RNA–Protein interactions for RNA: ENST00000448878.6

CHCHD3-203, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 5 BASIC

Gene CHCHD3, Length 1,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-203ENST00000448878 H3BRM9 83 aa10.19□□□□□ -0.78
CHCHD3-203ENST00000448878 SNAPINO95295 136 aa10.19□□□□□ -0.78
CHCHD3-203ENST00000448878 KIAA1644Q3SXP7 199 aa10.19□□□□□ -0.78
CHCHD3-203ENST00000448878 KRTAP4-1Q9BYQ7 146 aa10.19□□□□□ -0.78
CHCHD3-203ENST00000448878 CST9LQ9H4G1 147 aa10.19□□□□□ -0.78
CHCHD3-203ENST00000448878 MT-ND4LP03901 98 aa10.18□□□□□ -0.78
CHCHD3-203ENST00000448878 Q8NBF4 154 aa10.18□□□□□ -0.78
CHCHD3-203ENST00000448878 MRPL18Q9H0U6 180 aaKnown RBP10.18□□□□□ -0.78
CHCHD3-203ENST00000448878 ANAPC16Q96DE5 110 aa10.17□□□□□ -0.78
CHCHD3-203ENST00000448878 ZNF625Q96I27 306 aaPredicted RBP10.17□□□□□ -0.78
CHCHD3-203ENST00000448878 SPRR4Q96PI1 79 aa10.17□□□□□ -0.78
CHCHD3-203ENST00000448878 ERG28Q9UKR5 140 aa10.17□□□□□ -0.78
CHCHD3-203ENST00000448878 ZNF706Q9Y5V0 76 aaPredicted RBP10.16□□□□□ -0.78
CHCHD3-203ENST00000448878 PMVKQ15126 192 aa10.15□□□□□ -0.78
CHCHD3-203ENST00000448878 RHEBQ15382 184 aa10.14□□□□□ -0.79
CHCHD3-203ENST00000448878 NDUFA6P56556 154 aa10.13□□□□□ -0.79
CHCHD3-203ENST00000448878 NDUFA12Q9UI09 145 aa10.13□□□□□ -0.79
CHCHD3-203ENST00000448878 LINC01549A6NIU2 74 aa10.12□□□□□ -0.79
CHCHD3-203ENST00000448878 SPINK1P00995 79 aa10.12□□□□□ -0.79
CHCHD3-203ENST00000448878 COX17Q14061 63 aa10.12□□□□□ -0.79
CHCHD3-203ENST00000448878 Q8NDZ9 215 aa10.12□□□□□ -0.79
CHCHD3-203ENST00000448878 RPS10P5Q9NQ39 176 aa10.11□□□□□ -0.79
CHCHD3-203ENST00000448878 LINC00158P58513 81 aa10.08□□□□□ -0.8
CHCHD3-203ENST00000448878 SMCR5Q8TEV8 140 aa10.08□□□□□ -0.8
CHCHD3-203ENST00000448878 SMCO4Q9NRQ5 59 aa10.08□□□□□ -0.8
CHCHD3-203ENST00000448878 IGLV5-39A0A0G2JS06 123 aa10.07□□□□□ -0.8
CHCHD3-203ENST00000448878 A0A0U1RRA0 63 aa10.07□□□□□ -0.8
CHCHD3-203ENST00000448878 FA2HQ7L5A8 372 aa10.07□□□□□ -0.8
CHCHD3-203ENST00000448878 IGLC3P0DOY3 106 aa10.06□□□□□ -0.8
CHCHD3-203ENST00000448878 IGLV9-49A0A0B4J1Y8 123 aa10.05□□□□□ -0.8
CHCHD3-203ENST00000448878 ZNF22P17026 224 aaPredicted RBP10.05□□□□□ -0.8
CHCHD3-203ENST00000448878 S100PP25815 95 aa10.04□□□□□ -0.8
CHCHD3-203ENST00000448878 GAGE2AQ6NT46 116 aa10.04□□□□□ -0.8
CHCHD3-203ENST00000448878 FAM19A2Q8N3H0 131 aa10.04□□□□□ -0.8
CHCHD3-203ENST00000448878 ETDCA0A1B0GVM5 59 aa10.03□□□□□ -0.8
CHCHD3-203ENST00000448878 MOBPQ13875 183 aa10.03□□□□□ -0.8
CHCHD3-203ENST00000448878 LINC01546A6NGU7 62 aa10.02□□□□□ -0.81
CHCHD3-203ENST00000448878 PRYO14603 147 aa10.02□□□□□ -0.81
CHCHD3-203ENST00000448878 TMEM170BQ5T4T1 132 aa10.02□□□□□ -0.81
CHCHD3-203ENST00000448878 NCR3O14931 201 aa10.01□□□□□ -0.81
CHCHD3-203ENST00000448878 SFTA2Q6UW10 78 aa10.01□□□□□ -0.81
CHCHD3-203ENST00000448878 Q8N377 158 aa10.01□□□□□ -0.81
CHCHD3-203ENST00000448878 SLC25A20O43772 301 aa9.99□□□□□ -0.81
CHCHD3-203ENST00000448878 XP32Q5T750 250 aa9.99□□□□□ -0.81
CHCHD3-203ENST00000448878 LCE2CQ5TA81 110 aa9.98□□□□□ -0.81
CHCHD3-203ENST00000448878 BOD1L2Q8IYS8 172 aa9.98□□□□□ -0.81
CHCHD3-203ENST00000448878 TRAV9-1A0A075B6T8 112 aa9.97□□□□□ -0.81
CHCHD3-203ENST00000448878 SSBP3-AS1Q7Z2R9 100 aa9.97□□□□□ -0.81
CHCHD3-203ENST00000448878 C11orf86A6NJI1 115 aa9.96□□□□□ -0.82
CHCHD3-203ENST00000448878 RPS29P62273 56 aaKnown RBP9.96□□□□□ -0.82
CHCHD3-203ENST00000448878 S100A12P80511 92 aa9.96□□□□□ -0.82
CHCHD3-203ENST00000448878 FABP9Q0Z7S8 132 aa9.96□□□□□ -0.82
CHCHD3-203ENST00000448878 LINC00483Q53H64 154 aa9.96□□□□□ -0.82
CHCHD3-203ENST00000448878 BAGE3Q86Y29 109 aa9.96□□□□□ -0.82
CHCHD3-203ENST00000448878 KCNQ1DNQ9H478 68 aa9.95□□□□□ -0.82
CHCHD3-203ENST00000448878 CFC1BP0CG36 223 aa9.94□□□□□ -0.82
CHCHD3-203ENST00000448878 SMIM13P0DJ93 91 aa9.94□□□□□ -0.82
CHCHD3-203ENST00000448878 SPRR1AP35321 89 aa9.94□□□□□ -0.82
CHCHD3-203ENST00000448878 MEIG1Q5JSS6 88 aa9.94□□□□□ -0.82
CHCHD3-203ENST00000448878 MT1HP80294 61 aa9.93□□□□□ -0.82
CHCHD3-203ENST00000448878 TRBV10-3A0A0K0K1G6 114 aa9.92□□□□□ -0.82
CHCHD3-203ENST00000448878 KRTAP4-16G5E9R7 235 aaPredicted RBP9.92□□□□□ -0.82
CHCHD3-203ENST00000448878 ERC2-IT1O76042 136 aa9.92□□□□□ -0.82
CHCHD3-203ENST00000448878 PMCHL1Q16048 86 aa9.92□□□□□ -0.82
CHCHD3-203ENST00000448878 C9orf153Q5TBE3 101 aa9.92□□□□□ -0.82
CHCHD3-203ENST00000448878 IGLV8-61A0A075B6I0 122 aa9.91□□□□□ -0.82
CHCHD3-203ENST00000448878 A0A096LNJ9 63 aa9.91□□□□□ -0.82
CHCHD3-203ENST00000448878 HBDP02042 147 aa9.91□□□□□ -0.82
CHCHD3-203ENST00000448878 COX19Q49B96 90 aa9.91□□□□□ -0.82
CHCHD3-203ENST00000448878 MIR7-3HGQ8N6C7 128 aa9.91□□□□□ -0.82
CHCHD3-203ENST00000448878 YPEL4Q96NS1 127 aa9.91□□□□□ -0.82
CHCHD3-203ENST00000448878 COLCA2A8K830 154 aa9.9□□□□□ -0.82
CHCHD3-203ENST00000448878 PCOTHQ58A44 107 aa9.9□□□□□ -0.82
CHCHD3-203ENST00000448878 B5MCH6 92 aa9.89□□□□□ -0.83
CHCHD3-203ENST00000448878 LINC00614P0C842 121 aa9.89□□□□□ -0.83
CHCHD3-203ENST00000448878 CHTOPQ9Y3Y2 248 aaKnown RBP9.89□□□□□ -0.83
CHCHD3-203ENST00000448878 KRTAP19-2Q3LHN2 52 aa9.87□□□□□ -0.83
CHCHD3-203ENST00000448878 TMEM223A0PJW6 202 aa9.86□□□□□ -0.83
CHCHD3-203ENST00000448878 C9orf92A6NGG3 77 aa9.85□□□□□ -0.83
CHCHD3-203ENST00000448878 M0R2T5 61 aa9.85□□□□□ -0.83
CHCHD3-203ENST00000448878 URB1-AS1Q96HZ7 61 aa9.85□□□□□ -0.83
CHCHD3-203ENST00000448878 DDTP30046 118 aa9.84□□□□□ -0.83
CHCHD3-203ENST00000448878 Q9BRP9 147 aa9.84□□□□□ -0.83
CHCHD3-203ENST00000448878 TRAPPC1Q9Y5R8 145 aa9.84□□□□□ -0.83
CHCHD3-203ENST00000448878 LINC00587B1AMM8 73 aa9.83□□□□□ -0.84
CHCHD3-203ENST00000448878 HERV-K104P63124 156 aa9.83□□□□□ -0.84
CHCHD3-203ENST00000448878 C18orf32Q8TCD1 76 aa9.83□□□□□ -0.84
CHCHD3-203ENST00000448878 MAP1LC3CQ9BXW4 147 aa9.83□□□□□ -0.84
CHCHD3-203ENST00000448878 LORP23490 312 aaPredicted RBP9.81□□□□□ -0.84
CHCHD3-203ENST00000448878 KRTAP10-6P60371 365 aaPredicted RBP9.81□□□□□ -0.84
CHCHD3-203ENST00000448878 HRCT1Q6UXD1 115 aa9.81□□□□□ -0.84
CHCHD3-203ENST00000448878 Q6ZRX8 168 aa9.81□□□□□ -0.84
CHCHD3-203ENST00000448878 TRGC2P03986 189 aa9.79□□□□□ -0.84
CHCHD3-203ENST00000448878 S100A7L2Q5SY68 101 aa9.79□□□□□ -0.84
CHCHD3-203ENST00000448878 MYMXA0A1B0GTQ4 84 aa9.78□□□□□ -0.84
CHCHD3-203ENST00000448878 JOSD1Q15040 202 aaPredicted RBP9.78□□□□□ -0.84
CHCHD3-203ENST00000448878 LIMD2Q9BT23 127 aa9.77□□□□□ -0.85
CHCHD3-203ENST00000448878 ST20-AS1Q8NBB2 130 aa9.76□□□□□ -0.85
CHCHD3-203ENST00000448878 TRBV10-2A0A0K0K1G8 114 aa9.75□□□□□ -0.85
CHCHD3-203ENST00000448878 COX6B2Q6YFQ2 88 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms