RNA–Protein interactions for RNA: ENST00000449116.6

SHANK2-210, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 939 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-210ENST00000449116 Q6ZVH6 145 aa9.3□□□□□ -0.92
SHANK2-210ENST00000449116 DPH3Q96FX2 82 aa9.3□□□□□ -0.92
SHANK2-210ENST00000449116 MIEN1Q9BRT3 115 aa9.3□□□□□ -0.92
SHANK2-210ENST00000449116 PRO1933Q9H354 126 aa9.3□□□□□ -0.92
SHANK2-210ENST00000449116 SPANXB1Q9NS25 103 aaPredicted RBP9.3□□□□□ -0.92
SHANK2-210ENST00000449116 HIGD1BQ9P298 99 aa9.3□□□□□ -0.92
SHANK2-210ENST00000449116 LOC107984156A0A0G2JMH3 177 aa9.29□□□□□ -0.92
SHANK2-210ENST00000449116 ARL17AQ8IVW1 177 aa9.29□□□□□ -0.92
SHANK2-210ENST00000449116 LINC00308Q8TCZ7 52 aa9.29□□□□□ -0.92
SHANK2-210ENST00000449116 NPC2P61916 151 aa9.28□□□□□ -0.92
SHANK2-210ENST00000449116 SRSF9Q13242 221 aaKnown RBP eCLIP9.28□□□□□ -0.92
SHANK2-210ENST00000449116 COPS9Q8WXC6 57 aa9.28□□□□□ -0.92
SHANK2-210ENST00000449116 A0A087WYN8 130 aa9.27□□□□□ -0.93
SHANK2-210ENST00000449116 A0A1W2PNN7 141 aa9.27□□□□□ -0.93
SHANK2-210ENST00000449116 FAM168BA1KXE4 195 aa9.27□□□□□ -0.93
SHANK2-210ENST00000449116 IFITM1P13164 125 aa9.27□□□□□ -0.93
SHANK2-210ENST00000449116 SOSTDC1Q6X4U4 206 aa9.27□□□□□ -0.93
SHANK2-210ENST00000449116 PLA2G2DQ9UNK4 145 aa9.27□□□□□ -0.93
SHANK2-210ENST00000449116 APOBP04114 4563 aaKnown RBP9.26□□□□□ -0.93
SHANK2-210ENST00000449116 TSTD3H0UI37 97 aa9.26□□□□□ -0.93
SHANK2-210ENST00000449116 RPL24P83731 157 aaKnown RBP9.26□□□□□ -0.93
SHANK2-210ENST00000449116 PPDPFQ9H3Y8 114 aa9.26□□□□□ -0.93
SHANK2-210ENST00000449116 PLAC8Q9NZF1 115 aa9.26□□□□□ -0.93
SHANK2-210ENST00000449116 HERC2O95714 4834 aa9.25□□□□□ -0.93
SHANK2-210ENST00000449116 EIF4EBP3O60516 100 aaPredicted RBP9.25□□□□□ -0.93
SHANK2-210ENST00000449116 SERTAD4-AS1Q5TG53 156 aa9.25□□□□□ -0.93
SHANK2-210ENST00000449116 SCXQ7RTU7 201 aa9.25□□□□□ -0.93
SHANK2-210ENST00000449116 FAM19A5Q7Z5A7 132 aaPredicted RBP9.25□□□□□ -0.93
SHANK2-210ENST00000449116 MUSTN1Q8IVN3 82 aa9.25□□□□□ -0.93
SHANK2-210ENST00000449116 CIRBP-AS1Q8TBR5 109 aa9.25□□□□□ -0.93
SHANK2-210ENST00000449116 HIST1H4GQ99525 98 aa9.25□□□□□ -0.93
SHANK2-210ENST00000449116 VPREB1P12018 145 aa9.24□□□□□ -0.93
SHANK2-210ENST00000449116 HNRNPA3P51991 378 aaKnown RBP9.24□□□□□ -0.93
SHANK2-210ENST00000449116 KRTAP7-1Q8IUC3 87 aa9.24□□□□□ -0.93
SHANK2-210ENST00000449116 IGLV5-37A0A075B6J1 123 aa9.23□□□□□ -0.93
SHANK2-210ENST00000449116 EPM2AB3EWF7 344 aa9.23□□□□□ -0.93
SHANK2-210ENST00000449116 NDUFC2O95298 119 aa9.23□□□□□ -0.93
SHANK2-210ENST00000449116 Q8NDZ9 215 aa9.23□□□□□ -0.93
SHANK2-210ENST00000449116 HAMPP81172 84 aa9.22□□□□□ -0.93
SHANK2-210ENST00000449116 TAL2Q16559 108 aa9.22□□□□□ -0.93
SHANK2-210ENST00000449116 NKAPP1Q8N9T2 125 aa9.22□□□□□ -0.93
SHANK2-210ENST00000449116 M0QXV9 152 aa9.21□□□□□ -0.94
SHANK2-210ENST00000449116 XGP55808 180 aa9.21□□□□□ -0.94
SHANK2-210ENST00000449116 HSD52Q0P140 79 aa9.21□□□□□ -0.94
SHANK2-210ENST00000449116 C22orf24Q9Y442 160 aa9.21□□□□□ -0.94
SHANK2-210ENST00000449116 CDK2AP2O75956 126 aa9.19□□□□□ -0.94
SHANK2-210ENST00000449116 PRR3P79522 188 aaKnown RBP9.19□□□□□ -0.94
SHANK2-210ENST00000449116 LBHQ53QV2 105 aaPredicted RBP9.19□□□□□ -0.94
SHANK2-210ENST00000449116 PHF5AQ7RTV0 110 aaKnown RBP9.19□□□□□ -0.94
SHANK2-210ENST00000449116 MRPL55Q7Z7F7 128 aaKnown RBP9.19□□□□□ -0.94
SHANK2-210ENST00000449116 CEND1Q8N111 149 aa9.19□□□□□ -0.94
SHANK2-210ENST00000449116 TRBV10-2A0A0K0K1G8 114 aa9.18□□□□□ -0.94
SHANK2-210ENST00000449116 M0R378 163 aa9.18□□□□□ -0.94
SHANK2-210ENST00000449116 NCR3O14931 201 aa9.18□□□□□ -0.94
SHANK2-210ENST00000449116 A4D1N5 150 aa9.17□□□□□ -0.94
SHANK2-210ENST00000449116 C7orf33Q8WU49 177 aa9.17□□□□□ -0.94
SHANK2-210ENST00000449116 IGKV2-28A0A075B6P5 120 aa9.16□□□□□ -0.94
SHANK2-210ENST00000449116 GAGE10A6NGK3 116 aa9.16□□□□□ -0.94
SHANK2-210ENST00000449116 IGKV2D-28P01615 120 aa9.16□□□□□ -0.94
SHANK2-210ENST00000449116 LINC00167Q96N53 147 aa9.16□□□□□ -0.94
SHANK2-210ENST00000449116 RYR1P21817 5038 aa9.15□□□□□ -0.94
SHANK2-210ENST00000449116 DDTP30046 118 aa9.15□□□□□ -0.94
SHANK2-210ENST00000449116 UBE2BP63146 152 aa9.15□□□□□ -0.94
SHANK2-210ENST00000449116 CTAG1AP78358 180 aa9.15□□□□□ -0.94
SHANK2-210ENST00000449116 TMEM238LA0A1B0GVL6 79 aa9.14□□□□□ -0.95
SHANK2-210ENST00000449116 A6NJY4 79 aa9.14□□□□□ -0.95
SHANK2-210ENST00000449116 FXYD2P54710 66 aa9.14□□□□□ -0.95
SHANK2-210ENST00000449116 S100A7L2Q5SY68 101 aa9.13□□□□□ -0.95
SHANK2-210ENST00000449116 LINC00337Q8N6G1 96 aa9.13□□□□□ -0.95
SHANK2-210ENST00000449116 IGLV1-50A0A075B6I6 118 aa9.12□□□□□ -0.95
SHANK2-210ENST00000449116 TRBV10-3A0A0K0K1G6 114 aa9.12□□□□□ -0.95
SHANK2-210ENST00000449116 RPL37AP8A6NKH3 93 aa9.12□□□□□ -0.95
SHANK2-210ENST00000449116 IGLV6-57P01721 117 aa9.12□□□□□ -0.95
SHANK2-210ENST00000449116 HSPG2P98160 4391 aa9.12□□□□□ -0.95
SHANK2-210ENST00000449116 TRAV13-2A0A0B4J235 113 aa9.11□□□□□ -0.95
SHANK2-210ENST00000449116 OR13C6PQ8NH95 151 aa9.11□□□□□ -0.95
SHANK2-210ENST00000449116 TMEM126AQ9H061 195 aa9.11□□□□□ -0.95
SHANK2-210ENST00000449116 A6NDN8 102 aa9.1□□□□□ -0.95
SHANK2-210ENST00000449116 M0R143 59 aa9.1□□□□□ -0.95
SHANK2-210ENST00000449116 SMR3BP02814 79 aaPredicted RBP9.1□□□□□ -0.95
SHANK2-210ENST00000449116 CFC1BP0CG36 223 aa9.1□□□□□ -0.95
SHANK2-210ENST00000449116 CFC1P0CG37 223 aa9.1□□□□□ -0.95
SHANK2-210ENST00000449116 BVES-AS1Q5T3Y7 98 aa9.1□□□□□ -0.95
SHANK2-210ENST00000449116 KRTAP11-1Q8IUC1 163 aa9.1□□□□□ -0.95
SHANK2-210ENST00000449116 KIAA1109Q2LD37 5005 aa9.1□□□□□ -0.95
SHANK2-210ENST00000449116 A0A0B4J2C4 111 aa9.09□□□□□ -0.95
SHANK2-210ENST00000449116 HINT1P49773 126 aaPredicted RBP9.09□□□□□ -0.95
SHANK2-210ENST00000449116 LINC00528Q8N1L1 170 aa9.09□□□□□ -0.95
SHANK2-210ENST00000449116 RAB37Q96AX2 223 aa9.09□□□□□ -0.95
SHANK2-210ENST00000449116 KCNQ1DNQ9H478 68 aa9.08□□□□□ -0.96
SHANK2-210ENST00000449116 NHP2Q9NX24 153 aaKnown RBP9.08□□□□□ -0.96
SHANK2-210ENST00000449116 CBY1Q9Y3M2 126 aa9.08□□□□□ -0.96
SHANK2-210ENST00000449116 FAT1Q14517 4588 aa9.08□□□□□ -0.96
SHANK2-210ENST00000449116 PRYO14603 147 aa9.07□□□□□ -0.96
SHANK2-210ENST00000449116 PSORS1C2Q9UIG4 136 aa9.07□□□□□ -0.96
SHANK2-210ENST00000449116 TRAV23DV6A0A075B6W5 121 aa9.06□□□□□ -0.96
SHANK2-210ENST00000449116 RPL13AP40429 203 aaKnown RBP9.06□□□□□ -0.96
SHANK2-210ENST00000449116 REG3GQ6UW15 175 aa9.06□□□□□ -0.96
SHANK2-210ENST00000449116 A0A1B0GWB2 263 aa9.05□□□□□ -0.96
SHANK2-210ENST00000449116 VPS13BQ7Z7G8 4022 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 314.4 ms