RNA–Protein interactions for RNA: ENST00000451716.5

COL27A1-202, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 2,865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-202ENST00000451716 NOTCH1P46531 2555 aa8.34□□□□□ -1.08
COL27A1-202ENST00000451716 Q8NAQ8 132 aa8.33□□□□□ -1.08
COL27A1-202ENST00000451716 COX6CP09669 75 aa8.33□□□□□ -1.08
COL27A1-202ENST00000451716 OXLD1Q5BKU9 147 aa8.33□□□□□ -1.08
COL27A1-202ENST00000451716 A0A087WZ39 114 aa8.32□□□□□ -1.08
COL27A1-202ENST00000451716 IGLV10-54A0A075B6I4 117 aa8.32□□□□□ -1.08
COL27A1-202ENST00000451716 LINC00158P58513 81 aa8.32□□□□□ -1.08
COL27A1-202ENST00000451716 IGKV3D-7A0A0C4DH55 119 aa8.32□□□□□ -1.08
COL27A1-202ENST00000451716 C20orf197Q8N268 126 aa8.32□□□□□ -1.08
COL27A1-202ENST00000451716 LINC00269Q8N2A0 174 aa8.32□□□□□ -1.08
COL27A1-202ENST00000451716 WFDC9Q8NEX5 89 aa8.31□□□□□ -1.08
COL27A1-202ENST00000451716 C11orf45Q8TAV5 145 aa8.31□□□□□ -1.08
COL27A1-202ENST00000451716 NBEAL1Q6ZS30 2694 aa8.3□□□□□ -1.08
COL27A1-202ENST00000451716 A0A1B0GUV1 79 aa8.3□□□□□ -1.08
COL27A1-202ENST00000451716 MRPL55Q7Z7F7 128 aaKnown RBP8.3□□□□□ -1.08
COL27A1-202ENST00000451716 LST1O00453 97 aa8.29□□□□□ -1.08
COL27A1-202ENST00000451716 RBM3P98179 157 aaKnown RBP8.29□□□□□ -1.08
COL27A1-202ENST00000451716 CYSRT1A8MQ03 144 aa8.29□□□□□ -1.08
COL27A1-202ENST00000451716 ANGP03950 147 aaKnown RBP8.29□□□□□ -1.08
COL27A1-202ENST00000451716 LYPD5Q6UWN5 251 aa8.29□□□□□ -1.08
COL27A1-202ENST00000451716 MIFP14174 115 aa8.28□□□□□ -1.08
COL27A1-202ENST00000451716 COPS9Q8WXC6 57 aa8.28□□□□□ -1.08
COL27A1-202ENST00000451716 SND1-IT1Q9HBX3 110 aa8.28□□□□□ -1.08
COL27A1-202ENST00000451716 TENM3Q9P273 2699 aa8.28□□□□□ -1.08
COL27A1-202ENST00000451716 SPART-AS1P0CW21 52 aa8.28□□□□□ -1.08
COL27A1-202ENST00000451716 LINC00337Q8N6G1 96 aa8.28□□□□□ -1.08
COL27A1-202ENST00000451716 MPLKIPQ8TAP9 179 aa8.28□□□□□ -1.08
COL27A1-202ENST00000451716 IGKV2-28A0A075B6P5 120 aa8.27□□□□□ -1.09
COL27A1-202ENST00000451716 IGKV2D-28P01615 120 aa8.27□□□□□ -1.09
COL27A1-202ENST00000451716 CCL18P55774 89 aa8.27□□□□□ -1.09
COL27A1-202ENST00000451716 H7BZZ5 65 aa8.27□□□□□ -1.09
COL27A1-202ENST00000451716 KRTAP10-11P60412 298 aa8.26□□□□□ -1.09
COL27A1-202ENST00000451716 Q6ZRU5 148 aa8.26□□□□□ -1.09
COL27A1-202ENST00000451716 CCKP06307 115 aa8.26□□□□□ -1.09
COL27A1-202ENST00000451716 REG3AQ06141 175 aa8.26□□□□□ -1.09
COL27A1-202ENST00000451716 CHCHD10Q8WYQ3 142 aaPredicted RBP8.26□□□□□ -1.09
COL27A1-202ENST00000451716 TRBV7-6A0A0J9YX20 115 aa8.25□□□□□ -1.09
COL27A1-202ENST00000451716 S100A7L2Q5SY68 101 aa8.25□□□□□ -1.09
COL27A1-202ENST00000451716 PRR15Q8IV56 129 aa8.25□□□□□ -1.09
COL27A1-202ENST00000451716 IBA57-AS1B1ANH7 110 aa8.25□□□□□ -1.09
COL27A1-202ENST00000451716 COX7A2LO14548 114 aa8.25□□□□□ -1.09
COL27A1-202ENST00000451716 GHRHP01286 108 aa8.24□□□□□ -1.09
COL27A1-202ENST00000451716 CRPP02741 224 aa8.24□□□□□ -1.09
COL27A1-202ENST00000451716 KRTAP24-1Q3LI83 254 aa8.24□□□□□ -1.09
COL27A1-202ENST00000451716 FAM218AQ96MZ4 157 aa8.24□□□□□ -1.09
COL27A1-202ENST00000451716 CMYA5Q8N3K9 4069 aa8.23□□□□□ -1.09
COL27A1-202ENST00000451716 C9orf116Q5BN46 136 aaPredicted RBP8.23□□□□□ -1.09
COL27A1-202ENST00000451716 H3BS24 57 aa8.23□□□□□ -1.09
COL27A1-202ENST00000451716 CD164L2Q6UWJ8 174 aa8.23□□□□□ -1.09
COL27A1-202ENST00000451716 TRAV13-2A0A0B4J235 113 aa8.22□□□□□ -1.09
COL27A1-202ENST00000451716 Q8IZM0 81 aa8.22□□□□□ -1.09
COL27A1-202ENST00000451716 KLK12Q9UKR0 248 aa8.22□□□□□ -1.09
COL27A1-202ENST00000451716 PRR3P79522 188 aaKnown RBP8.21□□□□□ -1.09
COL27A1-202ENST00000451716 KIAA0087Q14695 138 aa8.21□□□□□ -1.09
COL27A1-202ENST00000451716 SMIM11BQ8TCY0 68 aa8.21□□□□□ -1.09
COL27A1-202ENST00000451716 Q9HAA7 133 aa8.21□□□□□ -1.1
COL27A1-202ENST00000451716 Q6JHZ5 121 aa8.2□□□□□ -1.1
COL27A1-202ENST00000451716 LELP1Q5T871 98 aa8.2□□□□□ -1.1
COL27A1-202ENST00000451716 RBM12B-AS1Q9P1G2 102 aa8.2□□□□□ -1.1
COL27A1-202ENST00000451716 C6orf223Q8N319 242 aa8.2□□□□□ -1.1
COL27A1-202ENST00000451716 TRAV23DV6A0A075B6W5 121 aa8.19□□□□□ -1.1
COL27A1-202ENST00000451716 RPL28P46779 137 aaKnown RBP8.19□□□□□ -1.1
COL27A1-202ENST00000451716 Q6ZTC4 211 aa8.18□□□□□ -1.1
COL27A1-202ENST00000451716 A0A087WYN8 130 aa8.17□□□□□ -1.1
COL27A1-202ENST00000451716 INAFM2P0DMQ5 153 aa8.17□□□□□ -1.1
COL27A1-202ENST00000451716 C10orf25Q5T742 122 aa8.17□□□□□ -1.1
COL27A1-202ENST00000451716 BAALC-AS2P0C853 105 aa8.17□□□□□ -1.1
COL27A1-202ENST00000451716 FAM229BQ4G0N7 80 aa8.17□□□□□ -1.1
COL27A1-202ENST00000451716 F8WEM9 126 aa8.16□□□□□ -1.1
COL27A1-202ENST00000451716 ENHOQ6UWT2 76 aa8.16□□□□□ -1.1
COL27A1-202ENST00000451716 DNAL4O96015 105 aa8.16□□□□□ -1.1
COL27A1-202ENST00000451716 KPRPQ5T749 579 aaPredicted RBP8.16□□□□□ -1.1
COL27A1-202ENST00000451716 UNQ6190/PRO20217Q6UXQ8 127 aa8.16□□□□□ -1.1
COL27A1-202ENST00000451716 WFDC10BQ8IUB3 73 aa8.16□□□□□ -1.1
COL27A1-202ENST00000451716 SNURFQ9Y675 71 aa8.16□□□□□ -1.1
COL27A1-202ENST00000451716 PRB2P02812 416 aaPredicted RBP8.15□□□□□ -1.1
COL27A1-202ENST00000451716 LINC00846Q9NV44 126 aa8.15□□□□□ -1.1
COL27A1-202ENST00000451716 C22orf24Q9Y442 160 aa8.15□□□□□ -1.1
COL27A1-202ENST00000451716 MGAM2Q2M2H8 2515 aa8.15□□□□□ -1.1
COL27A1-202ENST00000451716 SPAG11BQ08648 103 aa8.15□□□□□ -1.11
COL27A1-202ENST00000451716 Q8NDZ9 215 aa8.15□□□□□ -1.11
COL27A1-202ENST00000451716 RMI2Q96E14 147 aa8.14□□□□□ -1.11
COL27A1-202ENST00000451716 A0A0J9YWU9 116 aa8.14□□□□□ -1.11
COL27A1-202ENST00000451716 PRR34Q9NV39 138 aa8.14□□□□□ -1.11
COL27A1-202ENST00000451716 NANOS2P60321 138 aaKnown RBP8.13□□□□□ -1.11
COL27A1-202ENST00000451716 LAMTOR3Q9UHA4 124 aa8.13□□□□□ -1.11
COL27A1-202ENST00000451716 EGFEM1PQ0D2K5 195 aa8.13□□□□□ -1.11
COL27A1-202ENST00000451716 LECT2O14960 151 aa8.12□□□□□ -1.11
COL27A1-202ENST00000451716 SLPIP03973 132 aa8.12□□□□□ -1.11
COL27A1-202ENST00000451716 NCR3O14931 201 aa8.12□□□□□ -1.11
COL27A1-202ENST00000451716 KLKP1Q107X0 134 aa8.11□□□□□ -1.11
COL27A1-202ENST00000451716 C9orf129Q5T035 196 aaKnown RBP8.11□□□□□ -1.11
COL27A1-202ENST00000451716 COX17Q14061 63 aa8.1□□□□□ -1.11
COL27A1-202ENST00000451716 ESRGQ1W209 222 aa8.1□□□□□ -1.11
COL27A1-202ENST00000451716 HIGD2BQ4VC39 106 aa8.1□□□□□ -1.11
COL27A1-202ENST00000451716 H0YGX0 51 aa8.09□□□□□ -1.11
COL27A1-202ENST00000451716 C14orf132Q9NPU4 83 aa8.09□□□□□ -1.11
COL27A1-202ENST00000451716 DNAH3Q8TD57 4116 aa8.09□□□□□ -1.11
COL27A1-202ENST00000451716 TM2D3Q9BRN9 247 aa8.08□□□□□ -1.12
COL27A1-202ENST00000451716 DEFB131BA0A096LNP1 70 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms