RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 PLA2G2DQ9UNK4 145 aa8.83□□□□□ -1
SSBP3-208ENST00000444533 ZNF815PA8K554 130 aa8.82□□□□□ -1
SSBP3-208ENST00000444533 TMA7Q9Y2S6 64 aaKnown RBP8.82□□□□□ -1
SSBP3-208ENST00000444533 C22orf24Q9Y442 160 aa8.82□□□□□ -1
SSBP3-208ENST00000444533 DNAH8Q96JB1 4490 aa8.82□□□□□ -1
SSBP3-208ENST00000444533 SERTAD4-AS1Q5TG53 156 aa8.81□□□□□ -1
SSBP3-208ENST00000444533 MRPL55Q7Z7F7 128 aaKnown RBP8.81□□□□□ -1
SSBP3-208ENST00000444533 MIR7-3HGQ8N6C7 128 aa8.81□□□□□ -1
SSBP3-208ENST00000444533 HERC2O95714 4834 aa8.8□□□□□ -1
SSBP3-208ENST00000444533 PRR3P79522 188 aaKnown RBP8.8□□□□□ -1
SSBP3-208ENST00000444533 SCGB1D4Q6XE38 83 aa8.8□□□□□ -1
SSBP3-208ENST00000444533 IGLV5-37A0A075B6J1 123 aa8.78□□□□□ -1
SSBP3-208ENST00000444533 A0A0J9YXY3 114 aa8.78□□□□□ -1
SSBP3-208ENST00000444533 C1orf137Q5JT78 98 aa8.78□□□□□ -1
SSBP3-208ENST00000444533 BOD1L2Q8IYS8 172 aa8.78□□□□□ -1
SSBP3-208ENST00000444533 KRTAP4-5Q9BYR2 181 aa8.78□□□□□ -1
SSBP3-208ENST00000444533 PSORS1C2Q9UIG4 136 aa8.77□□□□□ -1.01
SSBP3-208ENST00000444533 IGKV2D-26A0A0A0MRZ7 120 aa8.76□□□□□ -1.01
SSBP3-208ENST00000444533 LCE2BO14633 110 aa8.76□□□□□ -1.01
SSBP3-208ENST00000444533 TIMM17BO60830 172 aa8.76□□□□□ -1.01
SSBP3-208ENST00000444533 S100A12P80511 92 aa8.76□□□□□ -1.01
SSBP3-208ENST00000444533 ANKRD39Q53RE8 183 aa8.76□□□□□ -1.01
SSBP3-208ENST00000444533 COPS9Q8WXC6 57 aa8.76□□□□□ -1.01
SSBP3-208ENST00000444533 KRTAP17-1Q9BYP8 105 aa8.76□□□□□ -1.01
SSBP3-208ENST00000444533 GAGE10A6NGK3 116 aa8.75□□□□□ -1.01
SSBP3-208ENST00000444533 TMEM238C9JI98 176 aa8.75□□□□□ -1.01
SSBP3-208ENST00000444533 VPREB1P12018 145 aa8.75□□□□□ -1.01
SSBP3-208ENST00000444533 KRTAP7-1Q8IUC3 87 aa8.75□□□□□ -1.01
SSBP3-208ENST00000444533 DAND5Q8N907 189 aa8.75□□□□□ -1.01
SSBP3-208ENST00000444533 LINC00167Q96N53 147 aa8.75□□□□□ -1.01
SSBP3-208ENST00000444533 RPL37AP8A6NKH3 93 aa8.74□□□□□ -1.01
SSBP3-208ENST00000444533 M0R378 163 aa8.74□□□□□ -1.01
SSBP3-208ENST00000444533 KRTAP10-4P60372 401 aaPredicted RBP8.72□□□□□ -1.01
SSBP3-208ENST00000444533 TTTY13Q9BZ97 58 aa8.72□□□□□ -1.01
SSBP3-208ENST00000444533 IGKV2-28A0A075B6P5 120 aa8.71□□□□□ -1.02
SSBP3-208ENST00000444533 LOC107984156A0A0G2JMH3 177 aa8.71□□□□□ -1.02
SSBP3-208ENST00000444533 IGKV2D-28P01615 120 aa8.71□□□□□ -1.02
SSBP3-208ENST00000444533 NPC2P61916 151 aa8.71□□□□□ -1.02
SSBP3-208ENST00000444533 SPINK6Q6UWN8 80 aa8.71□□□□□ -1.02
SSBP3-208ENST00000444533 ARL17AQ8IVW1 177 aa8.71□□□□□ -1.02
SSBP3-208ENST00000444533 FAT1Q14517 4588 aa8.7□□□□□ -1.02
SSBP3-208ENST00000444533 SRRM2Q9UQ35 2752 aaKnown RBP8.7□□□□□ -1.02
SSBP3-208ENST00000444533 NCR3O14931 201 aa8.7□□□□□ -1.02
SSBP3-208ENST00000444533 NDUFC2O95298 119 aa8.7□□□□□ -1.02
SSBP3-208ENST00000444533 IGLV7-43P04211 117 aa8.7□□□□□ -1.02
SSBP3-208ENST00000444533 JOSD1Q15040 202 aaPredicted RBP8.7□□□□□ -1.02
SSBP3-208ENST00000444533 Q6ZVH6 145 aa8.7□□□□□ -1.02
SSBP3-208ENST00000444533 PCP2Q8IVA1 136 aa8.7□□□□□ -1.02
SSBP3-208ENST00000444533 VAMP8Q9BV40 100 aa8.7□□□□□ -1.02
SSBP3-208ENST00000444533 SPANXB1Q9NS25 103 aaPredicted RBP8.7□□□□□ -1.02
SSBP3-208ENST00000444533 IGLV1-50A0A075B6I6 118 aa8.69□□□□□ -1.02
SSBP3-208ENST00000444533 S100A7L2Q5SY68 101 aa8.69□□□□□ -1.02
SSBP3-208ENST00000444533 ADAMTSL4-AS1Q5T5F5 129 aa8.69□□□□□ -1.02
SSBP3-208ENST00000444533 REG3GQ6UW15 175 aa8.69□□□□□ -1.02
SSBP3-208ENST00000444533 DIRC1Q969H9 104 aa8.69□□□□□ -1.02
SSBP3-208ENST00000444533 CBY1Q9Y3M2 126 aa8.69□□□□□ -1.02
SSBP3-208ENST00000444533 TRBV10-2A0A0K0K1G8 114 aa8.68□□□□□ -1.02
SSBP3-208ENST00000444533 BCE1O60756 84 aa8.68□□□□□ -1.02
SSBP3-208ENST00000444533 RPL28P46779 137 aaKnown RBP8.68□□□□□ -1.02
SSBP3-208ENST00000444533 UBE2AP49459 152 aa8.68□□□□□ -1.02
SSBP3-208ENST00000444533 LINC00308Q8TCZ7 52 aa8.68□□□□□ -1.02
SSBP3-208ENST00000444533 SPANXDQ9BXN6 97 aa8.68□□□□□ -1.02
SSBP3-208ENST00000444533 SPANXCQ9NY87 97 aa8.68□□□□□ -1.02
SSBP3-208ENST00000444533 IFITM1P13164 125 aa8.67□□□□□ -1.02
SSBP3-208ENST00000444533 SRSF9Q13242 221 aaKnown RBP eCLIP8.67□□□□□ -1.02
SSBP3-208ENST00000444533 SPATA45Q537H7 98 aa8.66□□□□□ -1.02
SSBP3-208ENST00000444533 KRTAP11-1Q8IUC1 163 aa8.66□□□□□ -1.02
SSBP3-208ENST00000444533 LITAFQ99732 161 aa8.66□□□□□ -1.02
SSBP3-208ENST00000444533 PAM16Q9Y3D7 125 aa8.66□□□□□ -1.02
SSBP3-208ENST00000444533 VPS13BQ7Z7G8 4022 aa8.65□□□□□ -1.02
SSBP3-208ENST00000444533 J3QL48 77 aa8.65□□□□□ -1.02
SSBP3-208ENST00000444533 DDTP30046 118 aa8.65□□□□□ -1.02
SSBP3-208ENST00000444533 HNRNPA3P51991 378 aaKnown RBP8.65□□□□□ -1.02
SSBP3-208ENST00000444533 LINC00518Q8N0U6 118 aa8.65□□□□□ -1.02
SSBP3-208ENST00000444533 Q8NDZ9 215 aa8.65□□□□□ -1.02
SSBP3-208ENST00000444533 PRYO14603 147 aa8.64□□□□□ -1.03
SSBP3-208ENST00000444533 ZNF861PO60384 105 aa8.64□□□□□ -1.03
SSBP3-208ENST00000444533 OXTP01178 125 aa8.64□□□□□ -1.03
SSBP3-208ENST00000444533 COX8AP10176 69 aa8.64□□□□□ -1.03
SSBP3-208ENST00000444533 FAM19A1Q7Z5A9 133 aa8.64□□□□□ -1.03
SSBP3-208ENST00000444533 OR13C6PQ8NH95 151 aa8.64□□□□□ -1.03
SSBP3-208ENST00000444533 TMEM126AQ9H061 195 aa8.64□□□□□ -1.03
SSBP3-208ENST00000444533 SOSTDC1Q6X4U4 206 aa8.63□□□□□ -1.03
SSBP3-208ENST00000444533 TRBV10-3A0A0K0K1G6 114 aa8.62□□□□□ -1.03
SSBP3-208ENST00000444533 ETDCA0A1B0GVM5 59 aa8.62□□□□□ -1.03
SSBP3-208ENST00000444533 PPDPFQ9H3Y8 114 aa8.62□□□□□ -1.03
SSBP3-208ENST00000444533 H0Y9J4 135 aa8.61□□□□□ -1.03
SSBP3-208ENST00000444533 DLEU1O43261 78 aa8.61□□□□□ -1.03
SSBP3-208ENST00000444533 HINT1P49773 126 aaPredicted RBP8.61□□□□□ -1.03
SSBP3-208ENST00000444533 SLC25A34Q6PIV7 304 aa8.61□□□□□ -1.03
SSBP3-208ENST00000444533 KCNQ1DNQ9H478 68 aa8.61□□□□□ -1.03
SSBP3-208ENST00000444533 FLG2Q5D862 2391 aaPredicted RBP8.6□□□□□ -1.03
SSBP3-208ENST00000444533 KRTAP29-1A8MX34 341 aaPredicted RBP8.6□□□□□ -1.03
SSBP3-208ENST00000444533 PYY3Q5JQD4 70 aa8.6□□□□□ -1.03
SSBP3-208ENST00000444533 MUSTN1Q8IVN3 82 aa8.6□□□□□ -1.03
SSBP3-208ENST00000444533 C14orf144Q96I85 54 aa8.6□□□□□ -1.03
SSBP3-208ENST00000444533 HIST1H4GQ99525 98 aa8.6□□□□□ -1.03
SSBP3-208ENST00000444533 TRAV23DV6A0A075B6W5 121 aa8.59□□□□□ -1.03
SSBP3-208ENST00000444533 EIF4EBP3O60516 100 aaPredicted RBP8.58□□□□□ -1.04
SSBP3-208ENST00000444533 IGLV6-57P01721 117 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 117.7 ms