RNA–Protein interactions for RNA: ENST00000439029.5

SMPD4-208, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-208ENST00000439029 SEC11AP67812 179 aa5.08□□□□□ -1.6
SMPD4-208ENST00000439029 FAM74A3Q4VXF1 159 aa5.08□□□□□ -1.6
SMPD4-208ENST00000439029 TMEM136Q6ZRR5 245 aa5.08□□□□□ -1.6
SMPD4-208ENST00000439029 ZNF625Q96I27 306 aaPredicted RBP5.08□□□□□ -1.6
SMPD4-208ENST00000439029 PRELID3AQ96N28 172 aa5.08□□□□□ -1.6
SMPD4-208ENST00000439029 SMIM7Q9BQ49 75 aa5.08□□□□□ -1.6
SMPD4-208ENST00000439029 HMSDA8MTL9 139 aa5.07□□□□□ -1.6
SMPD4-208ENST00000439029 ETDCA0A1B0GVM5 59 aa5.06□□□□□ -1.6
SMPD4-208ENST00000439029 MT1FP04733 61 aa5.06□□□□□ -1.6
SMPD4-208ENST00000439029 ORMDL3Q8N138 153 aa5.06□□□□□ -1.6
SMPD4-208ENST00000439029 ERG28Q9UKR5 140 aa5.06□□□□□ -1.6
SMPD4-208ENST00000439029 F8W036 122 aa5.05□□□□□ -1.6
SMPD4-208ENST00000439029 PPBPP02775 128 aa5.05□□□□□ -1.6
SMPD4-208ENST00000439029 KRTAP9-3Q9BYQ3 159 aa5.05□□□□□ -1.6
SMPD4-208ENST00000439029 SMIM27A0A1W2PRY6 76 aa5.04□□□□□ -1.6
SMPD4-208ENST00000439029 PRYO14603 147 aa5.04□□□□□ -1.6
SMPD4-208ENST00000439029 KRTAP20-1Q3LI63 56 aa5.04□□□□□ -1.6
SMPD4-208ENST00000439029 CHTOPQ9Y3Y2 248 aaKnown RBP5.04□□□□□ -1.6
SMPD4-208ENST00000439029 A0A0U1RRA0 63 aa5.03□□□□□ -1.6
SMPD4-208ENST00000439029 TINCRA0A1B0GVN0 87 aa5.03□□□□□ -1.6
SMPD4-208ENST00000439029 A0A1B0GW15 77 aa5.03□□□□□ -1.6
SMPD4-208ENST00000439029 NCR3O14931 201 aa5.03□□□□□ -1.6
SMPD4-208ENST00000439029 SPRR1AP35321 89 aa5.03□□□□□ -1.6
SMPD4-208ENST00000439029 Q8N8P6 123 aa5.03□□□□□ -1.6
SMPD4-208ENST00000439029 MAP1LC3AQ9H492 121 aa5.03□□□□□ -1.6
SMPD4-208ENST00000439029 LINC00846Q9NV44 126 aa5.03□□□□□ -1.6
SMPD4-208ENST00000439029 IGLV5-45A0A087WSX0 123 aa5.02□□□□□ -1.61
SMPD4-208ENST00000439029 A0A1B0GXF2 115 aa5.02□□□□□ -1.61
SMPD4-208ENST00000439029 ADCYAP1P18509 176 aa5.02□□□□□ -1.61
SMPD4-208ENST00000439029 KRTAP19-6Q3LI70 58 aa5.02□□□□□ -1.61
SMPD4-208ENST00000439029 KIAA1644Q3SXP7 199 aa5.02□□□□□ -1.61
SMPD4-208ENST00000439029 S100A8P05109 93 aa5.01□□□□□ -1.61
SMPD4-208ENST00000439029 KRTAP10-10P60014 251 aa5.01□□□□□ -1.61
SMPD4-208ENST00000439029 ADIRFQ15847 76 aa5.01□□□□□ -1.61
SMPD4-208ENST00000439029 ORMDL2Q53FV1 153 aa5.01□□□□□ -1.61
SMPD4-208ENST00000439029 PAPPA-AS1Q5QFB9 102 aa5.01□□□□□ -1.61
SMPD4-208ENST00000439029 LIMD2Q9BT23 127 aa5.01□□□□□ -1.61
SMPD4-208ENST00000439029 PRSS47A8MTI9 375 aa5□□□□□ -1.61
SMPD4-208ENST00000439029 B5MCH6 92 aa5□□□□□ -1.61
SMPD4-208ENST00000439029 RPL23P62829 140 aaKnown RBP5□□□□□ -1.61
SMPD4-208ENST00000439029 Q9BRP9 147 aa5□□□□□ -1.61
SMPD4-208ENST00000439029 KCNQ1DNQ9H478 68 aa5□□□□□ -1.61
SMPD4-208ENST00000439029 TRBV10-3A0A0K0K1G6 114 aa4.99□□□□□ -1.61
SMPD4-208ENST00000439029 H7C2G1 150 aa4.99□□□□□ -1.61
SMPD4-208ENST00000439029 GHRHP01286 108 aa4.99□□□□□ -1.61
SMPD4-208ENST00000439029 LINC00158P58513 81 aa4.99□□□□□ -1.61
SMPD4-208ENST00000439029 ST20-AS1Q8NBB2 130 aa4.99□□□□□ -1.61
SMPD4-208ENST00000439029 SCGB3A1Q96QR1 104 aa4.99□□□□□ -1.61
SMPD4-208ENST00000439029 SRP19P09132 144 aaKnown RBP4.98□□□□□ -1.61
SMPD4-208ENST00000439029 COX17Q14061 63 aa4.98□□□□□ -1.61
SMPD4-208ENST00000439029 BOD1L2Q8IYS8 172 aa4.98□□□□□ -1.61
SMPD4-208ENST00000439029 TOMM6Q96B49 74 aa4.98□□□□□ -1.61
SMPD4-208ENST00000439029 CST9LQ9H4G1 147 aa4.98□□□□□ -1.61
SMPD4-208ENST00000439029 MUC12Q9UKN1 5478 aa4.98□□□□□ -1.61
SMPD4-208ENST00000439029 H3BRM9 83 aa4.97□□□□□ -1.61
SMPD4-208ENST00000439029 MRPL18Q9H0U6 180 aaKnown RBP4.97□□□□□ -1.61
SMPD4-208ENST00000439029 TRAV9-1A0A075B6T8 112 aa4.96□□□□□ -1.62
SMPD4-208ENST00000439029 IGLV5-39A0A0G2JS06 123 aa4.96□□□□□ -1.62
SMPD4-208ENST00000439029 TMEM238LA0A1B0GVL6 79 aa4.96□□□□□ -1.62
SMPD4-208ENST00000439029 PMVKQ15126 192 aa4.96□□□□□ -1.62
SMPD4-208ENST00000439029 ERASQ7Z444 233 aa4.96□□□□□ -1.62
SMPD4-208ENST00000439029 LAMTOR2Q9Y2Q5 125 aa4.96□□□□□ -1.62
SMPD4-208ENST00000439029 C20orf202A1L168 122 aa4.94□□□□□ -1.62
SMPD4-208ENST00000439029 C1orf195Q5TG92 126 aa4.94□□□□□ -1.62
SMPD4-208ENST00000439029 SLC51BQ86UW2 128 aa4.94□□□□□ -1.62
SMPD4-208ENST00000439029 BLOC1S1P78537 153 aa4.93□□□□□ -1.62
SMPD4-208ENST00000439029 ALKAL2Q6UX46 152 aa4.93□□□□□ -1.62
SMPD4-208ENST00000439029 Q6ZRX8 168 aa4.93□□□□□ -1.62
SMPD4-208ENST00000439029 NXT2Q9NPJ8 142 aaKnown RBP4.93□□□□□ -1.62
SMPD4-208ENST00000439029 K7EMI3 77 aa4.92□□□□□ -1.62
SMPD4-208ENST00000439029 SMIM13P0DJ93 91 aa4.92□□□□□ -1.62
SMPD4-208ENST00000439029 ZNF22P17026 224 aaPredicted RBP4.92□□□□□ -1.62
SMPD4-208ENST00000439029 NAT8Q9UHE5 227 aa4.92□□□□□ -1.62
SMPD4-208ENST00000439029 ATP6V1G1O75348 118 aa4.91□□□□□ -1.62
SMPD4-208ENST00000439029 LGALS3P17931 250 aaKnown RBP4.91□□□□□ -1.62
SMPD4-208ENST00000439029 G0S2P27469 103 aa4.91□□□□□ -1.62
SMPD4-208ENST00000439029 NDUFA6P56556 154 aa4.91□□□□□ -1.62
SMPD4-208ENST00000439029 S100A12P80511 92 aa4.91□□□□□ -1.62
SMPD4-208ENST00000439029 ATP11AUNQ6ZP68 121 aa4.91□□□□□ -1.62
SMPD4-208ENST00000439029 A0A0G2JQZ4 141 aa4.9□□□□□ -1.63
SMPD4-208ENST00000439029 C9JQL5 133 aa4.9□□□□□ -1.63
SMPD4-208ENST00000439029 IGLC3P0DOY3 106 aa4.9□□□□□ -1.63
SMPD4-208ENST00000439029 ATP5L2Q7Z4Y8 100 aa4.9□□□□□ -1.63
SMPD4-208ENST00000439029 DDTP30046 118 aa4.89□□□□□ -1.63
SMPD4-208ENST00000439029 RGS21Q2M5E4 152 aa4.89□□□□□ -1.63
SMPD4-208ENST00000439029 MIR7-3HGQ8N6C7 128 aa4.89□□□□□ -1.63
SMPD4-208ENST00000439029 MEIG1Q5JSS6 88 aa4.88□□□□□ -1.63
SMPD4-208ENST00000439029 EIF4EBP3O60516 100 aaPredicted RBP4.87□□□□□ -1.63
SMPD4-208ENST00000439029 SMIM29Q86T20 159 aa4.87□□□□□ -1.63
SMPD4-208ENST00000439029 C11orf86A6NJI1 115 aa4.86□□□□□ -1.63
SMPD4-208ENST00000439029 Q1RN00 199 aa4.86□□□□□ -1.63
SMPD4-208ENST00000439029 TMEM170BQ5T4T1 132 aa4.86□□□□□ -1.63
SMPD4-208ENST00000439029 TRBV20-1A0A075B6N2 111 aa4.85□□□□□ -1.63
SMPD4-208ENST00000439029 JOSD1Q15040 202 aaPredicted RBP4.85□□□□□ -1.63
SMPD4-208ENST00000439029 C20orf166-AS1Q96NR2 134 aa4.85□□□□□ -1.63
SMPD4-208ENST00000439029 LAMTOR3Q9UHA4 124 aa4.85□□□□□ -1.63
SMPD4-208ENST00000439029 FAM236DA0A1B0GTK5 79 aa4.84□□□□□ -1.63
SMPD4-208ENST00000439029 FAM236CP0DP71 79 aa4.84□□□□□ -1.63
SMPD4-208ENST00000439029 CD164Q04900 197 aa4.84□□□□□ -1.63
SMPD4-208ENST00000439029 SFTA2Q6UW10 78 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms