RNA–Protein interactions for RNA: ENST00000441756.1

MCF2L-217, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 370 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-217ENST00000441756 SNHG12Q9BXW3 62 aa10.24□□□□□ -0.77
MCF2L-217ENST00000441756 NHP2Q9NX24 153 aaKnown RBP10.24□□□□□ -0.77
MCF2L-217ENST00000441756 A0A0B4J2C4 111 aa10.23□□□□□ -0.77
MCF2L-217ENST00000441756 RAB37Q96AX2 223 aa10.23□□□□□ -0.77
MCF2L-217ENST00000441756 RYR3Q15413 4870 aa10.23□□□□□ -0.77
MCF2L-217ENST00000441756 EIF4EBP3O60516 100 aaPredicted RBP10.22□□□□□ -0.77
MCF2L-217ENST00000441756 PLA2G2DQ9UNK4 145 aa10.22□□□□□ -0.77
MCF2L-217ENST00000441756 A0A096LNI7 61 aa10.21□□□□□ -0.77
MCF2L-217ENST00000441756 TRAV13-2A0A0B4J235 113 aa10.21□□□□□ -0.77
MCF2L-217ENST00000441756 A0A1B0GWB2 263 aa10.21□□□□□ -0.77
MCF2L-217ENST00000441756 C9orf129Q5T035 196 aaKnown RBP10.21□□□□□ -0.77
MCF2L-217ENST00000441756 SDIM1Q6ZPB5 146 aa10.21□□□□□ -0.77
MCF2L-217ENST00000441756 IGKV2-24A0A0C4DH68 120 aa10.2□□□□□ -0.78
MCF2L-217ENST00000441756 TRBV10-2A0A0K0K1G8 114 aa10.2□□□□□ -0.78
MCF2L-217ENST00000441756 COL5A1-AS1Q5SY13 56 aa10.2□□□□□ -0.78
MCF2L-217ENST00000441756 CFC1BP0CG36 223 aa10.19□□□□□ -0.78
MCF2L-217ENST00000441756 CFC1P0CG37 223 aa10.19□□□□□ -0.78
MCF2L-217ENST00000441756 NKAPP1Q8N9T2 125 aa10.19□□□□□ -0.78
MCF2L-217ENST00000441756 VPREB1P12018 145 aa10.18□□□□□ -0.78
MCF2L-217ENST00000441756 LBHQ53QV2 105 aaPredicted RBP10.18□□□□□ -0.78
MCF2L-217ENST00000441756 PRO1854Q9UHT4 67 aa10.18□□□□□ -0.78
MCF2L-217ENST00000441756 IGLV5-37A0A075B6J1 123 aa10.17□□□□□ -0.78
MCF2L-217ENST00000441756 LINC01620Q4KN68 170 aa10.17□□□□□ -0.78
MCF2L-217ENST00000441756 K7ERJ3 54 aa10.16□□□□□ -0.78
MCF2L-217ENST00000441756 M0R378 163 aa10.16□□□□□ -0.78
MCF2L-217ENST00000441756 NCR3O14931 201 aa10.16□□□□□ -0.78
MCF2L-217ENST00000441756 KRTAP10-2P60368 255 aa10.16□□□□□ -0.78
MCF2L-217ENST00000441756 CBY1Q9Y3M2 126 aa10.16□□□□□ -0.78
MCF2L-217ENST00000441756 IGKV2-28A0A075B6P5 120 aa10.15□□□□□ -0.78
MCF2L-217ENST00000441756 IGKV2D-28P01615 120 aa10.15□□□□□ -0.78
MCF2L-217ENST00000441756 RPL13AP40429 203 aaKnown RBP10.15□□□□□ -0.78
MCF2L-217ENST00000441756 S100A7L2Q5SY68 101 aa10.15□□□□□ -0.78
MCF2L-217ENST00000441756 OR13C6PQ8NH95 151 aa10.15□□□□□ -0.78
MCF2L-217ENST00000441756 FUSP35637 526 aaKnown RBP eCLIP10.14□□□□□ -0.79
MCF2L-217ENST00000441756 FAM19A5Q7Z5A7 132 aaPredicted RBP10.14□□□□□ -0.79
MCF2L-217ENST00000441756 LINC00337Q8N6G1 96 aa10.14□□□□□ -0.79
MCF2L-217ENST00000441756 SPACA4Q8TDM5 124 aa10.14□□□□□ -0.79
MCF2L-217ENST00000441756 DPH3Q96FX2 82 aa10.14□□□□□ -0.79
MCF2L-217ENST00000441756 TMEM126AQ9H061 195 aa10.14□□□□□ -0.79
MCF2L-217ENST00000441756 DNAH10Q8IVF4 4471 aa10.14□□□□□ -0.79
MCF2L-217ENST00000441756 CHTF8P0CG12 524 aa10.13□□□□□ -0.79
MCF2L-217ENST00000441756 Q1RN00 199 aa10.13□□□□□ -0.79
MCF2L-217ENST00000441756 SERTAD4-AS1Q5TG53 156 aa10.13□□□□□ -0.79
MCF2L-217ENST00000441756 Q8NDZ9 215 aa10.13□□□□□ -0.79
MCF2L-217ENST00000441756 PRR3P79522 188 aaKnown RBP10.12□□□□□ -0.79
MCF2L-217ENST00000441756 FAM168BA1KXE4 195 aa10.11□□□□□ -0.79
MCF2L-217ENST00000441756 M0QXV9 152 aa10.11□□□□□ -0.79
MCF2L-217ENST00000441756 A0A1B0GVY2 172 aa10.1□□□□□ -0.79
MCF2L-217ENST00000441756 H7C2G1 150 aa10.1□□□□□ -0.79
MCF2L-217ENST00000441756 MRPL55Q7Z7F7 128 aaKnown RBP10.1□□□□□ -0.79
MCF2L-217ENST00000441756 C22orf24Q9Y442 160 aa10.1□□□□□ -0.79
MCF2L-217ENST00000441756 DNAH2Q9P225 4427 aa10.1□□□□□ -0.79
MCF2L-217ENST00000441756 HYDINQ4G0P3 5121 aa10.1□□□□□ -0.79
MCF2L-217ENST00000441756 SACSQ9NZJ4 4579 aa10.09□□□□□ -0.79
MCF2L-217ENST00000441756 TSPAN13O95857 204 aa10.09□□□□□ -0.79
MCF2L-217ENST00000441756 IGLV6-57P01721 117 aa10.09□□□□□ -0.79
MCF2L-217ENST00000441756 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.09□□□□□ -0.79
MCF2L-217ENST00000441756 A0A1W2PNN7 141 aa10.08□□□□□ -0.8
MCF2L-217ENST00000441756 TAX1BP3O14907 124 aa10.08□□□□□ -0.8
MCF2L-217ENST00000441756 LYRM7Q5U5X0 104 aa10.08□□□□□ -0.8
MCF2L-217ENST00000441756 C7orf33Q8WU49 177 aa10.08□□□□□ -0.8
MCF2L-217ENST00000441756 FRAS1Q86XX4 4008 aa10.08□□□□□ -0.8
MCF2L-217ENST00000441756 DNAH17Q9UFH2 4485 aa10.07□□□□□ -0.8
MCF2L-217ENST00000441756 TRBV10-3A0A0K0K1G6 114 aa10.07□□□□□ -0.8
MCF2L-217ENST00000441756 C9orf118A6NHY6 69 aa10.07□□□□□ -0.8
MCF2L-217ENST00000441756 A0A087WYN8 130 aa10.06□□□□□ -0.8
MCF2L-217ENST00000441756 PANO1I0J062 215 aa10.06□□□□□ -0.8
MCF2L-217ENST00000441756 COX6CP09669 75 aa10.06□□□□□ -0.8
MCF2L-217ENST00000441756 PSMB2P49721 201 aa10.06□□□□□ -0.8
MCF2L-217ENST00000441756 PLAC8Q9NZF1 115 aa10.06□□□□□ -0.8
MCF2L-217ENST00000441756 TRAV23DV6A0A075B6W5 121 aa10.05□□□□□ -0.8
MCF2L-217ENST00000441756 GAGE10A6NGK3 116 aa10.05□□□□□ -0.8
MCF2L-217ENST00000441756 RPL28P46779 137 aaKnown RBP10.05□□□□□ -0.8
MCF2L-217ENST00000441756 KRTAP7-1Q8IUC3 87 aa10.05□□□□□ -0.8
MCF2L-217ENST00000441756 EPM2AB3EWF7 344 aa10.04□□□□□ -0.8
MCF2L-217ENST00000441756 PRYO14603 147 aa10.04□□□□□ -0.8
MCF2L-217ENST00000441756 KRTAP10-1P60331 282 aa10.04□□□□□ -0.8
MCF2L-217ENST00000441756 UBE2BP63146 152 aa10.04□□□□□ -0.8
MCF2L-217ENST00000441756 Q6ZSA8 131 aa10.04□□□□□ -0.8
MCF2L-217ENST00000441756 SMIM11BQ8TCY0 68 aa10.04□□□□□ -0.8
MCF2L-217ENST00000441756 LINC00167Q96N53 147 aa10.04□□□□□ -0.8
MCF2L-217ENST00000441756 IGLV1-50A0A075B6I6 118 aa10.03□□□□□ -0.8
MCF2L-217ENST00000441756 H3BUT2 72 aa10.03□□□□□ -0.8
MCF2L-217ENST00000441756 RYR2Q92736 4967 aa10.03□□□□□ -0.8
MCF2L-217ENST00000441756 VAMP3Q15836 100 aa10.02□□□□□ -0.81
MCF2L-217ENST00000441756 DIRC1Q969H9 104 aa10.02□□□□□ -0.81
MCF2L-217ENST00000441756 KCNQ1DNQ9H478 68 aa10.02□□□□□ -0.81
MCF2L-217ENST00000441756 FABP2P12104 132 aa10.01□□□□□ -0.81
MCF2L-217ENST00000441756 PHF5AQ7RTV0 110 aaKnown RBP10.01□□□□□ -0.81
MCF2L-217ENST00000441756 A0A1W2PPM0 123 aa10□□□□□ -0.81
MCF2L-217ENST00000441756 RPL37AP8A6NKH3 93 aa10□□□□□ -0.81
MCF2L-217ENST00000441756 TRIAP1O43715 76 aa10□□□□□ -0.81
MCF2L-217ENST00000441756 ZNF73O43830 326 aaPredicted RBP10□□□□□ -0.81
MCF2L-217ENST00000441756 SCGB1C2P0DMR2 95 aa10□□□□□ -0.81
MCF2L-217ENST00000441756 NAA38Q9BRA0 125 aaKnown RBP10□□□□□ -0.81
MCF2L-217ENST00000441756 TRBV7-6A0A0J9YX20 115 aa9.98□□□□□ -0.81
MCF2L-217ENST00000441756 H0YGX0 51 aa9.98□□□□□ -0.81
MCF2L-217ENST00000441756 C6orf99Q4VX62 202 aa9.98□□□□□ -0.81
MCF2L-217ENST00000441756 FAM30AQ9NZY2 134 aa9.98□□□□□ -0.81
MCF2L-217ENST00000441756 REG3GQ6UW15 175 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 166.1 ms