RNA–Protein interactions for RNA: ENST00000439681.1

UBR3-205, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 2

Gene UBR3, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-205ENST00000439681 CIRBPQ14011 172 aaKnown RBP4.78□□□□□ -1.64
UBR3-205ENST00000439681 GAGE2EQ4V326 116 aa4.78□□□□□ -1.64
UBR3-205ENST00000439681 LBHQ53QV2 105 aaPredicted RBP4.78□□□□□ -1.64
UBR3-205ENST00000439681 SND1-IT1Q9HBX3 110 aa4.78□□□□□ -1.64
UBR3-205ENST00000439681 UQCR10Q9UDW1 63 aa4.78□□□□□ -1.64
UBR3-205ENST00000439681 GAGE2DQ9UEU5 116 aa4.78□□□□□ -1.64
UBR3-205ENST00000439681 C16orf90A8MZG2 172 aa4.77□□□□□ -1.65
UBR3-205ENST00000439681 PTTG1IPP53801 180 aa4.77□□□□□ -1.65
UBR3-205ENST00000439681 RPL18AQ02543 176 aaKnown RBP4.77□□□□□ -1.65
UBR3-205ENST00000439681 C9orf129Q5T035 196 aaKnown RBP4.77□□□□□ -1.65
UBR3-205ENST00000439681 MIEN1Q9BRT3 115 aa4.77□□□□□ -1.65
UBR3-205ENST00000439681 XAGE1AQ9HD64 81 aa4.77□□□□□ -1.65
UBR3-205ENST00000439681 HIGD1BQ9P298 99 aa4.77□□□□□ -1.65
UBR3-205ENST00000439681 PKHD1P08F94 4074 aa4.77□□□□□ -1.65
UBR3-205ENST00000439681 CHTF8P0CG12 524 aa4.77□□□□□ -1.65
UBR3-205ENST00000439681 SOSTDC1Q6X4U4 206 aa4.77□□□□□ -1.65
UBR3-205ENST00000439681 SPANXDQ9BXN6 97 aa4.77□□□□□ -1.65
UBR3-205ENST00000439681 SPANXB1Q9NS25 103 aaPredicted RBP4.77□□□□□ -1.65
UBR3-205ENST00000439681 SPANXCQ9NY87 97 aa4.77□□□□□ -1.65
UBR3-205ENST00000439681 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.77□□□□□ -1.65
UBR3-205ENST00000439681 LRP1BQ9NZR2 4599 aa4.77□□□□□ -1.65
UBR3-205ENST00000439681 LOC107984156A0A0G2JMH3 177 aa4.76□□□□□ -1.65
UBR3-205ENST00000439681 ARL17AQ8IVW1 177 aa4.76□□□□□ -1.65
UBR3-205ENST00000439681 LINC00308Q8TCZ7 52 aa4.76□□□□□ -1.65
UBR3-205ENST00000439681 FAM30AQ9NZY2 134 aa4.76□□□□□ -1.65
UBR3-205ENST00000439681 IGKV2-24A0A0C4DH68 120 aa4.75□□□□□ -1.65
UBR3-205ENST00000439681 KRTAP7-1Q8IUC3 87 aa4.75□□□□□ -1.65
UBR3-205ENST00000439681 Q8NDZ9 215 aa4.75□□□□□ -1.65
UBR3-205ENST00000439681 EPPK1P58107 5090 aaKnown RBP4.75□□□□□ -1.65
UBR3-205ENST00000439681 A0A1W2PNN7 141 aa4.75□□□□□ -1.65
UBR3-205ENST00000439681 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.75□□□□□ -1.65
UBR3-205ENST00000439681 NPC2P61916 151 aa4.75□□□□□ -1.65
UBR3-205ENST00000439681 Q6ZSA8 131 aa4.75□□□□□ -1.65
UBR3-205ENST00000439681 Q6ZVH6 145 aa4.75□□□□□ -1.65
UBR3-205ENST00000439681 MUSTN1Q8IVN3 82 aa4.75□□□□□ -1.65
UBR3-205ENST00000439681 SPACA4Q8TDM5 124 aa4.75□□□□□ -1.65
UBR3-205ENST00000439681 PKIGQ9Y2B9 76 aa4.75□□□□□ -1.65
UBR3-205ENST00000439681 FAM168BA1KXE4 195 aa4.74□□□□□ -1.65
UBR3-205ENST00000439681 SRSF9Q13242 221 aaKnown RBP eCLIP4.74□□□□□ -1.65
UBR3-205ENST00000439681 EPM2AB3EWF7 344 aa4.74□□□□□ -1.65
UBR3-205ENST00000439681 TSTD3H0UI37 97 aa4.74□□□□□ -1.65
UBR3-205ENST00000439681 IFITM1P13164 125 aa4.74□□□□□ -1.65
UBR3-205ENST00000439681 SERTAD4-AS1Q5TG53 156 aa4.74□□□□□ -1.65
UBR3-205ENST00000439681 HIST1H4GQ99525 98 aa4.74□□□□□ -1.65
UBR3-205ENST00000439681 LINC00474Q9P2X8 69 aa4.74□□□□□ -1.65
UBR3-205ENST00000439681 HNRNPA3P51991 378 aaKnown RBP4.73□□□□□ -1.65
UBR3-205ENST00000439681 PRR3P79522 188 aaKnown RBP4.73□□□□□ -1.65
UBR3-205ENST00000439681 PPDPFQ9H3Y8 114 aa4.73□□□□□ -1.65
UBR3-205ENST00000439681 PLA2G2DQ9UNK4 145 aa4.73□□□□□ -1.65
UBR3-205ENST00000439681 A0A087WYN8 130 aa4.72□□□□□ -1.65
UBR3-205ENST00000439681 VPREB1P12018 145 aa4.72□□□□□ -1.65
UBR3-205ENST00000439681 TAL2Q16559 108 aa4.72□□□□□ -1.65
UBR3-205ENST00000439681 KRTAP9-2Q9BYQ4 174 aa4.72□□□□□ -1.65
UBR3-205ENST00000439681 DPH3Q96FX2 82 aa4.72□□□□□ -1.65
UBR3-205ENST00000439681 PLAC8Q9NZF1 115 aa4.72□□□□□ -1.65
UBR3-205ENST00000439681 IGLV5-37A0A075B6J1 123 aa4.71□□□□□ -1.65
UBR3-205ENST00000439681 NDUFC2O95298 119 aa4.71□□□□□ -1.65
UBR3-205ENST00000439681 DDTP30046 118 aa4.71□□□□□ -1.65
UBR3-205ENST00000439681 HSD52Q0P140 79 aa4.71□□□□□ -1.65
UBR3-205ENST00000439681 FAM19A5Q7Z5A7 132 aaPredicted RBP4.71□□□□□ -1.65
UBR3-205ENST00000439681 CEND1Q8N111 149 aa4.71□□□□□ -1.65
UBR3-205ENST00000439681 IGKV2-28A0A075B6P5 120 aa4.71□□□□□ -1.66
UBR3-205ENST00000439681 KRTAP9-6A0A140TA67 174 aa4.71□□□□□ -1.66
UBR3-205ENST00000439681 IGKV2D-28P01615 120 aa4.71□□□□□ -1.66
UBR3-205ENST00000439681 CIRBP-AS1Q8TBR5 109 aa4.71□□□□□ -1.66
UBR3-205ENST00000439681 COPS9Q8WXC6 57 aa4.71□□□□□ -1.66
UBR3-205ENST00000439681 C22orf24Q9Y442 160 aa4.71□□□□□ -1.66
UBR3-205ENST00000439681 APOBP04114 4563 aaKnown RBP4.7□□□□□ -1.66
UBR3-205ENST00000439681 XGP55808 180 aa4.7□□□□□ -1.66
UBR3-205ENST00000439681 HAMPP81172 84 aa4.7□□□□□ -1.66
UBR3-205ENST00000439681 RPL24P83731 157 aaKnown RBP4.7□□□□□ -1.66
UBR3-205ENST00000439681 SCXQ7RTU7 201 aa4.7□□□□□ -1.66
UBR3-205ENST00000439681 LCE2BO14633 110 aa4.7□□□□□ -1.66
UBR3-205ENST00000439681 FXYD2P54710 66 aa4.7□□□□□ -1.66
UBR3-205ENST00000439681 NCR3O14931 201 aa4.69□□□□□ -1.66
UBR3-205ENST00000439681 BVES-AS1Q5T3Y7 98 aa4.69□□□□□ -1.66
UBR3-205ENST00000439681 PHF5AQ7RTV0 110 aaKnown RBP4.69□□□□□ -1.66
UBR3-205ENST00000439681 C7orf33Q8WU49 177 aa4.69□□□□□ -1.66
UBR3-205ENST00000439681 TRBV10-2A0A0K0K1G8 114 aa4.68□□□□□ -1.66
UBR3-205ENST00000439681 M0QXV9 152 aa4.68□□□□□ -1.66
UBR3-205ENST00000439681 M0R378 163 aa4.68□□□□□ -1.66
UBR3-205ENST00000439681 CFC1BP0CG36 223 aa4.68□□□□□ -1.66
UBR3-205ENST00000439681 CFC1P0CG37 223 aa4.68□□□□□ -1.66
UBR3-205ENST00000439681 KRTAP11-1Q8IUC1 163 aa4.68□□□□□ -1.66
UBR3-205ENST00000439681 LINC00167Q96N53 147 aa4.68□□□□□ -1.66
UBR3-205ENST00000439681 GAGE10A6NGK3 116 aa4.68□□□□□ -1.66
UBR3-205ENST00000439681 HINT1P49773 126 aaPredicted RBP4.68□□□□□ -1.66
UBR3-205ENST00000439681 MRPL55Q7Z7F7 128 aaKnown RBP4.68□□□□□ -1.66
UBR3-205ENST00000439681 LINC00337Q8N6G1 96 aa4.68□□□□□ -1.66
UBR3-205ENST00000439681 NKAPP1Q8N9T2 125 aa4.68□□□□□ -1.66
UBR3-205ENST00000439681 RYR1P21817 5038 aa4.67□□□□□ -1.66
UBR3-205ENST00000439681 IGLV6-57P01721 117 aa4.67□□□□□ -1.66
UBR3-205ENST00000439681 IGLV1-50A0A075B6I6 118 aa4.66□□□□□ -1.66
UBR3-205ENST00000439681 TRBV10-3A0A0K0K1G6 114 aa4.66□□□□□ -1.66
UBR3-205ENST00000439681 A0A1B0GWB2 263 aa4.66□□□□□ -1.66
UBR3-205ENST00000439681 RPL37AP8A6NKH3 93 aa4.66□□□□□ -1.66
UBR3-205ENST00000439681 BIRC6Q9NR09 4857 aa4.66□□□□□ -1.66
UBR3-205ENST00000439681 KRTAP9-8Q9BYQ0 159 aa4.65□□□□□ -1.66
UBR3-205ENST00000439681 TRAV13-2A0A0B4J235 113 aa4.65□□□□□ -1.67
UBR3-205ENST00000439681 A0A0B4J2C4 111 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms