RNA–Protein interactions for RNA: ENST00000448611.6

LMNA-208, Transcript of lamin A/C, human

TSL 2 BASIC

Gene LMNA, Length 1,943 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMNA-208	ENST00000448611	TRBV10-2	A0A0K0K1G8	114 aa		11.69	□□□□□ -0.54
LMNA-208	ENST00000448611		F8WDY8	70 aa		11.69	□□□□□ -0.54
LMNA-208	ENST00000448611	DNAH1	Q9P2D7	4330 aa		11.69	□□□□□ -0.54
LMNA-208	ENST00000448611	ANKRD29	Q8N6D5	301 aa		11.68	□□□□□ -0.54
LMNA-208	ENST00000448611	DYNC2H1	Q8NCM8	4307 aa	Known RBP	11.68	□□□□□ -0.54
LMNA-208	ENST00000448611	TEN1	Q86WV5	123 aa		11.67	□□□□□ -0.54
LMNA-208	ENST00000448611	RMI2	Q96E14	147 aa		11.67	□□□□□ -0.54
LMNA-208	ENST00000448611	CASC10	Q5T4H9	136 aa		11.66	□□□□□ -0.54
LMNA-208	ENST00000448611	FAM218A	Q96MZ4	157 aa		11.66	□□□□□ -0.54
LMNA-208	ENST00000448611	NCR3	O14931	201 aa		11.65	□□□□□ -0.54
LMNA-208	ENST00000448611	SYCN	Q0VAF6	134 aa		11.64	□□□□□ -0.55
LMNA-208	ENST00000448611	RNF151	Q2KHN1	245 aa		11.64	□□□□□ -0.55
LMNA-208	ENST00000448611	TMEM126A	Q9H061	195 aa		11.64	□□□□□ -0.55
LMNA-208	ENST00000448611	TRAC	P01848	142 aa		11.64	□□□□□ -0.55
LMNA-208	ENST00000448611	KRTAP1-5	Q9BYS1	174 aa		11.64	□□□□□ -0.55
LMNA-208	ENST00000448611	XAGE1A	Q9HD64	81 aa		11.64	□□□□□ -0.55
LMNA-208	ENST00000448611	NUPR2	A6NF83	97 aa		11.63	□□□□□ -0.55
LMNA-208	ENST00000448611	USP17L23	D6RBM5	183 aa		11.63	□□□□□ -0.55
LMNA-208	ENST00000448611		H3BT86	120 aa		11.63	□□□□□ -0.55
LMNA-208	ENST00000448611	NDUFC2-KCTD14	E9PQ53	114 aa		11.62	□□□□□ -0.55
LMNA-208	ENST00000448611		H0YGX0	51 aa		11.62	□□□□□ -0.55
LMNA-208	ENST00000448611	UBE2DNL	Q8IWF7	75 aa		11.62	□□□□□ -0.55
LMNA-208	ENST00000448611	CARD19	Q96LW7	228 aa		11.62	□□□□□ -0.55
LMNA-208	ENST00000448611	PPDPFL	Q8WWR9	84 aa		11.61	□□□□□ -0.55
LMNA-208	ENST00000448611		J3QR89	54 aa		11.6	□□□□□ -0.55
LMNA-208	ENST00000448611	SLPI	P03973	132 aa		11.6	□□□□□ -0.55
LMNA-208	ENST00000448611	S100A7L2	Q5SY68	101 aa		11.59	□□□□□ -0.55
LMNA-208	ENST00000448611		Q6ZRP5	223 aa		11.59	□□□□□ -0.55
LMNA-208	ENST00000448611		A0A087WYN8	130 aa		11.58	□□□□□ -0.55
LMNA-208	ENST00000448611	RPL18A	Q02543	176 aa	Known RBP	11.58	□□□□□ -0.55
LMNA-208	ENST00000448611	CSMD3	Q7Z407	3707 aa		11.58	□□□□□ -0.56
LMNA-208	ENST00000448611	IGLV6-57	P01721	117 aa		11.58	□□□□□ -0.56
LMNA-208	ENST00000448611	LYST	Q99698	3801 aa		11.57	□□□□□ -0.56
LMNA-208	ENST00000448611	VPREB1	P12018	145 aa		11.56	□□□□□ -0.56
LMNA-208	ENST00000448611	GAGE2E	Q4V326	116 aa		11.56	□□□□□ -0.56
LMNA-208	ENST00000448611	WWC2-AS2	Q96NR7	200 aa		11.56	□□□□□ -0.56
LMNA-208	ENST00000448611	VPS25	Q9BRG1	176 aa		11.56	□□□□□ -0.56
LMNA-208	ENST00000448611	GAGE2D	Q9UEU5	116 aa		11.56	□□□□□ -0.56
LMNA-208	ENST00000448611	TLX1NB	P0CAT3	122 aa		11.55	□□□□□ -0.56
LMNA-208	ENST00000448611	LECT2	O14960	151 aa		11.54	□□□□□ -0.56
LMNA-208	ENST00000448611	TEX49	A0A1B0GTD5	131 aa		11.54	□□□□□ -0.56
LMNA-208	ENST00000448611	C6orf99	Q4VX62	202 aa		11.53	□□□□□ -0.56
LMNA-208	ENST00000448611	C9orf129	Q5T035	196 aa	Known RBP	11.53	□□□□□ -0.56
LMNA-208	ENST00000448611	PLEC	Q15149	4684 aa	Known RBP	11.53	□□□□□ -0.56
LMNA-208	ENST00000448611	DNAH7	Q8WXX0	4024 aa		11.52	□□□□□ -0.56
LMNA-208	ENST00000448611	TRBV10-3	A0A0K0K1G6	114 aa		11.52	□□□□□ -0.56
LMNA-208	ENST00000448611	BAALC-AS2	P0C853	105 aa		11.52	□□□□□ -0.57
LMNA-208	ENST00000448611	DNAL4	O96015	105 aa		11.51	□□□□□ -0.57
LMNA-208	ENST00000448611	C22orf24	Q9Y442	160 aa		11.51	□□□□□ -0.57
LMNA-208	ENST00000448611		M0R378	163 aa		11.5	□□□□□ -0.57
LMNA-208	ENST00000448611	STARD9	Q9P2P6	4700 aa		11.49	□□□□□ -0.57
LMNA-208	ENST00000448611	NBDY	A0A0U1RRE5	68 aa		11.48	□□□□□ -0.57
LMNA-208	ENST00000448611		A0A1B0GX51	115 aa		11.48	□□□□□ -0.57
LMNA-208	ENST00000448611	TRAV23DV6	A0A075B6W5	121 aa		11.48	□□□□□ -0.57
LMNA-208	ENST00000448611	PSCA	O43653	123 aa		11.47	□□□□□ -0.57
LMNA-208	ENST00000448611	TTC32	Q5I0X7	151 aa		11.47	□□□□□ -0.57
LMNA-208	ENST00000448611		Q8N814	137 aa		11.47	□□□□□ -0.57
LMNA-208	ENST00000448611	LINC00167	Q96N53	147 aa		11.47	□□□□□ -0.57
LMNA-208	ENST00000448611	CBY1	Q9Y3M2	126 aa		11.46	□□□□□ -0.58
LMNA-208	ENST00000448611	SERTAD4-AS1	Q5TG53	156 aa		11.45	□□□□□ -0.58
LMNA-208	ENST00000448611	LINC00575	Q6W349	94 aa		11.45	□□□□□ -0.58
LMNA-208	ENST00000448611	PLA2G2D	Q9UNK4	145 aa		11.45	□□□□□ -0.58
LMNA-208	ENST00000448611	DNAH10	Q8IVF4	4471 aa		11.44	□□□□□ -0.58
LMNA-208	ENST00000448611	ZNF73	O43830	326 aa	Predicted RBP	11.44	□□□□□ -0.58
LMNA-208	ENST00000448611	DIRC1	Q969H9	104 aa		11.44	□□□□□ -0.58
LMNA-208	ENST00000448611	TENM2	Q9NT68	2774 aa		11.43	□□□□□ -0.58
LMNA-208	ENST00000448611	CNBP	P62633	177 aa	Known RBP	11.43	□□□□□ -0.58
LMNA-208	ENST00000448611	LOC107984640	A0A0U1RRK4	108 aa		11.43	□□□□□ -0.58
LMNA-208	ENST00000448611	ORMDL1	Q9P0S3	153 aa		11.43	□□□□□ -0.58
LMNA-208	ENST00000448611	CDIP1	Q9H305	208 aa		11.42	□□□□□ -0.58
LMNA-208	ENST00000448611	GAGE2B	Q13066	116 aa		11.41	□□□□□ -0.58
LMNA-208	ENST00000448611	NKAPP1	Q8N9T2	125 aa		11.41	□□□□□ -0.58
LMNA-208	ENST00000448611	IGLV5-37	A0A075B6J1	123 aa		11.41	□□□□□ -0.58
LMNA-208	ENST00000448611	C3orf84	H3BNL1	204 aa		11.41	□□□□□ -0.58
LMNA-208	ENST00000448611		Q6ZRN7	208 aa	Predicted RBP	11.41	□□□□□ -0.58
LMNA-208	ENST00000448611	C7orf33	Q8WU49	177 aa		11.41	□□□□□ -0.58
LMNA-208	ENST00000448611	VPS13D	Q5THJ4	4388 aa		11.4	□□□□□ -0.58
LMNA-208	ENST00000448611	TRBV7-6	A0A0J9YX20	115 aa		11.4	□□□□□ -0.58
LMNA-208	ENST00000448611	FAM168B	A1KXE4	195 aa		11.4	□□□□□ -0.58
LMNA-208	ENST00000448611	C14orf177	Q52M58	125 aa		11.4	□□□□□ -0.58
LMNA-208	ENST00000448611	hADV29S1	A0JD25	119 aa		11.39	□□□□□ -0.59
LMNA-208	ENST00000448611	SNCG	O76070	127 aa		11.39	□□□□□ -0.59
LMNA-208	ENST00000448611	KRTAP7-1	Q8IUC3	87 aa		11.39	□□□□□ -0.59
LMNA-208	ENST00000448611	LRCOL1	A6NCL2	159 aa		11.39	□□□□□ -0.59
LMNA-208	ENST00000448611	ELOF1	P60002	83 aa	Known RBP	11.39	□□□□□ -0.59
LMNA-208	ENST00000448611	COX7B	P24311	80 aa		11.37	□□□□□ -0.59
LMNA-208	ENST00000448611	OBSCN-AS1	Q96MR7	158 aa		11.37	□□□□□ -0.59
LMNA-208	ENST00000448611	KCNQ1DN	Q9H478	68 aa		11.37	□□□□□ -0.59
LMNA-208	ENST00000448611	IGLV2-33	A0A075B6J2	118 aa	Predicted RBP	11.35	□□□□□ -0.59
LMNA-208	ENST00000448611	INAFM2	P0DMQ5	153 aa		11.35	□□□□□ -0.59
LMNA-208	ENST00000448611	FAM240A	A0A1B0GVK7	77 aa		11.34	□□□□□ -0.59
LMNA-208	ENST00000448611	TMEM256-PLSCR3	K7ERE1	68 aa		11.34	□□□□□ -0.59
LMNA-208	ENST00000448611		M0R2N4	97 aa		11.34	□□□□□ -0.59
LMNA-208	ENST00000448611		A0A096LNI7	61 aa		11.33	□□□□□ -0.6
LMNA-208	ENST00000448611	C16orf90	A8MZG2	172 aa		11.33	□□□□□ -0.6
LMNA-208	ENST00000448611	LINC00528	Q8N1L1	170 aa		11.33	□□□□□ -0.6
LMNA-208	ENST00000448611	SIGMAR1	Q99720	223 aa		11.33	□□□□□ -0.6
LMNA-208	ENST00000448611	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	11.33	□□□□□ -0.6
LMNA-208	ENST00000448611	IGLV1-50	A0A075B6I6	118 aa		11.32	□□□□□ -0.6
LMNA-208	ENST00000448611		Q6ZQY7	126 aa		11.31	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 108.1 ms