RNA–Protein interactions for RNA: ENST00000444061.7

SMARCA4-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 4,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-204ENST00000444061 C3orf84H3BNL1 204 aa9.76□□□□□ -0.85
SMARCA4-204ENST00000444061 NDUFC2-KCTD14E9PQ53 114 aa9.75□□□□□ -0.85
SMARCA4-204ENST00000444061 F8WDY8 70 aa9.75□□□□□ -0.85
SMARCA4-204ENST00000444061 BRK1Q8WUW1 75 aa9.75□□□□□ -0.85
SMARCA4-204ENST00000444061 C9orf116Q5BN46 136 aaPredicted RBP9.75□□□□□ -0.85
SMARCA4-204ENST00000444061 COL12A1Q99715 3063 aa9.75□□□□□ -0.85
SMARCA4-204ENST00000444061 RPL37AP8A6NKH3 93 aa9.73□□□□□ -0.85
SMARCA4-204ENST00000444061 C6orf99Q4VX62 202 aa9.73□□□□□ -0.85
SMARCA4-204ENST00000444061 CELSR3Q9NYQ7 3312 aa9.72□□□□□ -0.85
SMARCA4-204ENST00000444061 A0A096LNJ9 63 aa9.72□□□□□ -0.85
SMARCA4-204ENST00000444061 Q6JHZ5 121 aa9.72□□□□□ -0.85
SMARCA4-204ENST00000444061 A0A096LNI7 61 aa9.72□□□□□ -0.85
SMARCA4-204ENST00000444061 LINC01561Q8N1V8 128 aa9.72□□□□□ -0.85
SMARCA4-204ENST00000444061 ITPR2Q14571 2701 aa9.72□□□□□ -0.85
SMARCA4-204ENST00000444061 PLAC8L1A1L4L8 177 aa9.71□□□□□ -0.86
SMARCA4-204ENST00000444061 BOD1L1Q8NFC6 3051 aa9.7□□□□□ -0.86
SMARCA4-204ENST00000444061 ENHOQ6UWT2 76 aa9.69□□□□□ -0.86
SMARCA4-204ENST00000444061 Q6ZRU5 148 aa9.69□□□□□ -0.86
SMARCA4-204ENST00000444061 BPY2O14599 106 aa9.68□□□□□ -0.86
SMARCA4-204ENST00000444061 WIPF1O43516 503 aa9.68□□□□□ -0.86
SMARCA4-204ENST00000444061 ZNF706Q9Y5V0 76 aaPredicted RBP9.68□□□□□ -0.86
SMARCA4-204ENST00000444061 NOTCH1P46531 2555 aa9.68□□□□□ -0.86
SMARCA4-204ENST00000444061 IGHV3OR16-9A0A0B4J2B5 98 aa9.67□□□□□ -0.86
SMARCA4-204ENST00000444061 NDUFB1O75438 58 aa9.67□□□□□ -0.86
SMARCA4-204ENST00000444061 DNAH14Q0VDD8 3507 aa9.66□□□□□ -0.86
SMARCA4-204ENST00000444061 UBR5O95071 2799 aaPredicted RBP9.66□□□□□ -0.86
SMARCA4-204ENST00000444061 FREM2Q5SZK8 3169 aa9.66□□□□□ -0.86
SMARCA4-204ENST00000444061 Q8N3U1 123 aa9.66□□□□□ -0.86
SMARCA4-204ENST00000444061 DNAH10OSP0CZ25 163 aa9.66□□□□□ -0.86
SMARCA4-204ENST00000444061 DHRS4-AS1Q9P1J3 65 aa9.66□□□□□ -0.86
SMARCA4-204ENST00000444061 V9GYY9 64 aa9.66□□□□□ -0.86
SMARCA4-204ENST00000444061 PPDPFQ9H3Y8 114 aa9.65□□□□□ -0.86
SMARCA4-204ENST00000444061 ZNF73O43830 326 aaPredicted RBP9.65□□□□□ -0.86
SMARCA4-204ENST00000444061 RPL28P46779 137 aaKnown RBP9.65□□□□□ -0.86
SMARCA4-204ENST00000444061 LINC00612Q8N6U2 182 aa9.64□□□□□ -0.87
SMARCA4-204ENST00000444061 SMIM26A0A096LP01 95 aa9.63□□□□□ -0.87
SMARCA4-204ENST00000444061 LINC01546A6NGU7 62 aa9.63□□□□□ -0.87
SMARCA4-204ENST00000444061 TSPEAR-AS2P59090 65 aa9.63□□□□□ -0.87
SMARCA4-204ENST00000444061 CDIP1Q9H305 208 aa9.63□□□□□ -0.87
SMARCA4-204ENST00000444061 KALRNO60229 2985 aa9.62□□□□□ -0.87
SMARCA4-204ENST00000444061 TRBV10-3A0A0K0K1G6 114 aa9.61□□□□□ -0.87
SMARCA4-204ENST00000444061 SLPIP03973 132 aa9.61□□□□□ -0.87
SMARCA4-204ENST00000444061 HIVEP1P15822 2718 aa9.61□□□□□ -0.87
SMARCA4-204ENST00000444061 SERP1Q9Y6X1 66 aa9.6□□□□□ -0.87
SMARCA4-204ENST00000444061 TRBV7-7A0A0K0K1E9 115 aa9.6□□□□□ -0.87
SMARCA4-204ENST00000444061 C1orf137Q5JT78 98 aa9.6□□□□□ -0.87
SMARCA4-204ENST00000444061 REG3GQ6UW15 175 aa9.6□□□□□ -0.87
SMARCA4-204ENST00000444061 Q6ZQY7 126 aa9.6□□□□□ -0.87
SMARCA4-204ENST00000444061 SMIM11BQ8TCY0 68 aa9.6□□□□□ -0.87
SMARCA4-204ENST00000444061 MRPL55Q7Z7F7 128 aaKnown RBP9.59□□□□□ -0.87
SMARCA4-204ENST00000444061 C16orf90A8MZG2 172 aa9.59□□□□□ -0.87
SMARCA4-204ENST00000444061 TRAV7A0A075B6U4 112 aa9.59□□□□□ -0.87
SMARCA4-204ENST00000444061 NDUFS5O43920 106 aa9.59□□□□□ -0.87
SMARCA4-204ENST00000444061 CCKP06307 115 aa9.58□□□□□ -0.88
SMARCA4-204ENST00000444061 MPLKIPQ8TAP9 179 aa9.58□□□□□ -0.88
SMARCA4-204ENST00000444061 PRR3P79522 188 aaKnown RBP9.58□□□□□ -0.88
SMARCA4-204ENST00000444061 ITPR1Q14643 2758 aa9.58□□□□□ -0.88
SMARCA4-204ENST00000444061 IGLV5-39A0A0G2JS06 123 aa9.58□□□□□ -0.88
SMARCA4-204ENST00000444061 RTL8CO15255 209 aa9.57□□□□□ -0.88
SMARCA4-204ENST00000444061 FAM19A3Q7Z5A8 133 aa9.57□□□□□ -0.88
SMARCA4-204ENST00000444061 NBEAQ8NFP9 2946 aa9.57□□□□□ -0.88
SMARCA4-204ENST00000444061 ADGRG4Q8IZF6 3080 aa9.56□□□□□ -0.88
SMARCA4-204ENST00000444061 TACC2O95359 2948 aa9.56□□□□□ -0.88
SMARCA4-204ENST00000444061 ADAMTSL4-AS1Q5T5F5 129 aa9.56□□□□□ -0.88
SMARCA4-204ENST00000444061 CHKB-CPT1BH3BT56 60 aa9.55□□□□□ -0.88
SMARCA4-204ENST00000444061 UTP20O75691 2785 aaKnown RBP9.54□□□□□ -0.88
SMARCA4-204ENST00000444061 APLNQ9ULZ1 77 aa9.54□□□□□ -0.88
SMARCA4-204ENST00000444061 C6orf48Q9UBA6 75 aa9.54□□□□□ -0.88
SMARCA4-204ENST00000444061 IGLV5-45A0A087WSX0 123 aa9.53□□□□□ -0.88
SMARCA4-204ENST00000444061 IGLV9-49A0A0B4J1Y8 123 aa9.53□□□□□ -0.88
SMARCA4-204ENST00000444061 APCP25054 2843 aa9.53□□□□□ -0.88
SMARCA4-204ENST00000444061 PRO0461Q9UI25 63 aa9.53□□□□□ -0.88
SMARCA4-204ENST00000444061 C22orf24Q9Y442 160 aa9.53□□□□□ -0.88
SMARCA4-204ENST00000444061 ZZEF1O43149 2961 aa9.53□□□□□ -0.88
SMARCA4-204ENST00000444061 C1orf195Q5TG92 126 aa9.53□□□□□ -0.88
SMARCA4-204ENST00000444061 NBEAL1Q6ZS30 2694 aa9.53□□□□□ -0.88
SMARCA4-204ENST00000444061 A0A0U1RQV1 116 aa9.52□□□□□ -0.89
SMARCA4-204ENST00000444061 H0Y9J4 135 aa9.52□□□□□ -0.89
SMARCA4-204ENST00000444061 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.52□□□□□ -0.89
SMARCA4-204ENST00000444061 PRYO14603 147 aa9.51□□□□□ -0.89
SMARCA4-204ENST00000444061 HRCT1Q6UXD1 115 aa9.51□□□□□ -0.89
SMARCA4-204ENST00000444061 SNURFQ9Y675 71 aa9.51□□□□□ -0.89
SMARCA4-204ENST00000444061 GVQW2A0A096LPI5 108 aaPredicted RBP9.51□□□□□ -0.89
SMARCA4-204ENST00000444061 C10orf25Q5T742 122 aa9.5□□□□□ -0.89
SMARCA4-204ENST00000444061 SCXQ7RTU7 201 aa9.5□□□□□ -0.89
SMARCA4-204ENST00000444061 RPS28P62857 69 aaKnown RBP9.48□□□□□ -0.89
SMARCA4-204ENST00000444061 SMCPP49901 116 aaPredicted RBP9.48□□□□□ -0.89
SMARCA4-204ENST00000444061 FAM229AH3BQW9 127 aa9.48□□□□□ -0.89
SMARCA4-204ENST00000444061 SPTSSBQ8NFR3 76 aa9.48□□□□□ -0.89
SMARCA4-204ENST00000444061 PRR34Q9NV39 138 aa9.46□□□□□ -0.89
SMARCA4-204ENST00000444061 CRYGAP11844 174 aa9.46□□□□□ -0.89
SMARCA4-204ENST00000444061 Q8N814 137 aa9.46□□□□□ -0.89
SMARCA4-204ENST00000444061 NSD1Q96L73 2696 aaPredicted RBP9.46□□□□□ -0.89
SMARCA4-204ENST00000444061 PRLHP81277 87 aa9.45□□□□□ -0.9
SMARCA4-204ENST00000444061 SPINK6Q6UWN8 80 aa9.45□□□□□ -0.9
SMARCA4-204ENST00000444061 USP34Q70CQ2 3546 aa9.45□□□□□ -0.9
SMARCA4-204ENST00000444061 LINC00167Q96N53 147 aa9.44□□□□□ -0.9
SMARCA4-204ENST00000444061 A0A087WVE0 104 aa9.44□□□□□ -0.9
SMARCA4-204ENST00000444061 BCE1O60756 84 aa9.43□□□□□ -0.9
SMARCA4-204ENST00000444061 SPEGQ15772 3267 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 194.9 ms