RNA–Protein interactions for RNA: ENST00000448549.1

TRA2A-203, Transcript of transformer 2 alpha homolog, humanhuman

TSL 4

Gene TRA2A, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-203ENST00000448549 A0A096LNJ9 63 aa8.92□□□□□ -0.98
TRA2A-203ENST00000448549 CTAG1AP78358 180 aa8.92□□□□□ -0.98
TRA2A-203ENST00000448549 UQCC3Q6UW78 93 aa8.92□□□□□ -0.98
TRA2A-203ENST00000448549 COX19Q49B96 90 aa8.91□□□□□ -0.98
TRA2A-203ENST00000448549 HIGD2AQ9BW72 106 aa8.91□□□□□ -0.98
TRA2A-203ENST00000448549 PPDPFQ9H3Y8 114 aa8.9□□□□□ -0.98
TRA2A-203ENST00000448549 PMCHL1Q16048 86 aa8.89□□□□□ -0.99
TRA2A-203ENST00000448549 URB1-AS1Q96HZ7 61 aa8.89□□□□□ -0.99
TRA2A-203ENST00000448549 SEC11CQ9BY50 192 aa8.89□□□□□ -0.99
TRA2A-203ENST00000448549 MUC17Q685J3 4493 aa8.88□□□□□ -0.99
TRA2A-203ENST00000448549 C11orf86A6NJI1 115 aa8.88□□□□□ -0.99
TRA2A-203ENST00000448549 TMEM170BQ5T4T1 132 aa8.88□□□□□ -0.99
TRA2A-203ENST00000448549 BAGE3Q86Y29 109 aa8.88□□□□□ -0.99
TRA2A-203ENST00000448549 HBDP02042 147 aa8.87□□□□□ -0.99
TRA2A-203ENST00000448549 LINC00614P0C842 121 aa8.87□□□□□ -0.99
TRA2A-203ENST00000448549 SPRR4Q96PI1 79 aa8.87□□□□□ -0.99
TRA2A-203ENST00000448549 LINC00158P58513 81 aa8.86□□□□□ -0.99
TRA2A-203ENST00000448549 SPAG11AQ6PDA7 123 aa8.86□□□□□ -0.99
TRA2A-203ENST00000448549 SFTA2Q6UW10 78 aa8.86□□□□□ -0.99
TRA2A-203ENST00000448549 C18orf32Q8TCD1 76 aa8.86□□□□□ -0.99
TRA2A-203ENST00000448549 A0A0U1RRA0 63 aa8.85□□□□□ -0.99
TRA2A-203ENST00000448549 RPS10P5Q9NQ39 176 aa8.84□□□□□ -0.99
TRA2A-203ENST00000448549 DAND5Q8N907 189 aa8.83□□□□□ -1
TRA2A-203ENST00000448549 TRAPPC1Q9Y5R8 145 aa8.83□□□□□ -1
TRA2A-203ENST00000448549 IFITM2Q01629 132 aa8.82□□□□□ -1
TRA2A-203ENST00000448549 FP248Q71RG6 208 aaPredicted RBP8.82□□□□□ -1
TRA2A-203ENST00000448549 CHTOPQ9Y3Y2 248 aaKnown RBP8.82□□□□□ -1
TRA2A-203ENST00000448549 ZNF706Q9Y5V0 76 aaPredicted RBP8.82□□□□□ -1
TRA2A-203ENST00000448549 RHEBQ15382 184 aa8.81□□□□□ -1
TRA2A-203ENST00000448549 Q8NBF4 154 aa8.81□□□□□ -1
TRA2A-203ENST00000448549 KRTAP9-6A0A140TA67 174 aa8.8□□□□□ -1
TRA2A-203ENST00000448549 SMIM13P0DJ93 91 aa8.8□□□□□ -1
TRA2A-203ENST00000448549 C10orf91Q5T1B1 145 aa8.8□□□□□ -1
TRA2A-203ENST00000448549 COMMD7Q86VX2 200 aa8.8□□□□□ -1
TRA2A-203ENST00000448549 BOD1L2Q8IYS8 172 aa8.8□□□□□ -1
TRA2A-203ENST00000448549 LINC00337Q8N6G1 96 aa8.8□□□□□ -1
TRA2A-203ENST00000448549 TMEM223A0PJW6 202 aa8.79□□□□□ -1
TRA2A-203ENST00000448549 PRYO14603 147 aa8.79□□□□□ -1
TRA2A-203ENST00000448549 ATP6V1G1O75348 118 aa8.79□□□□□ -1
TRA2A-203ENST00000448549 KRTAP13-3Q3SY46 172 aa8.79□□□□□ -1
TRA2A-203ENST00000448549 SMCR5Q8TEV8 140 aa8.79□□□□□ -1
TRA2A-203ENST00000448549 NCR3O14931 201 aa8.78□□□□□ -1
TRA2A-203ENST00000448549 LCE2CQ5TA81 110 aa8.78□□□□□ -1
TRA2A-203ENST00000448549 SPRR1AP35321 89 aa8.77□□□□□ -1.01
TRA2A-203ENST00000448549 MIR7-3HGQ8N6C7 128 aa8.77□□□□□ -1.01
TRA2A-203ENST00000448549 KCNQ1DNQ9H478 68 aa8.77□□□□□ -1.01
TRA2A-203ENST00000448549 KRTAP4-16G5E9R7 235 aaPredicted RBP8.76□□□□□ -1.01
TRA2A-203ENST00000448549 MEIG1Q5JSS6 88 aa8.76□□□□□ -1.01
TRA2A-203ENST00000448549 ETDCA0A1B0GVM5 59 aa8.75□□□□□ -1.01
TRA2A-203ENST00000448549 SPINK1P00995 79 aa8.75□□□□□ -1.01
TRA2A-203ENST00000448549 ASB16-AS1Q495Z4 193 aa8.75□□□□□ -1.01
TRA2A-203ENST00000448549 TRAV12-1A0A0B4J245 112 aa8.74□□□□□ -1.01
TRA2A-203ENST00000448549 TRBV10-3A0A0K0K1G6 114 aa8.74□□□□□ -1.01
TRA2A-203ENST00000448549 GHRHP01286 108 aa8.73□□□□□ -1.01
TRA2A-203ENST00000448549 LINC00483Q53H64 154 aa8.73□□□□□ -1.01
TRA2A-203ENST00000448549 GAGE2AQ6NT46 116 aa8.73□□□□□ -1.01
TRA2A-203ENST00000448549 IFI27L1Q96BM0 104 aa8.73□□□□□ -1.01
TRA2A-203ENST00000448549 HERV-K104P63124 156 aa8.72□□□□□ -1.01
TRA2A-203ENST00000448549 KRTAP4-1Q9BYQ7 146 aa8.72□□□□□ -1.01
TRA2A-203ENST00000448549 NDUFA12Q9UI09 145 aa8.71□□□□□ -1.02
TRA2A-203ENST00000448549 IGLV9-49A0A0B4J1Y8 123 aa8.7□□□□□ -1.02
TRA2A-203ENST00000448549 LINC00587B1AMM8 73 aa8.7□□□□□ -1.02
TRA2A-203ENST00000448549 B5MCH6 92 aa8.7□□□□□ -1.02
TRA2A-203ENST00000448549 ERC2-IT1O76042 136 aa8.7□□□□□ -1.02
TRA2A-203ENST00000448549 MOBPQ13875 183 aa8.7□□□□□ -1.02
TRA2A-203ENST00000448549 CHCHD1Q96BP2 118 aaKnown RBP8.7□□□□□ -1.02
TRA2A-203ENST00000448549 LINC01547P58512 204 aaPredicted RBP8.69□□□□□ -1.02
TRA2A-203ENST00000448549 SEC61BP60468 96 aaKnown RBP8.69□□□□□ -1.02
TRA2A-203ENST00000448549 S100A12P80511 92 aa8.69□□□□□ -1.02
TRA2A-203ENST00000448549 MAP1LC3CQ9BXW4 147 aa8.69□□□□□ -1.02
TRA2A-203ENST00000448549 MYMXA0A1B0GTQ4 84 aa8.68□□□□□ -1.02
TRA2A-203ENST00000448549 APOC3P02656 99 aa8.68□□□□□ -1.02
TRA2A-203ENST00000448549 Q8N377 158 aa8.68□□□□□ -1.02
TRA2A-203ENST00000448549 SSBP3-AS1Q7Z2R9 100 aa8.67□□□□□ -1.02
TRA2A-203ENST00000448549 DDTP30046 118 aa8.66□□□□□ -1.02
TRA2A-203ENST00000448549 RPS29P62273 56 aaKnown RBP8.66□□□□□ -1.02
TRA2A-203ENST00000448549 FAM19A2Q8N3H0 131 aa8.66□□□□□ -1.02
TRA2A-203ENST00000448549 Q9BRP9 147 aa8.66□□□□□ -1.02
TRA2A-203ENST00000448549 H0Y8G0 127 aa8.65□□□□□ -1.02
TRA2A-203ENST00000448549 SNAPINO95295 136 aa8.65□□□□□ -1.02
TRA2A-203ENST00000448549 TSPEAR-AS2P59090 65 aa8.65□□□□□ -1.02
TRA2A-203ENST00000448549 LOC107984156A0A0G2JMH3 177 aa8.64□□□□□ -1.03
TRA2A-203ENST00000448549 TRBV10-2A0A0K0K1G8 114 aa8.64□□□□□ -1.03
TRA2A-203ENST00000448549 SLC25A20O43772 301 aa8.64□□□□□ -1.03
TRA2A-203ENST00000448549 HSBP1O75506 76 aa8.64□□□□□ -1.03
TRA2A-203ENST00000448549 Q6ZRX8 168 aa8.64□□□□□ -1.03
TRA2A-203ENST00000448549 ARL17AQ8IVW1 177 aa8.64□□□□□ -1.03
TRA2A-203ENST00000448549 SVBPQ8N300 66 aa8.63□□□□□ -1.03
TRA2A-203ENST00000448549 YPEL4Q96NS1 127 aa8.63□□□□□ -1.03
TRA2A-203ENST00000448549 LEPROTO15243 131 aa8.62□□□□□ -1.03
TRA2A-203ENST00000448549 NDUFA5Q16718 116 aa8.61□□□□□ -1.03
TRA2A-203ENST00000448549 SPANXB1Q9NS25 103 aaPredicted RBP8.61□□□□□ -1.03
TRA2A-203ENST00000448549 IGLV6-57P01721 117 aa8.6□□□□□ -1.03
TRA2A-203ENST00000448549 S100A7L2Q5SY68 101 aa8.6□□□□□ -1.03
TRA2A-203ENST00000448549 XP32Q5T750 250 aa8.6□□□□□ -1.03
TRA2A-203ENST00000448549 MIEN1Q9BRT3 115 aa8.6□□□□□ -1.03
TRA2A-203ENST00000448549 J3QQQ9 107 aa8.59□□□□□ -1.03
TRA2A-203ENST00000448549 C9orf153Q5TBE3 101 aa8.59□□□□□ -1.03
TRA2A-203ENST00000448549 LEPROTL1O95214 131 aa8.58□□□□□ -1.04
TRA2A-203ENST00000448549 TRAV23DV6A0A075B6W5 121 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms