RNA–Protein interactions for RNA: ENST00000443016.1

USP6NL-203, Transcript of USP6 N-terminal like, humanhuman

TSL 2

Gene USP6NL, Length 2,491 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-203ENST00000443016 CDKN2A-AS1Q9UH64 79 aa5.64□□□□□ -1.51
USP6NL-203ENST00000443016 CNBPP62633 177 aaKnown RBP5.63□□□□□ -1.51
USP6NL-203ENST00000443016 FOXI1Q12951 378 aa5.63□□□□□ -1.51
USP6NL-203ENST00000443016 MTURNQ8N3F0 131 aa5.63□□□□□ -1.51
USP6NL-203ENST00000443016 PAM16Q9Y3D7 125 aa5.63□□□□□ -1.51
USP6NL-203ENST00000443016 IGHV3-64A0A075B6Q5 118 aa5.63□□□□□ -1.51
USP6NL-203ENST00000443016 COX6A2Q02221 97 aa5.63□□□□□ -1.51
USP6NL-203ENST00000443016 SDIM1Q6ZPB5 146 aa5.63□□□□□ -1.51
USP6NL-203ENST00000443016 C5orf38Q86SI9 138 aa5.63□□□□□ -1.51
USP6NL-203ENST00000443016 SPANXB1Q9NS25 103 aaPredicted RBP5.63□□□□□ -1.51
USP6NL-203ENST00000443016 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.63□□□□□ -1.51
USP6NL-203ENST00000443016 C9orf118A6NHY6 69 aa5.62□□□□□ -1.51
USP6NL-203ENST00000443016 IGHV1-58A0A0C4DH39 117 aa5.62□□□□□ -1.51
USP6NL-203ENST00000443016 TMEM223A0PJW6 202 aa5.62□□□□□ -1.51
USP6NL-203ENST00000443016 SPINK8P0C7L1 97 aa5.62□□□□□ -1.51
USP6NL-203ENST00000443016 RPL37AP61513 92 aaKnown RBP5.62□□□□□ -1.51
USP6NL-203ENST00000443016 HIGD2BQ4VC39 106 aa5.62□□□□□ -1.51
USP6NL-203ENST00000443016 LCE2CQ5TA81 110 aa5.62□□□□□ -1.51
USP6NL-203ENST00000443016 SMIM1B2RUZ4 78 aa5.61□□□□□ -1.51
USP6NL-203ENST00000443016 PRSS2P07478 247 aa5.61□□□□□ -1.51
USP6NL-203ENST00000443016 PLEKHB2Q96CS7 222 aa5.61□□□□□ -1.51
USP6NL-203ENST00000443016 E9PLD3 99 aa5.6□□□□□ -1.51
USP6NL-203ENST00000443016 PANO1I0J062 215 aa5.6□□□□□ -1.51
USP6NL-203ENST00000443016 SRSF9Q13242 221 aaKnown RBP eCLIP5.6□□□□□ -1.51
USP6NL-203ENST00000443016 C15orf56Q8N910 161 aa5.6□□□□□ -1.51
USP6NL-203ENST00000443016 ORAOV1Q8WV07 137 aa5.6□□□□□ -1.51
USP6NL-203ENST00000443016 SLPIP03973 132 aa5.6□□□□□ -1.51
USP6NL-203ENST00000443016 LGALS3P17931 250 aaKnown RBP5.6□□□□□ -1.51
USP6NL-203ENST00000443016 STPG4Q8N801 248 aa5.6□□□□□ -1.51
USP6NL-203ENST00000443016 IGLV9-49A0A0B4J1Y8 123 aa5.59□□□□□ -1.51
USP6NL-203ENST00000443016 FAM236DA0A1B0GTK5 79 aa5.59□□□□□ -1.51
USP6NL-203ENST00000443016 LEPROTO15243 131 aa5.59□□□□□ -1.51
USP6NL-203ENST00000443016 FAM236CP0DP71 79 aa5.59□□□□□ -1.51
USP6NL-203ENST00000443016 NMUP48645 174 aa5.59□□□□□ -1.51
USP6NL-203ENST00000443016 SPATA45Q537H7 98 aa5.59□□□□□ -1.51
USP6NL-203ENST00000443016 LCE2AQ5TA79 106 aaPredicted RBP5.59□□□□□ -1.51
USP6NL-203ENST00000443016 SFTA2Q6UW10 78 aa5.59□□□□□ -1.51
USP6NL-203ENST00000443016 TOMM7Q9P0U1 55 aa5.59□□□□□ -1.51
USP6NL-203ENST00000443016 IGLV5-39A0A0G2JS06 123 aa5.59□□□□□ -1.51
USP6NL-203ENST00000443016 KRTAP29-1A8MX34 341 aaPredicted RBP5.59□□□□□ -1.51
USP6NL-203ENST00000443016 CHTF8P0CG12 524 aa5.59□□□□□ -1.51
USP6NL-203ENST00000443016 CXCL5P42830 114 aa5.59□□□□□ -1.51
USP6NL-203ENST00000443016 SPAG11BQ08648 103 aa5.59□□□□□ -1.51
USP6NL-203ENST00000443016 Q8IZM0 81 aa5.59□□□□□ -1.51
USP6NL-203ENST00000443016 COX7B2Q8TF08 81 aa5.59□□□□□ -1.51
USP6NL-203ENST00000443016 LRP1Q07954 4544 aaKnown RBP5.59□□□□□ -1.52
USP6NL-203ENST00000443016 A0A087WYN8 130 aa5.58□□□□□ -1.52
USP6NL-203ENST00000443016 IGKV2-24A0A0C4DH68 120 aa5.58□□□□□ -1.52
USP6NL-203ENST00000443016 J3QQQ9 107 aa5.58□□□□□ -1.52
USP6NL-203ENST00000443016 RPL18AQ02543 176 aaKnown RBP5.58□□□□□ -1.52
USP6NL-203ENST00000443016 GVQW2A0A096LPI5 108 aaPredicted RBP5.57□□□□□ -1.52
USP6NL-203ENST00000443016 KRTAP10-4P60372 401 aaPredicted RBP5.57□□□□□ -1.52
USP6NL-203ENST00000443016 SPACA4Q8TDM5 124 aa5.57□□□□□ -1.52
USP6NL-203ENST00000443016 MYMXA0A1B0GTQ4 84 aa5.56□□□□□ -1.52
USP6NL-203ENST00000443016 RPL24P83731 157 aaKnown RBP5.56□□□□□ -1.52
USP6NL-203ENST00000443016 CIRBPQ14011 172 aaKnown RBP5.56□□□□□ -1.52
USP6NL-203ENST00000443016 LINC00526Q96FQ7 95 aa5.56□□□□□ -1.52
USP6NL-203ENST00000443016 NDUFA1O15239 70 aa5.56□□□□□ -1.52
USP6NL-203ENST00000443016 C7orf33Q8WU49 177 aa5.56□□□□□ -1.52
USP6NL-203ENST00000443016 NDUFA12Q9UI09 145 aa5.56□□□□□ -1.52
USP6NL-203ENST00000443016 IGKV2D-26A0A0A0MRZ7 120 aa5.55□□□□□ -1.52
USP6NL-203ENST00000443016 ZNF815PA8K554 130 aa5.55□□□□□ -1.52
USP6NL-203ENST00000443016 CAMK2N2Q96S95 79 aa5.55□□□□□ -1.52
USP6NL-203ENST00000443016 COX8AP10176 69 aa5.54□□□□□ -1.52
USP6NL-203ENST00000443016 TSPEAR-AS2P59090 65 aa5.54□□□□□ -1.52
USP6NL-203ENST00000443016 SLC25A34Q6PIV7 304 aa5.54□□□□□ -1.52
USP6NL-203ENST00000443016 OR13C6PQ8NH95 151 aa5.54□□□□□ -1.52
USP6NL-203ENST00000443016 CARD19Q96LW7 228 aa5.54□□□□□ -1.52
USP6NL-203ENST00000443016 LINC00474Q9P2X8 69 aa5.54□□□□□ -1.52
USP6NL-203ENST00000443016 SCGB1D4Q6XE38 83 aa5.54□□□□□ -1.52
USP6NL-203ENST00000443016 MRPL55Q7Z7F7 128 aaKnown RBP5.54□□□□□ -1.52
USP6NL-203ENST00000443016 PLAC8Q9NZF1 115 aa5.54□□□□□ -1.52
USP6NL-203ENST00000443016 HNRNPA3P51991 378 aaKnown RBP5.53□□□□□ -1.52
USP6NL-203ENST00000443016 SYCNQ0VAF6 134 aa5.53□□□□□ -1.52
USP6NL-203ENST00000443016 KIAA0087Q14695 138 aa5.53□□□□□ -1.52
USP6NL-203ENST00000443016 A0A096LNI7 61 aa5.53□□□□□ -1.52
USP6NL-203ENST00000443016 MEIG1Q5JSS6 88 aa5.53□□□□□ -1.52
USP6NL-203ENST00000443016 PCP2Q8IVA1 136 aa5.53□□□□□ -1.52
USP6NL-203ENST00000443016 ZNF625Q96I27 306 aaPredicted RBP5.53□□□□□ -1.52
USP6NL-203ENST00000443016 UQCR10Q9UDW1 63 aa5.53□□□□□ -1.52
USP6NL-203ENST00000443016 TRBV30A0A0K0K1B3 111 aa5.52□□□□□ -1.53
USP6NL-203ENST00000443016 C8orf87E5RJ46 101 aa5.52□□□□□ -1.53
USP6NL-203ENST00000443016 LCE2BO14633 110 aa5.52□□□□□ -1.53
USP6NL-203ENST00000443016 C2orf82Q6UX34 121 aa5.52□□□□□ -1.53
USP6NL-203ENST00000443016 TTTY13Q9BZ97 58 aa5.51□□□□□ -1.53
USP6NL-203ENST00000443016 A0A1B0GWB2 263 aa5.51□□□□□ -1.53
USP6NL-203ENST00000443016 A0A0J9YXY3 114 aa5.5□□□□□ -1.53
USP6NL-203ENST00000443016 TIMM17BO60830 172 aa5.5□□□□□ -1.53
USP6NL-203ENST00000443016 COX17Q14061 63 aa5.5□□□□□ -1.53
USP6NL-203ENST00000443016 UNQ6190/PRO20217Q6UXQ8 127 aa5.5□□□□□ -1.53
USP6NL-203ENST00000443016 Q6ZRU5 148 aa5.5□□□□□ -1.53
USP6NL-203ENST00000443016 PRO1933Q9H354 126 aa5.5□□□□□ -1.53
USP6NL-203ENST00000443016 ERG28Q9UKR5 140 aa5.5□□□□□ -1.53
USP6NL-203ENST00000443016 FAT3Q8TDW7 4589 aa5.5□□□□□ -1.53
USP6NL-203ENST00000443016 LOC107984640A0A0U1RRK4 108 aa5.49□□□□□ -1.53
USP6NL-203ENST00000443016 PMAIP1Q13794 54 aa5.49□□□□□ -1.53
USP6NL-203ENST00000443016 COPS9Q8WXC6 57 aa5.49□□□□□ -1.53
USP6NL-203ENST00000443016 MIEN1Q9BRT3 115 aa5.49□□□□□ -1.53
USP6NL-203ENST00000443016 C6orf48Q9UBA6 75 aa5.49□□□□□ -1.53
USP6NL-203ENST00000443016 LINC00158P58513 81 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms