RNA–Protein interactions for RNA: ENST00000439176.5

ERCC8-203, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 5

Gene ERCC8, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-203ENST00000439176 UQCC3Q6UW78 93 aa4.03□□□□□ -1.76
ERCC8-203ENST00000439176 FA2HQ7L5A8 372 aa4.03□□□□□ -1.76
ERCC8-203ENST00000439176 GNB1LQ9BYB4 327 aa4.03□□□□□ -1.76
ERCC8-203ENST00000439176 PRYO14603 147 aa4.02□□□□□ -1.77
ERCC8-203ENST00000439176 SPINK8P0C7L1 97 aa4.02□□□□□ -1.77
ERCC8-203ENST00000439176 ADCYAP1P18509 176 aa4.02□□□□□ -1.77
ERCC8-203ENST00000439176 RPL24P83731 157 aaKnown RBP4.02□□□□□ -1.77
ERCC8-203ENST00000439176 CLLU1Q5K131 121 aa4.02□□□□□ -1.77
ERCC8-203ENST00000439176 SFTA2Q6UW10 78 aa4.02□□□□□ -1.77
ERCC8-203ENST00000439176 IGLV5-37A0A075B6J1 123 aa4.01□□□□□ -1.77
ERCC8-203ENST00000439176 IGKV2D-26A0A0A0MRZ7 120 aa4.01□□□□□ -1.77
ERCC8-203ENST00000439176 TMEM218A2RU14 115 aa4.01□□□□□ -1.77
ERCC8-203ENST00000439176 LINC01546A6NGU7 62 aa4.01□□□□□ -1.77
ERCC8-203ENST00000439176 PFN2P35080 140 aa4.01□□□□□ -1.77
ERCC8-203ENST00000439176 NDUFA6P56556 154 aa4.01□□□□□ -1.77
ERCC8-203ENST00000439176 FABP9Q0Z7S8 132 aa4.01□□□□□ -1.77
ERCC8-203ENST00000439176 COX17Q14061 63 aa4.01□□□□□ -1.77
ERCC8-203ENST00000439176 FAM229BQ4G0N7 80 aa4.01□□□□□ -1.77
ERCC8-203ENST00000439176 IGKV2-28A0A075B6P5 120 aa4□□□□□ -1.77
ERCC8-203ENST00000439176 A0A087X002 238 aa4□□□□□ -1.77
ERCC8-203ENST00000439176 IGKV2D-28P01615 120 aa4□□□□□ -1.77
ERCC8-203ENST00000439176 SEC11CQ9BY50 192 aa4□□□□□ -1.77
ERCC8-203ENST00000439176 IGLC3P0DOY3 106 aa3.99□□□□□ -1.77
ERCC8-203ENST00000439176 CTAG1AP78358 180 aa3.99□□□□□ -1.77
ERCC8-203ENST00000439176 FAM19A1Q7Z5A9 133 aa3.99□□□□□ -1.77
ERCC8-203ENST00000439176 LINC00304Q8N9R0 145 aa3.99□□□□□ -1.77
ERCC8-203ENST00000439176 ERG28Q9UKR5 140 aa3.99□□□□□ -1.77
ERCC8-203ENST00000439176 IGLV5-39A0A0G2JS06 123 aa3.98□□□□□ -1.77
ERCC8-203ENST00000439176 HBDP02042 147 aa3.98□□□□□ -1.77
ERCC8-203ENST00000439176 LINC00614P0C842 121 aa3.98□□□□□ -1.77
ERCC8-203ENST00000439176 RHEBQ15382 184 aa3.98□□□□□ -1.77
ERCC8-203ENST00000439176 KRTAP13-1Q8IUC0 172 aa3.98□□□□□ -1.77
ERCC8-203ENST00000439176 SND1-IT1Q9HBX3 110 aa3.98□□□□□ -1.77
ERCC8-203ENST00000439176 ANAPC11Q9NYG5 84 aa3.98□□□□□ -1.77
ERCC8-203ENST00000439176 ATP6V1G1O75348 118 aa3.97□□□□□ -1.77
ERCC8-203ENST00000439176 ZNF22P17026 224 aaPredicted RBP3.97□□□□□ -1.77
ERCC8-203ENST00000439176 PRLHP81277 87 aa3.97□□□□□ -1.77
ERCC8-203ENST00000439176 TMEM170BQ5T4T1 132 aa3.97□□□□□ -1.77
ERCC8-203ENST00000439176 BAGE3Q86Y29 109 aa3.97□□□□□ -1.77
ERCC8-203ENST00000439176 CBLN2Q8IUK8 224 aa3.97□□□□□ -1.77
ERCC8-203ENST00000439176 TMEM126AQ9H061 195 aa3.97□□□□□ -1.77
ERCC8-203ENST00000439176 RPS10P5Q9NQ39 176 aa3.97□□□□□ -1.77
ERCC8-203ENST00000439176 TRAPPC1Q9Y5R8 145 aa3.97□□□□□ -1.77
ERCC8-203ENST00000439176 TMEM238C9JI98 176 aa3.96□□□□□ -1.78
ERCC8-203ENST00000439176 SCO1O75880 301 aa3.96□□□□□ -1.78
ERCC8-203ENST00000439176 VPREB1P12018 145 aa3.96□□□□□ -1.78
ERCC8-203ENST00000439176 LINC00158P58513 81 aa3.96□□□□□ -1.78
ERCC8-203ENST00000439176 S100A12P80511 92 aa3.96□□□□□ -1.78
ERCC8-203ENST00000439176 KRTAP13-2Q52LG2 175 aa3.96□□□□□ -1.78
ERCC8-203ENST00000439176 SPAG11AQ6PDA7 123 aa3.96□□□□□ -1.78
ERCC8-203ENST00000439176 ZNF625Q96I27 306 aaPredicted RBP3.96□□□□□ -1.78
ERCC8-203ENST00000439176 ZNF706Q9Y5V0 76 aaPredicted RBP3.96□□□□□ -1.78
ERCC8-203ENST00000439176 MUC2Q02817 5179 aa3.96□□□□□ -1.78
ERCC8-203ENST00000439176 IGLV7-46A0A075B6I9 117 aa3.95□□□□□ -1.78
ERCC8-203ENST00000439176 LINC00587B1AMM8 73 aa3.95□□□□□ -1.78
ERCC8-203ENST00000439176 M0R378 163 aa3.95□□□□□ -1.78
ERCC8-203ENST00000439176 COMMD7Q86VX2 200 aa3.95□□□□□ -1.78
ERCC8-203ENST00000439176 C18orf32Q8TCD1 76 aa3.95□□□□□ -1.78
ERCC8-203ENST00000439176 PLEKHB2Q96CS7 222 aa3.95□□□□□ -1.78
ERCC8-203ENST00000439176 RETNLBQ9BQ08 111 aa3.95□□□□□ -1.78
ERCC8-203ENST00000439176 HIGD2AQ9BW72 106 aa3.95□□□□□ -1.78
ERCC8-203ENST00000439176 CHTOPQ9Y3Y2 248 aaKnown RBP3.95□□□□□ -1.78
ERCC8-203ENST00000439176 C11orf86A6NJI1 115 aa3.94□□□□□ -1.78
ERCC8-203ENST00000439176 NDUFA5Q16718 116 aa3.94□□□□□ -1.78
ERCC8-203ENST00000439176 TPRXLQ17RH7 258 aa3.94□□□□□ -1.78
ERCC8-203ENST00000439176 A0A096LNJ9 63 aa3.93□□□□□ -1.78
ERCC8-203ENST00000439176 PMCHL1Q16048 86 aa3.93□□□□□ -1.78
ERCC8-203ENST00000439176 MEIG1Q5JSS6 88 aa3.93□□□□□ -1.78
ERCC8-203ENST00000439176 C10orf91Q5T1B1 145 aa3.93□□□□□ -1.78
ERCC8-203ENST00000439176 MAP1LC3CQ9BXW4 147 aa3.93□□□□□ -1.78
ERCC8-203ENST00000439176 PPDPFQ9H3Y8 114 aa3.93□□□□□ -1.78
ERCC8-203ENST00000439176 A0A0U1RRA0 63 aa3.92□□□□□ -1.78
ERCC8-203ENST00000439176 SNAPINO95295 136 aa3.92□□□□□ -1.78
ERCC8-203ENST00000439176 HERV-K104P63124 156 aa3.92□□□□□ -1.78
ERCC8-203ENST00000439176 KRTAP5-11Q6L8G4 156 aa3.92□□□□□ -1.78
ERCC8-203ENST00000439176 FP248Q71RG6 208 aaPredicted RBP3.92□□□□□ -1.78
ERCC8-203ENST00000439176 BOD1L2Q8IYS8 172 aa3.92□□□□□ -1.78
ERCC8-203ENST00000439176 LINC00337Q8N6G1 96 aa3.92□□□□□ -1.78
ERCC8-203ENST00000439176 CHCHD1Q96BP2 118 aaKnown RBP3.92□□□□□ -1.78
ERCC8-203ENST00000439176 SPRR4Q96PI1 79 aa3.92□□□□□ -1.78
ERCC8-203ENST00000439176 TRAV12-1A0A0B4J245 112 aa3.91□□□□□ -1.78
ERCC8-203ENST00000439176 MYMXA0A1B0GTQ4 84 aa3.91□□□□□ -1.78
ERCC8-203ENST00000439176 ETDCA0A1B0GVM5 59 aa3.91□□□□□ -1.78
ERCC8-203ENST00000439176 TMEM223A0PJW6 202 aa3.91□□□□□ -1.78
ERCC8-203ENST00000439176 APOC3P02656 99 aa3.91□□□□□ -1.78
ERCC8-203ENST00000439176 IFITM2Q01629 132 aa3.91□□□□□ -1.78
ERCC8-203ENST00000439176 SVBPQ8N300 66 aa3.91□□□□□ -1.78
ERCC8-203ENST00000439176 C3orf22Q8N5N4 141 aa3.91□□□□□ -1.78
ERCC8-203ENST00000439176 IFI27L1Q96BM0 104 aa3.91□□□□□ -1.78
ERCC8-203ENST00000439176 URB1-AS1Q96HZ7 61 aa3.91□□□□□ -1.78
ERCC8-203ENST00000439176 NDUFA12Q9UI09 145 aa3.91□□□□□ -1.78
ERCC8-203ENST00000439176 A0A0A0MQY5 61 aa3.9□□□□□ -1.79
ERCC8-203ENST00000439176 HSBP1O75506 76 aa3.9□□□□□ -1.79
ERCC8-203ENST00000439176 SCGB1D1O95968 90 aa3.9□□□□□ -1.79
ERCC8-203ENST00000439176 SPINK1P00995 79 aa3.9□□□□□ -1.79
ERCC8-203ENST00000439176 SMIM13P0DJ93 91 aa3.9□□□□□ -1.79
ERCC8-203ENST00000439176 MIR7-3HGQ8N6C7 128 aa3.9□□□□□ -1.79
ERCC8-203ENST00000439176 KCNQ1DNQ9H478 68 aa3.9□□□□□ -1.79
ERCC8-203ENST00000439176 NCR3O14931 201 aa3.89□□□□□ -1.79
ERCC8-203ENST00000439176 KRTAP10-7P60409 375 aaPredicted RBP3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms