RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 NRACQ8N912 160 aa3.93□□□□□ -1.78
CDC42BPA-209ENST00000448940 DNAH10OSP0CZ25 163 aa3.93□□□□□ -1.78
CDC42BPA-209ENST00000448940 TMEM256-PLSCR3K7ERE1 68 aa3.93□□□□□ -1.78
CDC42BPA-209ENST00000448940 TRBV27A0A0K0K1C4 114 aa3.92□□□□□ -1.78
CDC42BPA-209ENST00000448940 A0A087WTM6 91 aa3.92□□□□□ -1.78
CDC42BPA-209ENST00000448940 C9orf116Q5BN46 136 aaPredicted RBP3.92□□□□□ -1.78
CDC42BPA-209ENST00000448940 PRR9Q5T870 116 aa3.92□□□□□ -1.78
CDC42BPA-209ENST00000448940 M0QY20 66 aa3.92□□□□□ -1.78
CDC42BPA-209ENST00000448940 V9GYV3 84 aa3.92□□□□□ -1.78
CDC42BPA-209ENST00000448940 SMIM27A0A1W2PRY6 76 aa3.92□□□□□ -1.78
CDC42BPA-209ENST00000448940 NDUFC1O43677 76 aa3.92□□□□□ -1.78
CDC42BPA-209ENST00000448940 KALRNO60229 2985 aa3.92□□□□□ -1.78
CDC42BPA-209ENST00000448940 CD164Q04900 197 aa3.91□□□□□ -1.78
CDC42BPA-209ENST00000448940 C10orf25Q5T742 122 aa3.91□□□□□ -1.78
CDC42BPA-209ENST00000448940 TRBV30A0A0K0K1B3 111 aa3.91□□□□□ -1.78
CDC42BPA-209ENST00000448940 RPL39P62891 51 aaKnown RBP3.91□□□□□ -1.78
CDC42BPA-209ENST00000448940 RETNLBQ9BQ08 111 aa3.91□□□□□ -1.78
CDC42BPA-209ENST00000448940 F8VRH5 84 aa3.91□□□□□ -1.78
CDC42BPA-209ENST00000448940 APLNQ9ULZ1 77 aa3.91□□□□□ -1.78
CDC42BPA-209ENST00000448940 IBA57-AS1B1ANH7 110 aa3.91□□□□□ -1.78
CDC42BPA-209ENST00000448940 LINC00959A0A1B0GUT2 108 aa3.9□□□□□ -1.78
CDC42BPA-209ENST00000448940 COX7BP24311 80 aa3.9□□□□□ -1.79
CDC42BPA-209ENST00000448940 Q9UF83 564 aa3.9□□□□□ -1.79
CDC42BPA-209ENST00000448940 LINC01547P58512 204 aaPredicted RBP3.9□□□□□ -1.79
CDC42BPA-209ENST00000448940 UPK3BQ9BT76 320 aa3.9□□□□□ -1.79
CDC42BPA-209ENST00000448940 IGLC6P0CF74 106 aa3.89□□□□□ -1.79
CDC42BPA-209ENST00000448940 Q6ZQY7 126 aa3.89□□□□□ -1.79
CDC42BPA-209ENST00000448940 C8orf87E5RJ46 101 aa3.89□□□□□ -1.79
CDC42BPA-209ENST00000448940 A0A1W2PPM0 123 aa3.89□□□□□ -1.79
CDC42BPA-209ENST00000448940 SND1-IT1Q9HBX3 110 aa3.89□□□□□ -1.79
CDC42BPA-209ENST00000448940 PSPHP1O15172 72 aa3.89□□□□□ -1.79
CDC42BPA-209ENST00000448940 LAMA1P25391 3075 aa3.89□□□□□ -1.79
CDC42BPA-209ENST00000448940 A0A0A0MQY5 61 aa3.88□□□□□ -1.79
CDC42BPA-209ENST00000448940 LINC00173Q6ZV60 143 aa3.88□□□□□ -1.79
CDC42BPA-209ENST00000448940 Q6ZVQ6 151 aa3.88□□□□□ -1.79
CDC42BPA-209ENST00000448940 Q8N814 137 aa3.88□□□□□ -1.79
CDC42BPA-209ENST00000448940 LINC00304Q8N9R0 145 aa3.88□□□□□ -1.79
CDC42BPA-209ENST00000448940 TOMM6Q96B49 74 aa3.88□□□□□ -1.79
CDC42BPA-209ENST00000448940 CELSR3Q9NYQ7 3312 aa3.88□□□□□ -1.79
CDC42BPA-209ENST00000448940 TACC2O95359 2948 aa3.88□□□□□ -1.79
CDC42BPA-209ENST00000448940 PRO1854Q9UHT4 67 aa3.88□□□□□ -1.79
CDC42BPA-209ENST00000448940 MRPS12O15235 138 aaKnown RBP3.88□□□□□ -1.79
CDC42BPA-209ENST00000448940 LUZP6Q538Z0 58 aa3.88□□□□□ -1.79
CDC42BPA-209ENST00000448940 CEND1Q8N111 149 aa3.88□□□□□ -1.79
CDC42BPA-209ENST00000448940 COL12A1Q99715 3063 aa3.88□□□□□ -1.79
CDC42BPA-209ENST00000448940 TRBV6-5A0A0K0K1A5 114 aa3.87□□□□□ -1.79
CDC42BPA-209ENST00000448940 C11orf21Q9P2W6 132 aa3.87□□□□□ -1.79
CDC42BPA-209ENST00000448940 A0A1B0GUV1 79 aa3.87□□□□□ -1.79
CDC42BPA-209ENST00000448940 SSBP3-AS1Q7Z2R9 100 aa3.87□□□□□ -1.79
CDC42BPA-209ENST00000448940 VPS13AQ96RL7 3174 aa3.87□□□□□ -1.79
CDC42BPA-209ENST00000448940 OXTP01178 125 aa3.87□□□□□ -1.79
CDC42BPA-209ENST00000448940 LINC00694P0DN24 101 aa3.87□□□□□ -1.79
CDC42BPA-209ENST00000448940 C11orf1Q9H5F2 150 aa3.87□□□□□ -1.79
CDC42BPA-209ENST00000448940 C11orf72Q8NBR9 251 aa3.87□□□□□ -1.79
CDC42BPA-209ENST00000448940 KIF25-AS1Q9Y6Z4 181 aa3.87□□□□□ -1.79
CDC42BPA-209ENST00000448940 APCP25054 2843 aa3.87□□□□□ -1.79
CDC42BPA-209ENST00000448940 A0A087WYN8 130 aa3.86□□□□□ -1.79
CDC42BPA-209ENST00000448940 SDIM1Q6ZPB5 146 aa3.86□□□□□ -1.79
CDC42BPA-209ENST00000448940 KLK9Q2XQG4 91 aa3.86□□□□□ -1.79
CDC42BPA-209ENST00000448940 BVES-AS1Q5T3Y7 98 aa3.86□□□□□ -1.79
CDC42BPA-209ENST00000448940 CFAP47Q6ZTR5 3102 aa3.86□□□□□ -1.79
CDC42BPA-209ENST00000448940 LINC00643Q86TS7 51 aa3.86□□□□□ -1.79
CDC42BPA-209ENST00000448940 C18orf32Q8TCD1 76 aa3.86□□□□□ -1.79
CDC42BPA-209ENST00000448940 SPEGQ15772 3267 aa3.86□□□□□ -1.79
CDC42BPA-209ENST00000448940 IGLV5-45A0A087WSX0 123 aa3.86□□□□□ -1.79
CDC42BPA-209ENST00000448940 LST1O00453 97 aa3.86□□□□□ -1.79
CDC42BPA-209ENST00000448940 BPY2O14599 106 aa3.86□□□□□ -1.79
CDC42BPA-209ENST00000448940 IGLC3P0DOY3 106 aa3.86□□□□□ -1.79
CDC42BPA-209ENST00000448940 MIR7-3HGQ8N6C7 128 aa3.86□□□□□ -1.79
CDC42BPA-209ENST00000448940 ACYP2P14621 99 aa3.86□□□□□ -1.79
CDC42BPA-209ENST00000448940 C6orf99Q4VX62 202 aa3.86□□□□□ -1.79
CDC42BPA-209ENST00000448940 MOBPQ13875 183 aa3.85□□□□□ -1.79
CDC42BPA-209ENST00000448940 PHF5AQ7RTV0 110 aaKnown RBP3.85□□□□□ -1.79
CDC42BPA-209ENST00000448940 EYSQ5T1H1 3165 aa3.85□□□□□ -1.79
CDC42BPA-209ENST00000448940 CDKN2A-AS1Q9UH64 79 aa3.85□□□□□ -1.79
CDC42BPA-209ENST00000448940 TRBV10-2A0A0K0K1G8 114 aa3.85□□□□□ -1.79
CDC42BPA-209ENST00000448940 RBM12B-AS1Q9P1G2 102 aa3.85□□□□□ -1.79
CDC42BPA-209ENST00000448940 M0R378 163 aa3.84□□□□□ -1.79
CDC42BPA-209ENST00000448940 NUPR1O60356 82 aa3.84□□□□□ -1.79
CDC42BPA-209ENST00000448940 PSORS1C2Q9UIG4 136 aa3.84□□□□□ -1.79
CDC42BPA-209ENST00000448940 CDC42SE2Q9NRR3 84 aa3.84□□□□□ -1.79
CDC42BPA-209ENST00000448940 DMXL2Q8TDJ6 3036 aa3.84□□□□□ -1.79
CDC42BPA-209ENST00000448940 FAM30AQ9NZY2 134 aa3.84□□□□□ -1.79
CDC42BPA-209ENST00000448940 IGLV7-46A0A075B6I9 117 aa3.84□□□□□ -1.8
CDC42BPA-209ENST00000448940 H3BQ85 93 aa3.84□□□□□ -1.8
CDC42BPA-209ENST00000448940 CRIP1P50238 77 aa3.84□□□□□ -1.8
CDC42BPA-209ENST00000448940 LINC00242Q5T6M2 205 aa3.84□□□□□ -1.8
CDC42BPA-209ENST00000448940 Q6ZSA8 131 aa3.84□□□□□ -1.8
CDC42BPA-209ENST00000448940 TMEM223A0PJW6 202 aa3.84□□□□□ -1.8
CDC42BPA-209ENST00000448940 PYGO1Q9Y3Y4 419 aa3.84□□□□□ -1.8
CDC42BPA-209ENST00000448940 IGLV4-60A0A075B6I1 120 aa3.83□□□□□ -1.8
CDC42BPA-209ENST00000448940 PRLHP81277 87 aa3.83□□□□□ -1.8
CDC42BPA-209ENST00000448940 UNQ6190/PRO20217Q6UXQ8 127 aa3.83□□□□□ -1.8
CDC42BPA-209ENST00000448940 Q9BRP9 147 aa3.83□□□□□ -1.8
CDC42BPA-209ENST00000448940 ATMQ13315 3056 aa3.83□□□□□ -1.8
CDC42BPA-209ENST00000448940 CFC1BP0CG36 223 aa3.83□□□□□ -1.8
CDC42BPA-209ENST00000448940 CFC1P0CG37 223 aa3.83□□□□□ -1.8
CDC42BPA-209ENST00000448940 FAM19A3Q7Z5A8 133 aa3.83□□□□□ -1.8
CDC42BPA-209ENST00000448940 LINC00846Q9NV44 126 aa3.83□□□□□ -1.8
CDC42BPA-209ENST00000448940 A0A0J9YXY3 114 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms