RNA–Protein interactions for RNA: ENST00000444511.6

VSX1-206, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-206ENST00000444511 APOC3P02656 99 aa12.26□□□□□ -0.45
VSX1-206ENST00000444511 LINC00158P58513 81 aa12.26□□□□□ -0.45
VSX1-206ENST00000444511 MUC2Q02817 5179 aa12.25□□□□□ -0.45
VSX1-206ENST00000444511 CBLN2Q8IUK8 224 aa12.24□□□□□ -0.45
VSX1-206ENST00000444511 RETNLBQ9BQ08 111 aa12.24□□□□□ -0.45
VSX1-206ENST00000444511 SNAPINO95295 136 aa12.23□□□□□ -0.45
VSX1-206ENST00000444511 NDUFA5Q16718 116 aa12.23□□□□□ -0.45
VSX1-206ENST00000444511 A0A0U1RRA0 63 aa12.22□□□□□ -0.45
VSX1-206ENST00000444511 SVBPQ8N300 66 aa12.22□□□□□ -0.45
VSX1-206ENST00000444511 PLEKHB2Q96CS7 222 aa12.22□□□□□ -0.45
VSX1-206ENST00000444511 A0A0U1RQV1 116 aa12.21□□□□□ -0.45
VSX1-206ENST00000444511 TMEM223A0PJW6 202 aa12.21□□□□□ -0.45
VSX1-206ENST00000444511 HIGD2AQ9BW72 106 aa12.21□□□□□ -0.45
VSX1-206ENST00000444511 TRAV12-1A0A0B4J245 112 aa12.2□□□□□ -0.46
VSX1-206ENST00000444511 CHCHD1Q96BP2 118 aaKnown RBP12.2□□□□□ -0.46
VSX1-206ENST00000444511 ATP6V1G1O75348 118 aa12.19□□□□□ -0.46
VSX1-206ENST00000444511 IFI27L1Q96BM0 104 aa12.19□□□□□ -0.46
VSX1-206ENST00000444511 SMIM13P0DJ93 91 aa12.16□□□□□ -0.46
VSX1-206ENST00000444511 CTAG1AP78358 180 aa12.16□□□□□ -0.46
VSX1-206ENST00000444511 MEIG1Q5JSS6 88 aa12.16□□□□□ -0.46
VSX1-206ENST00000444511 C3orf22Q8N5N4 141 aa12.16□□□□□ -0.46
VSX1-206ENST00000444511 BOD1L2Q8IYS8 172 aa12.15□□□□□ -0.46
VSX1-206ENST00000444511 IGLV7-46A0A075B6I9 117 aa12.13□□□□□ -0.47
VSX1-206ENST00000444511 HERV-K104P63124 156 aa12.13□□□□□ -0.47
VSX1-206ENST00000444511 MIR7-3HGQ8N6C7 128 aa12.13□□□□□ -0.47
VSX1-206ENST00000444511 YPEL4Q96NS1 127 aa12.13□□□□□ -0.47
VSX1-206ENST00000444511 SPRR4Q96PI1 79 aa12.13□□□□□ -0.47
VSX1-206ENST00000444511 CDIP1Q9H305 208 aa12.13□□□□□ -0.47
VSX1-206ENST00000444511 ZNF706Q9Y5V0 76 aaPredicted RBP12.13□□□□□ -0.47
VSX1-206ENST00000444511 PRYO14603 147 aa12.12□□□□□ -0.47
VSX1-206ENST00000444511 NCR3O14931 201 aa12.11□□□□□ -0.47
VSX1-206ENST00000444511 HSBP1O75506 76 aa12.11□□□□□ -0.47
VSX1-206ENST00000444511 TPRXLQ17RH7 258 aa12.11□□□□□ -0.47
VSX1-206ENST00000444511 LINC00587B1AMM8 73 aa12.1□□□□□ -0.47
VSX1-206ENST00000444511 SPAG11AQ6PDA7 123 aa12.1□□□□□ -0.47
VSX1-206ENST00000444511 FAM19A2Q8N3H0 131 aa12.1□□□□□ -0.47
VSX1-206ENST00000444511 NDUFA12Q9UI09 145 aa12.1□□□□□ -0.47
VSX1-206ENST00000444511 MYMXA0A1B0GTQ4 84 aa12.08□□□□□ -0.48
VSX1-206ENST00000444511 H0Y8G0 127 aa12.08□□□□□ -0.48
VSX1-206ENST00000444511 LINC00337Q8N6G1 96 aa12.08□□□□□ -0.48
VSX1-206ENST00000444511 MAP1LC3CQ9BXW4 147 aa12.08□□□□□ -0.48
VSX1-206ENST00000444511 KCNQ1DNQ9H478 68 aa12.08□□□□□ -0.48
VSX1-206ENST00000444511 ETDCA0A1B0GVM5 59 aa12.07□□□□□ -0.48
VSX1-206ENST00000444511 C4orf48Q5BLP8 95 aa12.07□□□□□ -0.48
VSX1-206ENST00000444511 SPRR1AP35321 89 aa12.06□□□□□ -0.48
VSX1-206ENST00000444511 S100A12P80511 92 aa12.05□□□□□ -0.48
VSX1-206ENST00000444511 SMCR5Q8TEV8 140 aa12.05□□□□□ -0.48
VSX1-206ENST00000444511 PPDPFQ9H3Y8 114 aa12.05□□□□□ -0.48
VSX1-206ENST00000444511 TRBV10-3A0A0K0K1G6 114 aa12.04□□□□□ -0.48
VSX1-206ENST00000444511 KRTAP4-16G5E9R7 235 aaPredicted RBP12.02□□□□□ -0.49
VSX1-206ENST00000444511 LEPROTL1O95214 131 aa12.02□□□□□ -0.49
VSX1-206ENST00000444511 DAND5Q8N907 189 aa12.02□□□□□ -0.49
VSX1-206ENST00000444511 Q8NBF4 154 aa12.02□□□□□ -0.49
VSX1-206ENST00000444511 LEPROTO15243 131 aa12□□□□□ -0.49
VSX1-206ENST00000444511 TRGC2P03986 189 aa12□□□□□ -0.49
VSX1-206ENST00000444511 TSPEAR-AS2P59090 65 aa12□□□□□ -0.49
VSX1-206ENST00000444511 PLNP26678 52 aa11.99□□□□□ -0.49
VSX1-206ENST00000444511 FP248Q71RG6 208 aaPredicted RBP11.99□□□□□ -0.49
VSX1-206ENST00000444511 SERF1AO75920 110 aa11.98□□□□□ -0.49
VSX1-206ENST00000444511 DDTP30046 118 aa11.97□□□□□ -0.49
VSX1-206ENST00000444511 LOC107984156A0A0G2JMH3 177 aa11.96□□□□□ -0.49
VSX1-206ENST00000444511 B5MCH6 92 aa11.96□□□□□ -0.49
VSX1-206ENST00000444511 J3QQQ9 107 aa11.96□□□□□ -0.49
VSX1-206ENST00000444511 HERVK_113P61574 105 aa11.96□□□□□ -0.49
VSX1-206ENST00000444511 LINC00483Q53H64 154 aa11.96□□□□□ -0.49
VSX1-206ENST00000444511 GAGE2AQ6NT46 116 aa11.96□□□□□ -0.49
VSX1-206ENST00000444511 ARL17AQ8IVW1 177 aa11.96□□□□□ -0.49
VSX1-206ENST00000444511 MIEN1Q9BRT3 115 aa11.96□□□□□ -0.49
VSX1-206ENST00000444511 HSPB8Q9UJY1 196 aa11.96□□□□□ -0.49
VSX1-206ENST00000444511 TRBV10-2A0A0K0K1G8 114 aa11.95□□□□□ -0.5
VSX1-206ENST00000444511 DPM2O94777 84 aa11.95□□□□□ -0.5
VSX1-206ENST00000444511 SPINK1P00995 79 aa11.95□□□□□ -0.5
VSX1-206ENST00000444511 LINC00310P59036 64 aa11.95□□□□□ -0.5
VSX1-206ENST00000444511 MUC17Q685J3 4493 aa11.94□□□□□ -0.5
VSX1-206ENST00000444511 FABP4P15090 132 aa11.94□□□□□ -0.5
VSX1-206ENST00000444511 FAT4Q6V0I7 4981 aa11.93□□□□□ -0.5
VSX1-206ENST00000444511 LGALS3P17931 250 aaKnown RBP11.93□□□□□ -0.5
VSX1-206ENST00000444511 NMUP48645 174 aa11.93□□□□□ -0.5
VSX1-206ENST00000444511 PMCHL2Q9BQD1 86 aa11.93□□□□□ -0.5
VSX1-206ENST00000444511 SPANXB1Q9NS25 103 aaPredicted RBP11.93□□□□□ -0.5
VSX1-206ENST00000444511 ERC2-IT1O76042 136 aa11.92□□□□□ -0.5
VSX1-206ENST00000444511 LCE2AQ5TA79 106 aaPredicted RBP11.92□□□□□ -0.5
VSX1-206ENST00000444511 IGLV9-49A0A0B4J1Y8 123 aa11.91□□□□□ -0.5
VSX1-206ENST00000444511 IGKCP01834 107 aa11.91□□□□□ -0.5
VSX1-206ENST00000444511 MOBPQ13875 183 aa11.91□□□□□ -0.5
VSX1-206ENST00000444511 S100A7L2Q5SY68 101 aa11.91□□□□□ -0.5
VSX1-206ENST00000444511 Q6ZRX8 168 aa11.9□□□□□ -0.5
VSX1-206ENST00000444511 NDUFC2O95298 119 aa11.89□□□□□ -0.51
VSX1-206ENST00000444511 KRTAP13-3Q3SY46 172 aa11.89□□□□□ -0.51
VSX1-206ENST00000444511 Q9BRP9 147 aa11.89□□□□□ -0.51
VSX1-206ENST00000444511 SSBP3-AS1Q7Z2R9 100 aa11.88□□□□□ -0.51
VSX1-206ENST00000444511 IGLV6-57P01721 117 aa11.87□□□□□ -0.51
VSX1-206ENST00000444511 TRAV23DV6A0A075B6W5 121 aa11.86□□□□□ -0.51
VSX1-206ENST00000444511 JOSD1Q15040 202 aaPredicted RBP11.86□□□□□ -0.51
VSX1-206ENST00000444511 NPC2P61916 151 aa11.85□□□□□ -0.51
VSX1-206ENST00000444511 RPS29P62273 56 aaKnown RBP11.84□□□□□ -0.51
VSX1-206ENST00000444511 KRTAP9-2Q9BYQ4 174 aa11.84□□□□□ -0.51
VSX1-206ENST00000444511 A0A0J9YXY3 114 aa11.83□□□□□ -0.52
VSX1-206ENST00000444511 ZNF73O43830 326 aaPredicted RBP11.82□□□□□ -0.52
VSX1-206ENST00000444511 SOSTDC1Q6X4U4 206 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms