RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 ENHOQ6UWT2 76 aa7.22□□□□□ -1.25
PKP4-206ENST00000452162 APLNQ9ULZ1 77 aa7.22□□□□□ -1.25
PKP4-206ENST00000452162 HYDINQ4G0P3 5121 aa7.21□□□□□ -1.25
PKP4-206ENST00000452162 KMT2AQ03164 3969 aa7.2□□□□□ -1.26
PKP4-206ENST00000452162 F8WDY8 70 aa7.2□□□□□ -1.26
PKP4-206ENST00000452162 H3BT86 120 aa7.2□□□□□ -1.26
PKP4-206ENST00000452162 RPL28P46779 137 aaKnown RBP7.2□□□□□ -1.26
PKP4-206ENST00000452162 WFDC10BQ8IUB3 73 aa7.2□□□□□ -1.26
PKP4-206ENST00000452162 RYR2Q92736 4967 aa7.2□□□□□ -1.26
PKP4-206ENST00000452162 COX17Q14061 63 aa7.19□□□□□ -1.26
PKP4-206ENST00000452162 NTN5Q8WTR8 489 aaPredicted RBP7.19□□□□□ -1.26
PKP4-206ENST00000452162 LCE6AA0A183 80 aa7.19□□□□□ -1.26
PKP4-206ENST00000452162 SPAG11BQ08648 103 aa7.18□□□□□ -1.26
PKP4-206ENST00000452162 TRAV8-4A0A0B4J246 113 aa7.18□□□□□ -1.26
PKP4-206ENST00000452162 ESRGQ1W209 222 aa7.18□□□□□ -1.26
PKP4-206ENST00000452162 SMIM11BQ8TCY0 68 aa7.18□□□□□ -1.26
PKP4-206ENST00000452162 LINC00476Q8WZB0 136 aa7.18□□□□□ -1.26
PKP4-206ENST00000452162 TRACP01848 142 aa7.17□□□□□ -1.26
PKP4-206ENST00000452162 C9orf116Q5BN46 136 aaPredicted RBP7.17□□□□□ -1.26
PKP4-206ENST00000452162 C6orf223Q8N319 242 aa7.17□□□□□ -1.26
PKP4-206ENST00000452162 UBE2WQ96B02 151 aa7.17□□□□□ -1.26
PKP4-206ENST00000452162 FAM218AQ96MZ4 157 aa7.17□□□□□ -1.26
PKP4-206ENST00000452162 CDIP1Q9H305 208 aa7.17□□□□□ -1.26
PKP4-206ENST00000452162 LY6G6CO95867 125 aa7.17□□□□□ -1.26
PKP4-206ENST00000452162 C10orf25Q5T742 122 aa7.17□□□□□ -1.26
PKP4-206ENST00000452162 KRTAP26-1Q6PEX3 210 aa7.16□□□□□ -1.26
PKP4-206ENST00000452162 TEX49A0A1B0GTD5 131 aa7.16□□□□□ -1.26
PKP4-206ENST00000452162 NDUFC2O95298 119 aa7.16□□□□□ -1.26
PKP4-206ENST00000452162 UNQ6190/PRO20217Q6UXQ8 127 aa7.16□□□□□ -1.26
PKP4-206ENST00000452162 C15orf53Q8NAA6 179 aa7.15□□□□□ -1.27
PKP4-206ENST00000452162 LINC00526Q96FQ7 95 aa7.15□□□□□ -1.27
PKP4-206ENST00000452162 ANAPC13Q9BS18 74 aa7.15□□□□□ -1.27
PKP4-206ENST00000452162 GVQW2A0A096LPI5 108 aaPredicted RBP7.13□□□□□ -1.27
PKP4-206ENST00000452162 LINC01556Q5JQF7 62 aa7.13□□□□□ -1.27
PKP4-206ENST00000452162 OR13C6PQ8NH95 151 aa7.13□□□□□ -1.27
PKP4-206ENST00000452162 DNAH6Q9C0G6 4158 aa7.13□□□□□ -1.27
PKP4-206ENST00000452162 Q8NDZ9 215 aa7.13□□□□□ -1.27
PKP4-206ENST00000452162 H0YGX0 51 aa7.12□□□□□ -1.27
PKP4-206ENST00000452162 PRR3P79522 188 aaKnown RBP7.12□□□□□ -1.27
PKP4-206ENST00000452162 A0A087WYN8 130 aa7.11□□□□□ -1.27
PKP4-206ENST00000452162 C6orf48Q9UBA6 75 aa7.11□□□□□ -1.27
PKP4-206ENST00000452162 C22orf24Q9Y442 160 aa7.11□□□□□ -1.27
PKP4-206ENST00000452162 BAALC-AS2P0C853 105 aa7.11□□□□□ -1.27
PKP4-206ENST00000452162 UBE2DNLQ8IWF7 75 aa7.1□□□□□ -1.27
PKP4-206ENST00000452162 C15orf56Q8N910 161 aa7.1□□□□□ -1.27
PKP4-206ENST00000452162 Q9HAA7 133 aa7.1□□□□□ -1.27
PKP4-206ENST00000452162 DNAH10OSP0CZ25 163 aa7.1□□□□□ -1.27
PKP4-206ENST00000452162 XGP55808 180 aa7.1□□□□□ -1.27
PKP4-206ENST00000452162 NCR3O14931 201 aa7.09□□□□□ -1.27
PKP4-206ENST00000452162 HIGD2BQ4VC39 106 aa7.09□□□□□ -1.27
PKP4-206ENST00000452162 TMEM126AQ9H061 195 aa7.09□□□□□ -1.27
PKP4-206ENST00000452162 LINC00588Q9Y4M8 146 aa7.09□□□□□ -1.27
PKP4-206ENST00000452162 MT-ATP8P03928 68 aa7.09□□□□□ -1.28
PKP4-206ENST00000452162 C1orf43Q9BWL3 253 aa7.08□□□□□ -1.28
PKP4-206ENST00000452162 DNAH2Q9P225 4427 aa7.08□□□□□ -1.28
PKP4-206ENST00000452162 ZNF561-AS1K7EIQ3 104 aa7.08□□□□□ -1.28
PKP4-206ENST00000452162 LECT2O14960 151 aa7.07□□□□□ -1.28
PKP4-206ENST00000452162 DNAL4O96015 105 aa7.07□□□□□ -1.28
PKP4-206ENST00000452162 CAMK2N2Q96S95 79 aa7.07□□□□□ -1.28
PKP4-206ENST00000452162 FAM240AA0A1B0GVK7 77 aa7.06□□□□□ -1.28
PKP4-206ENST00000452162 C2orf48Q96LS8 159 aa7.06□□□□□ -1.28
PKP4-206ENST00000452162 DNAH10Q8IVF4 4471 aa7.06□□□□□ -1.28
PKP4-206ENST00000452162 IGKV2D-24A0A075B6R9 120 aa7.06□□□□□ -1.28
PKP4-206ENST00000452162 CCDC179H3BU77 68 aa7.06□□□□□ -1.28
PKP4-206ENST00000452162 Q6ZRU5 148 aa7.06□□□□□ -1.28
PKP4-206ENST00000452162 LINC00167Q96N53 147 aa7.05□□□□□ -1.28
PKP4-206ENST00000452162 FRAS1Q86XX4 4008 aa7.05□□□□□ -1.28
PKP4-206ENST00000452162 M0R2N4 97 aa7.05□□□□□ -1.28
PKP4-206ENST00000452162 A0A1B0GX51 115 aa7.04□□□□□ -1.28
PKP4-206ENST00000452162 IGLV6-57P01721 117 aa7.04□□□□□ -1.28
PKP4-206ENST00000452162 S100A7L2Q5SY68 101 aa7.04□□□□□ -1.28
PKP4-206ENST00000452162 XAGE1AQ9HD64 81 aa7.04□□□□□ -1.28
PKP4-206ENST00000452162 RPL18AQ02543 176 aaKnown RBP7.03□□□□□ -1.28
PKP4-206ENST00000452162 C6orf99Q4VX62 202 aa7.03□□□□□ -1.28
PKP4-206ENST00000452162 UPK3BQ9BT76 320 aa7.03□□□□□ -1.28
PKP4-206ENST00000452162 SLPIP03973 132 aa7.03□□□□□ -1.28
PKP4-206ENST00000452162 Q8N814 137 aa7.03□□□□□ -1.28
PKP4-206ENST00000452162 OBSCN-AS1Q96MR7 158 aa7.02□□□□□ -1.29
PKP4-206ENST00000452162 NDUFC2-KCTD14E9PQ53 114 aa7.02□□□□□ -1.29
PKP4-206ENST00000452162 INAFM2P0DMQ5 153 aa7.02□□□□□ -1.29
PKP4-206ENST00000452162 C9orf129Q5T035 196 aaKnown RBP7.02□□□□□ -1.29
PKP4-206ENST00000452162 ORMDL1Q9P0S3 153 aa7.02□□□□□ -1.29
PKP4-206ENST00000452162 VPREB1P12018 145 aa7.01□□□□□ -1.29
PKP4-206ENST00000452162 SEC61GP60059 68 aa7.01□□□□□ -1.29
PKP4-206ENST00000452162 Q6ZR54 194 aa7.01□□□□□ -1.29
PKP4-206ENST00000452162 SYCNQ0VAF6 134 aa7.01□□□□□ -1.29
PKP4-206ENST00000452162 TRBV10-3A0A0K0K1G6 114 aa7□□□□□ -1.29
PKP4-206ENST00000452162 NBDYA0A0U1RRE5 68 aa7□□□□□ -1.29
PKP4-206ENST00000452162 ACYP1P07311 99 aa7□□□□□ -1.29
PKP4-206ENST00000452162 LINC00575Q6W349 94 aa7□□□□□ -1.29
PKP4-206ENST00000452162 KRTAP1-5Q9BYS1 174 aa7□□□□□ -1.29
PKP4-206ENST00000452162 FAT2Q9NYQ8 4349 aa7□□□□□ -1.29
PKP4-206ENST00000452162 DNAH17Q9UFH2 4485 aa7□□□□□ -1.29
PKP4-206ENST00000452162 Q6ZRP5 223 aa6.99□□□□□ -1.29
PKP4-206ENST00000452162 TRAV23DV6A0A075B6W5 121 aa6.98□□□□□ -1.29
PKP4-206ENST00000452162 SNCGO76070 127 aa6.98□□□□□ -1.29
PKP4-206ENST00000452162 NDUFV3P56181 108 aaKnown RBP6.97□□□□□ -1.29
PKP4-206ENST00000452162 GAGE2EQ4V326 116 aa6.97□□□□□ -1.29
PKP4-206ENST00000452162 FAM19A5Q7Z5A7 132 aaPredicted RBP6.97□□□□□ -1.29
PKP4-206ENST00000452162 GAGE2DQ9UEU5 116 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms