENST00000460265 IGKV2D-28P01615 120 aa10.57□□□□□ -0.72
LMNB1-203ENST00000460265 IGKV2D-24A0A075B6R9 120 aa10.57□□□□□ -0.72
LMNB1-203ENST00000460265 Q6ZTC4 211 aa10.57□□□□□ -0.72
LMNB1-203ENST00000460265 A0A1B0GUV1 79 aa10.56□□□□□ -0.72
LMNB1-203ENST00000460265 KPRPQ5T749 579 aaPredicted RBP10.56□□□□□ -0.72
LMNB1-203ENST00000460265 MPLKIPQ8TAP9 179 aa10.56□□□□□ -0.72
LMNB1-203ENST00000460265 BAHCC1Q9P281 2608 aa10.56□□□□□ -0.72
LMNB1-203ENST00000460265 TRAV7A0A075B6U4 112 aa10.56□□□□□ -0.72
LMNB1-203ENST00000460265 FP248Q71RG6 208 aaPredicted RBP10.56□□□□□ -0.72
LMNB1-203ENST00000460265 OBSCN-AS1Q96MR7 158 aa10.56□□□□□ -0.72
LMNB1-203ENST00000460265 PKD1L1Q8TDX9 2849 aa10.55□□□□□ -0.72
LMNB1-203ENST00000460265 JMJD7-PLA2G4BH0Y9G9 81 aa10.55□□□□□ -0.72
LMNB1-203ENST00000460265 NANOS2P60321 138 aaKnown RBP10.55□□□□□ -0.72
LMNB1-203ENST00000460265 Q8NAQ8 132 aa10.55□□□□□ -0.72
LMNB1-203ENST00000460265 TRBV7-6A0A0J9YX20 115 aa10.54□□□□□ -0.72
LMNB1-203ENST00000460265 LYPD5Q6UWN5 251 aa10.54□□□□□ -0.72
LMNB1-203ENST00000460265 Q8IZM0 81 aa10.53□□□□□ -0.72
LMNB1-203ENST00000460265 LELP1Q5T871 98 aa10.53□□□□□ -0.72
LMNB1-203ENST00000460265 CAMK2N2Q96S95 79 aa10.53□□□□□ -0.72
LMNB1-203ENST00000460265 CYSRT1A8MQ03 144 aa10.53□□□□□ -0.72
LMNB1-203ENST00000460265 WFDC10BQ8IUB3 73 aa10.53□□□□□ -0.72
LMNB1-203ENST00000460265 A0A0J9YWU9 116 aa10.52□□□□□ -0.72
LMNB1-203ENST00000460265 ANK3Q12955 4377 aaKnown RBP10.52□□□□□ -0.73
LMNB1-203ENST00000460265 TENM3Q9P273 2699 aa10.51□□□□□ -0.73
LMNB1-203ENST00000460265 DEFB131BA0A096LNP1 70 aa10.51□□□□□ -0.73
LMNB1-203ENST00000460265 C10orf25Q5T742 122 aa10.51□□□□□ -0.73
LMNB1-203ENST00000460265 KRTAP24-1Q3LI83 254 aa10.51□□□□□ -0.73
LMNB1-203ENST00000460265 C11orf45Q8TAV5 145 aa10.5□□□□□ -0.73
LMNB1-203ENST00000460265 LAMTOR3Q9UHA4 124 aa10.5□□□□□ -0.73
LMNB1-203ENST00000460265 C6orf99Q4VX62 202 aa10.5□□□□□ -0.73
LMNB1-203ENST00000460265 FAM19A3Q7Z5A8 133 aa10.5□□□□□ -0.73
LMNB1-203ENST00000460265 TRAV10A0A0B4J240 114 aa10.49□□□□□ -0.73
LMNB1-203ENST00000460265 EPM2AB3EWF7 344 aa10.49□□□□□ -0.73
LMNB1-203ENST00000460265 TMEM256-PLSCR3K7ERE1 68 aa10.49□□□□□ -0.73
LMNB1-203ENST00000460265 LINC00612Q8N6U2 182 aa10.49□□□□□ -0.73
LMNB1-203ENST00000460265 KLKP1Q107X0 134 aa10.48□□□□□ -0.73
LMNB1-203ENST00000460265 TRBV10-3A0A0K0K1G6 114 aa10.48□□□□□ -0.73
LMNB1-203ENST00000460265 KRTAP10-11P60412 298 aa10.47□□□□□ -0.73
LMNB1-203ENST00000460265 Q8N814 137 aa10.43□□□□□ -0.74
LMNB1-203ENST00000460265 LINC01547P58512 204 aaPredicted RBP10.42□□□□□ -0.74
LMNB1-203ENST00000460265 NDUFC1O43677 76 aa10.42□□□□□ -0.74
LMNB1-203ENST00000460265 SCXQ7RTU7 201 aa10.42□□□□□ -0.74
LMNB1-203ENST00000460265 ESRGQ1W209 222 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 183.1 ms