RNA–Protein interactions for RNA: ENST00000438518.5

HDAC6-208, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-208ENST00000438518 SPANXDQ9BXN6 97 aa11.65□□□□□ -0.54
HDAC6-208ENST00000438518 SPANXCQ9NY87 97 aa11.65□□□□□ -0.54
HDAC6-208ENST00000438518 APOBP04114 4563 aaKnown RBP11.65□□□□□ -0.55
HDAC6-208ENST00000438518 RPL24P83731 157 aaKnown RBP11.64□□□□□ -0.55
HDAC6-208ENST00000438518 SLC25A34Q6PIV7 304 aa11.64□□□□□ -0.55
HDAC6-208ENST00000438518 PPDPFQ9H3Y8 114 aa11.64□□□□□ -0.55
HDAC6-208ENST00000438518 XGP55808 180 aa11.63□□□□□ -0.55
HDAC6-208ENST00000438518 A0A1W2PNN7 141 aa11.62□□□□□ -0.55
HDAC6-208ENST00000438518 C14orf144Q96I85 54 aa11.62□□□□□ -0.55
HDAC6-208ENST00000438518 SPANXB1Q9NS25 103 aaPredicted RBP11.62□□□□□ -0.55
HDAC6-208ENST00000438518 IGLV5-37A0A075B6J1 123 aa11.61□□□□□ -0.55
HDAC6-208ENST00000438518 IFITM1P13164 125 aa11.61□□□□□ -0.55
HDAC6-208ENST00000438518 ADAMTSL4-AS1Q5T5F5 129 aa11.61□□□□□ -0.55
HDAC6-208ENST00000438518 DAND5Q8N907 189 aa11.61□□□□□ -0.55
HDAC6-208ENST00000438518 TP73-AS1Q9UF72 201 aa11.61□□□□□ -0.55
HDAC6-208ENST00000438518 FAM168BA1KXE4 195 aa11.59□□□□□ -0.55
HDAC6-208ENST00000438518 FAM19A5Q7Z5A7 132 aaPredicted RBP11.59□□□□□ -0.55
HDAC6-208ENST00000438518 HIGD1BQ9P298 99 aa11.59□□□□□ -0.55
HDAC6-208ENST00000438518 M0QXV9 152 aa11.58□□□□□ -0.56
HDAC6-208ENST00000438518 NDUFC2O95298 119 aa11.58□□□□□ -0.56
HDAC6-208ENST00000438518 SERTAD4-AS1Q5TG53 156 aa11.58□□□□□ -0.56
HDAC6-208ENST00000438518 NKAPP1Q8N9T2 125 aa11.58□□□□□ -0.56
HDAC6-208ENST00000438518 LINC00308Q8TCZ7 52 aa11.58□□□□□ -0.56
HDAC6-208ENST00000438518 BIRC6Q9NR09 4857 aa11.58□□□□□ -0.56
HDAC6-208ENST00000438518 VPREB1P12018 145 aa11.57□□□□□ -0.56
HDAC6-208ENST00000438518 LBHQ53QV2 105 aaPredicted RBP11.57□□□□□ -0.56
HDAC6-208ENST00000438518 C7orf33Q8WU49 177 aa11.57□□□□□ -0.56
HDAC6-208ENST00000438518 SRSF9Q13242 221 aaKnown RBP eCLIP11.56□□□□□ -0.56
HDAC6-208ENST00000438518 KRTAP7-1Q8IUC3 87 aa11.56□□□□□ -0.56
HDAC6-208ENST00000438518 UQCR10Q9UDW1 63 aa11.56□□□□□ -0.56
HDAC6-208ENST00000438518 C22orf24Q9Y442 160 aa11.56□□□□□ -0.56
HDAC6-208ENST00000438518 MRPL55Q7Z7F7 128 aaKnown RBP11.55□□□□□ -0.56
HDAC6-208ENST00000438518 TRBV10-2A0A0K0K1G8 114 aa11.54□□□□□ -0.56
HDAC6-208ENST00000438518 HAMPP81172 84 aa11.54□□□□□ -0.56
HDAC6-208ENST00000438518 SOSTDC1Q6X4U4 206 aa11.54□□□□□ -0.56
HDAC6-208ENST00000438518 C12orf57Q99622 126 aa11.54□□□□□ -0.56
HDAC6-208ENST00000438518 NPC2P61916 151 aa11.53□□□□□ -0.56
HDAC6-208ENST00000438518 RYR1P21817 5038 aa11.52□□□□□ -0.56
HDAC6-208ENST00000438518 M0R378 163 aa11.52□□□□□ -0.57
HDAC6-208ENST00000438518 TAL2Q16559 108 aa11.52□□□□□ -0.57
HDAC6-208ENST00000438518 C2orf91Q6ZV80 131 aa11.52□□□□□ -0.57
HDAC6-208ENST00000438518 KIAA1109Q2LD37 5005 aa11.52□□□□□ -0.57
HDAC6-208ENST00000438518 PHF5AQ7RTV0 110 aaKnown RBP11.51□□□□□ -0.57
HDAC6-208ENST00000438518 HIST1H4GQ99525 98 aa11.51□□□□□ -0.57
HDAC6-208ENST00000438518 MUSTN1Q8IVN3 82 aa11.5□□□□□ -0.57
HDAC6-208ENST00000438518 LINC00518Q8N0U6 118 aa11.5□□□□□ -0.57
HDAC6-208ENST00000438518 Q8NDZ9 215 aa11.5□□□□□ -0.57
HDAC6-208ENST00000438518 UBE2BP63146 152 aa11.49□□□□□ -0.57
HDAC6-208ENST00000438518 TSTD3H0UI37 97 aa11.48□□□□□ -0.57
HDAC6-208ENST00000438518 EIF4EBP3O60516 100 aaPredicted RBP11.48□□□□□ -0.57
HDAC6-208ENST00000438518 LINC00528Q8N1L1 170 aa11.48□□□□□ -0.57
HDAC6-208ENST00000438518 LINC00167Q96N53 147 aa11.48□□□□□ -0.57
HDAC6-208ENST00000438518 HSPG2P98160 4391 aa11.48□□□□□ -0.57
HDAC6-208ENST00000438518 FAM229AH3BQW9 127 aa11.47□□□□□ -0.57
HDAC6-208ENST00000438518 CBY1Q9Y3M2 126 aa11.47□□□□□ -0.57
HDAC6-208ENST00000438518 NCR3O14931 201 aa11.46□□□□□ -0.57
HDAC6-208ENST00000438518 IGLV1-50A0A075B6I6 118 aa11.45□□□□□ -0.58
HDAC6-208ENST00000438518 SMR3BP02814 79 aaPredicted RBP11.45□□□□□ -0.58
HDAC6-208ENST00000438518 HNRNPA3P51991 378 aaKnown RBP11.45□□□□□ -0.58
HDAC6-208ENST00000438518 PLA2G1BP04054 148 aaKnown RBP11.44□□□□□ -0.58
HDAC6-208ENST00000438518 HSD52Q0P140 79 aa11.44□□□□□ -0.58
HDAC6-208ENST00000438518 S100A7L2Q5SY68 101 aa11.44□□□□□ -0.58
HDAC6-208ENST00000438518 Q8N1X5 172 aa11.44□□□□□ -0.58
HDAC6-208ENST00000438518 PRO1933Q9H354 126 aa11.44□□□□□ -0.58
HDAC6-208ENST00000438518 GAGE10A6NGK3 116 aa11.43□□□□□ -0.58
HDAC6-208ENST00000438518 RPL37AP61513 92 aaKnown RBP11.43□□□□□ -0.58
HDAC6-208ENST00000438518 PRR3P79522 188 aaKnown RBP11.43□□□□□ -0.58
HDAC6-208ENST00000438518 CEND1Q8N111 149 aa11.43□□□□□ -0.58
HDAC6-208ENST00000438518 IGKV2-28A0A075B6P5 120 aa11.42□□□□□ -0.58
HDAC6-208ENST00000438518 TMEM238LA0A1B0GVL6 79 aa11.42□□□□□ -0.58
HDAC6-208ENST00000438518 A4D1N5 150 aa11.42□□□□□ -0.58
HDAC6-208ENST00000438518 A6NJY4 79 aa11.42□□□□□ -0.58
HDAC6-208ENST00000438518 IGKV2D-28P01615 120 aa11.42□□□□□ -0.58
HDAC6-208ENST00000438518 DDTP30046 118 aa11.42□□□□□ -0.58
HDAC6-208ENST00000438518 TMEM126AQ9H061 195 aa11.42□□□□□ -0.58
HDAC6-208ENST00000438518 TRAV13-2A0A0B4J235 113 aa11.41□□□□□ -0.58
HDAC6-208ENST00000438518 RPL37AP8A6NKH3 93 aa11.41□□□□□ -0.58
HDAC6-208ENST00000438518 PRYO14603 147 aa11.41□□□□□ -0.58
HDAC6-208ENST00000438518 IGLV6-57P01721 117 aa11.41□□□□□ -0.58
HDAC6-208ENST00000438518 PSORS1C2Q9UIG4 136 aa11.41□□□□□ -0.58
HDAC6-208ENST00000438518 TRBV10-3A0A0K0K1G6 114 aa11.4□□□□□ -0.58
HDAC6-208ENST00000438518 Q5VSD8 79 aa11.4□□□□□ -0.58
HDAC6-208ENST00000438518 KCNQ1DNQ9H478 68 aa11.4□□□□□ -0.58
HDAC6-208ENST00000438518 FAT1Q14517 4588 aa11.38□□□□□ -0.59
HDAC6-208ENST00000438518 REG3GQ6UW15 175 aa11.38□□□□□ -0.59
HDAC6-208ENST00000438518 LINC00337Q8N6G1 96 aa11.38□□□□□ -0.59
HDAC6-208ENST00000438518 OR13C6PQ8NH95 151 aa11.38□□□□□ -0.59
HDAC6-208ENST00000438518 C1orf137Q5JT78 98 aa11.37□□□□□ -0.59
HDAC6-208ENST00000438518 KRTAP11-1Q8IUC1 163 aa11.37□□□□□ -0.59
HDAC6-208ENST00000438518 TRAV23DV6A0A075B6W5 121 aa11.35□□□□□ -0.59
HDAC6-208ENST00000438518 A0A0B4J2C4 111 aa11.35□□□□□ -0.59
HDAC6-208ENST00000438518 A6NDN8 102 aa11.35□□□□□ -0.59
HDAC6-208ENST00000438518 BCE1O60756 84 aa11.35□□□□□ -0.59
HDAC6-208ENST00000438518 SPRR1AP35321 89 aa11.34□□□□□ -0.59
HDAC6-208ENST00000438518 KRTAP10-4P60372 401 aaPredicted RBP11.33□□□□□ -0.6
HDAC6-208ENST00000438518 HERC2O95714 4834 aa11.32□□□□□ -0.6
HDAC6-208ENST00000438518 M0R143 59 aa11.32□□□□□ -0.6
HDAC6-208ENST00000438518 IGLV7-43P04211 117 aa11.32□□□□□ -0.6
HDAC6-208ENST00000438518 FXYD2P54710 66 aa11.32□□□□□ -0.6
HDAC6-208ENST00000438518 RAB37Q96AX2 223 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms