RNA–Protein interactions for RNA: ENST00000439120.1

AC004540.1-201, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 891 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-201ENST00000439120 IGKV2D-26A0A0A0MRZ7 120 aa10.83□□□□□ -0.68
AC004540.1-201ENST00000439120 ATP6V1G1O75348 118 aa10.82□□□□□ -0.68
AC004540.1-201ENST00000439120 KRTAP13-2Q52LG2 175 aa10.82□□□□□ -0.68
AC004540.1-201ENST00000439120 CHCHD1Q96BP2 118 aaKnown RBP10.82□□□□□ -0.68
AC004540.1-201ENST00000439120 A0A0U1RRA0 63 aa10.81□□□□□ -0.68
AC004540.1-201ENST00000439120 LINC00304Q8N9R0 145 aa10.81□□□□□ -0.68
AC004540.1-201ENST00000439120 IFI27L1Q96BM0 104 aa10.81□□□□□ -0.68
AC004540.1-201ENST00000439120 TRAV12-1A0A0B4J245 112 aa10.8□□□□□ -0.68
AC004540.1-201ENST00000439120 TMEM223A0PJW6 202 aa10.8□□□□□ -0.68
AC004540.1-201ENST00000439120 M0R378 163 aa10.8□□□□□ -0.68
AC004540.1-201ENST00000439120 CBLN2Q8IUK8 224 aa10.8□□□□□ -0.68
AC004540.1-201ENST00000439120 Q8NDZ9 215 aa10.79□□□□□ -0.68
AC004540.1-201ENST00000439120 MEIG1Q5JSS6 88 aa10.78□□□□□ -0.68
AC004540.1-201ENST00000439120 HIGD2AQ9BW72 106 aa10.77□□□□□ -0.69
AC004540.1-201ENST00000439120 HSBP1O75506 76 aa10.76□□□□□ -0.69
AC004540.1-201ENST00000439120 SMIM13P0DJ93 91 aa10.75□□□□□ -0.69
AC004540.1-201ENST00000439120 PLEKHB2Q96CS7 222 aa10.75□□□□□ -0.69
AC004540.1-201ENST00000439120 HERV-K104P63124 156 aa10.74□□□□□ -0.69
AC004540.1-201ENST00000439120 BOD1L2Q8IYS8 172 aa10.74□□□□□ -0.69
AC004540.1-201ENST00000439120 YPEL4Q96NS1 127 aa10.74□□□□□ -0.69
AC004540.1-201ENST00000439120 RETNLBQ9BQ08 111 aa10.74□□□□□ -0.69
AC004540.1-201ENST00000439120 LINC00587B1AMM8 73 aa10.73□□□□□ -0.69
AC004540.1-201ENST00000439120 H0Y8G0 127 aa10.73□□□□□ -0.69
AC004540.1-201ENST00000439120 FAM19A2Q8N3H0 131 aa10.72□□□□□ -0.69
AC004540.1-201ENST00000439120 MIR7-3HGQ8N6C7 128 aa10.72□□□□□ -0.69
AC004540.1-201ENST00000439120 A0A0U1RQV1 116 aa10.71□□□□□ -0.69
AC004540.1-201ENST00000439120 PRYO14603 147 aa10.71□□□□□ -0.69
AC004540.1-201ENST00000439120 NCR3O14931 201 aa10.71□□□□□ -0.69
AC004540.1-201ENST00000439120 MAP1LC3CQ9BXW4 147 aa10.71□□□□□ -0.69
AC004540.1-201ENST00000439120 NDUFA12Q9UI09 145 aa10.71□□□□□ -0.69
AC004540.1-201ENST00000439120 ZNF706Q9Y5V0 76 aaPredicted RBP10.71□□□□□ -0.69
AC004540.1-201ENST00000439120 MYMXA0A1B0GTQ4 84 aa10.7□□□□□ -0.7
AC004540.1-201ENST00000439120 CTAG1AP78358 180 aa10.69□□□□□ -0.7
AC004540.1-201ENST00000439120 S100A12P80511 92 aa10.69□□□□□ -0.7
AC004540.1-201ENST00000439120 C3orf22Q8N5N4 141 aa10.69□□□□□ -0.7
AC004540.1-201ENST00000439120 SPRR4Q96PI1 79 aa10.68□□□□□ -0.7
AC004540.1-201ENST00000439120 ETDCA0A1B0GVM5 59 aa10.67□□□□□ -0.7
AC004540.1-201ENST00000439120 LEPROTL1O95214 131 aa10.67□□□□□ -0.7
AC004540.1-201ENST00000439120 TRGC2P03986 189 aa10.66□□□□□ -0.7
AC004540.1-201ENST00000439120 LINC00337Q8N6G1 96 aa10.66□□□□□ -0.7
AC004540.1-201ENST00000439120 CDIP1Q9H305 208 aa10.66□□□□□ -0.7
AC004540.1-201ENST00000439120 IGLV7-46A0A075B6I9 117 aa10.65□□□□□ -0.7
AC004540.1-201ENST00000439120 C4orf48Q5BLP8 95 aa10.65□□□□□ -0.7
AC004540.1-201ENST00000439120 SPAG11AQ6PDA7 123 aa10.65□□□□□ -0.7
AC004540.1-201ENST00000439120 KCNQ1DNQ9H478 68 aa10.65□□□□□ -0.7
AC004540.1-201ENST00000439120 PLNP26678 52 aa10.64□□□□□ -0.71
AC004540.1-201ENST00000439120 MUC2Q02817 5179 aa10.63□□□□□ -0.71
AC004540.1-201ENST00000439120 TRBV10-3A0A0K0K1G6 114 aa10.63□□□□□ -0.71
AC004540.1-201ENST00000439120 LEPROTO15243 131 aa10.63□□□□□ -0.71
AC004540.1-201ENST00000439120 SERF1AO75920 110 aa10.63□□□□□ -0.71
AC004540.1-201ENST00000439120 HERVK_113P61574 105 aa10.63□□□□□ -0.71
AC004540.1-201ENST00000439120 HSPB8Q9UJY1 196 aa10.63□□□□□ -0.71
AC004540.1-201ENST00000439120 SPRR1AP35321 89 aa10.62□□□□□ -0.71
AC004540.1-201ENST00000439120 TPRXLQ17RH7 258 aa10.62□□□□□ -0.71
AC004540.1-201ENST00000439120 SMCR5Q8TEV8 140 aa10.62□□□□□ -0.71
AC004540.1-201ENST00000439120 TSPEAR-AS2P59090 65 aa10.61□□□□□ -0.71
AC004540.1-201ENST00000439120 DAND5Q8N907 189 aa10.61□□□□□ -0.71
AC004540.1-201ENST00000439120 MIEN1Q9BRT3 115 aa10.61□□□□□ -0.71
AC004540.1-201ENST00000439120 J3QQQ9 107 aa10.6□□□□□ -0.71
AC004540.1-201ENST00000439120 DPM2O94777 84 aa10.6□□□□□ -0.71
AC004540.1-201ENST00000439120 FABP4P15090 132 aa10.6□□□□□ -0.71
AC004540.1-201ENST00000439120 PPDPFQ9H3Y8 114 aa10.6□□□□□ -0.71
AC004540.1-201ENST00000439120 LGALS3P17931 250 aaKnown RBP10.59□□□□□ -0.71
AC004540.1-201ENST00000439120 DDTP30046 118 aa10.58□□□□□ -0.72
AC004540.1-201ENST00000439120 NMUP48645 174 aa10.58□□□□□ -0.72
AC004540.1-201ENST00000439120 Q8NBF4 154 aa10.58□□□□□ -0.72
AC004540.1-201ENST00000439120 TRBV10-2A0A0K0K1G8 114 aa10.57□□□□□ -0.72
AC004540.1-201ENST00000439120 KRTAP4-16G5E9R7 235 aaPredicted RBP10.57□□□□□ -0.72
AC004540.1-201ENST00000439120 IGKCP01834 107 aa10.57□□□□□ -0.72
AC004540.1-201ENST00000439120 LINC00310P59036 64 aa10.57□□□□□ -0.72
AC004540.1-201ENST00000439120 PMCHL2Q9BQD1 86 aa10.57□□□□□ -0.72
AC004540.1-201ENST00000439120 LOC107984156A0A0G2JMH3 177 aa10.56□□□□□ -0.72
AC004540.1-201ENST00000439120 S100A7L2Q5SY68 101 aa10.56□□□□□ -0.72
AC004540.1-201ENST00000439120 GAGE2AQ6NT46 116 aa10.56□□□□□ -0.72
AC004540.1-201ENST00000439120 ARL17AQ8IVW1 177 aa10.56□□□□□ -0.72
AC004540.1-201ENST00000439120 SPANXB1Q9NS25 103 aaPredicted RBP10.56□□□□□ -0.72
AC004540.1-201ENST00000439120 B5MCH6 92 aa10.55□□□□□ -0.72
AC004540.1-201ENST00000439120 FP248Q71RG6 208 aaPredicted RBP10.54□□□□□ -0.72
AC004540.1-201ENST00000439120 LINC00483Q53H64 154 aa10.53□□□□□ -0.72
AC004540.1-201ENST00000439120 IGLV9-49A0A0B4J1Y8 123 aa10.52□□□□□ -0.73
AC004540.1-201ENST00000439120 SPINK1P00995 79 aa10.52□□□□□ -0.73
AC004540.1-201ENST00000439120 NDUFC2O95298 119 aa10.51□□□□□ -0.73
AC004540.1-201ENST00000439120 Q6ZRX8 168 aa10.51□□□□□ -0.73
AC004540.1-201ENST00000439120 NPC2P61916 151 aa10.5□□□□□ -0.73
AC004540.1-201ENST00000439120 MOBPQ13875 183 aa10.5□□□□□ -0.73
AC004540.1-201ENST00000439120 ERC2-IT1O76042 136 aa10.49□□□□□ -0.73
AC004540.1-201ENST00000439120 JOSD1Q15040 202 aaPredicted RBP10.49□□□□□ -0.73
AC004540.1-201ENST00000439120 TRAV23DV6A0A075B6W5 121 aa10.48□□□□□ -0.73
AC004540.1-201ENST00000439120 COLCA2A8K830 154 aa10.48□□□□□ -0.73
AC004540.1-201ENST00000439120 IGLV6-57P01721 117 aa10.48□□□□□ -0.73
AC004540.1-201ENST00000439120 SLC7A5P1Q8MH63 180 aa10.48□□□□□ -0.73
AC004540.1-201ENST00000439120 Q9BRP9 147 aa10.48□□□□□ -0.73
AC004540.1-201ENST00000439120 A0A0J9YXY3 114 aa10.47□□□□□ -0.73
AC004540.1-201ENST00000439120 E9PLD3 99 aa10.46□□□□□ -0.73
AC004540.1-201ENST00000439120 SSBP3-AS1Q7Z2R9 100 aa10.46□□□□□ -0.73
AC004540.1-201ENST00000439120 CBY1Q9Y3M2 126 aa10.46□□□□□ -0.73
AC004540.1-201ENST00000439120 HINT1P49773 126 aaPredicted RBP10.45□□□□□ -0.74
AC004540.1-201ENST00000439120 ZNF73O43830 326 aaPredicted RBP10.44□□□□□ -0.74
AC004540.1-201ENST00000439120 ADAMTSL4-AS1Q5T5F5 129 aa10.44□□□□□ -0.74
AC004540.1-201ENST00000439120 SOSTDC1Q6X4U4 206 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms