RNA–Protein interactions for RNA: ENST00000438462.1

RTN4-211, Transcript of reticulon 4, humanhuman

TSL 5

Gene RTN4, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-211ENST00000438462 PFDN1O60925 122 aa5.06□□□□□ -1.6
RTN4-211ENST00000438462 PET100P0DJ07 73 aa5.06□□□□□ -1.6
RTN4-211ENST00000438462 RAB4AP20338 218 aa5.06□□□□□ -1.6
RTN4-211ENST00000438462 LCE5AQ5TCM9 118 aa5.06□□□□□ -1.6
RTN4-211ENST00000438462 TMEM141Q96I45 108 aa5.06□□□□□ -1.6
RTN4-211ENST00000438462 Q9BRP9 147 aa5.06□□□□□ -1.6
RTN4-211ENST00000438462 CDKN2A-AS1Q9UH64 79 aa5.06□□□□□ -1.6
RTN4-211ENST00000438462 RAB5AP20339 215 aa5.05□□□□□ -1.6
RTN4-211ENST00000438462 AMN1Q8IY45 258 aa5.05□□□□□ -1.6
RTN4-211ENST00000438462 C2orf88Q9BSF0 95 aa5.05□□□□□ -1.6
RTN4-211ENST00000438462 B5MCH6 92 aa5.04□□□□□ -1.6
RTN4-211ENST00000438462 GIPP09681 153 aaPredicted RBP5.04□□□□□ -1.6
RTN4-211ENST00000438462 CD164Q04900 197 aa5.04□□□□□ -1.6
RTN4-211ENST00000438462 PCP2Q8IVA1 136 aa5.04□□□□□ -1.6
RTN4-211ENST00000438462 COX7B2Q8TF08 81 aa5.04□□□□□ -1.6
RTN4-211ENST00000438462 KRTAP19-4Q3LI73 84 aa5.03□□□□□ -1.6
RTN4-211ENST00000438462 NUDT10Q8NFP7 164 aa5.03□□□□□ -1.6
RTN4-211ENST00000438462 NUDT11Q96G61 164 aa5.03□□□□□ -1.6
RTN4-211ENST00000438462 TRAV9-1A0A075B6T8 112 aa5.02□□□□□ -1.61
RTN4-211ENST00000438462 H2BFSP57053 126 aa5.02□□□□□ -1.61
RTN4-211ENST00000438462 KCNQ1DNQ9H478 68 aa5.02□□□□□ -1.61
RTN4-211ENST00000438462 NDUFA13Q9P0J0 144 aa5.02□□□□□ -1.61
RTN4-211ENST00000438462 SMIM1B2RUZ4 78 aa5.01□□□□□ -1.61
RTN4-211ENST00000438462 TCAPO15273 167 aa5.01□□□□□ -1.61
RTN4-211ENST00000438462 PPP1R17O96001 155 aa5.01□□□□□ -1.61
RTN4-211ENST00000438462 GNG4P50150 75 aa5□□□□□ -1.61
RTN4-211ENST00000438462 AKR1C8PQ5T2L2 129 aa5□□□□□ -1.61
RTN4-211ENST00000438462 ST20-AS1Q8NBB2 130 aa5□□□□□ -1.61
RTN4-211ENST00000438462 ATP5LO75964 103 aa4.99□□□□□ -1.61
RTN4-211ENST00000438462 HERVK_113P63121 156 aa4.99□□□□□ -1.61
RTN4-211ENST00000438462 A0A1B0GV50 99 aa4.98□□□□□ -1.61
RTN4-211ENST00000438462 SMIM12Q96EX1 92 aa4.98□□□□□ -1.61
RTN4-211ENST00000438462 Q6ZRX8 168 aa4.97□□□□□ -1.61
RTN4-211ENST00000438462 C11orf52Q96A22 123 aa4.97□□□□□ -1.61
RTN4-211ENST00000438462 ZNF625Q96I27 306 aaPredicted RBP4.97□□□□□ -1.61
RTN4-211ENST00000438462 Q96NJ1 140 aa4.97□□□□□ -1.61
RTN4-211ENST00000438462 SMIM2Q9BVW6 85 aa4.97□□□□□ -1.61
RTN4-211ENST00000438462 KRTAP16-1A8MUX0 517 aa4.96□□□□□ -1.62
RTN4-211ENST00000438462 NCR3O14931 201 aa4.96□□□□□ -1.62
RTN4-211ENST00000438462 LYRM1O43325 122 aa4.96□□□□□ -1.62
RTN4-211ENST00000438462 S100A5P33763 92 aa4.96□□□□□ -1.62
RTN4-211ENST00000438462 PDZD11Q5EBL8 140 aa4.96□□□□□ -1.62
RTN4-211ENST00000438462 ALKAL2Q6UX46 152 aa4.96□□□□□ -1.62
RTN4-211ENST00000438462 AMELXQ99217 191 aa4.96□□□□□ -1.62
RTN4-211ENST00000438462 BIN3Q9NQY0 253 aa4.96□□□□□ -1.62
RTN4-211ENST00000438462 PLA2G10O15496 165 aa4.95□□□□□ -1.62
RTN4-211ENST00000438462 KRTAP19-8Q3LI54 63 aa4.95□□□□□ -1.62
RTN4-211ENST00000438462 IGFL1Q6UW32 110 aa4.95□□□□□ -1.62
RTN4-211ENST00000438462 C20orf78Q9BR46 151 aa4.95□□□□□ -1.62
RTN4-211ENST00000438462 IMUPQ9GZP8 106 aa4.95□□□□□ -1.62
RTN4-211ENST00000438462 ERG28Q9UKR5 140 aa4.95□□□□□ -1.62
RTN4-211ENST00000438462 BORCS7-ASMTA0A0B4J1R7 106 aa4.94□□□□□ -1.62
RTN4-211ENST00000438462 A8MUU9 505 aa4.94□□□□□ -1.62
RTN4-211ENST00000438462 IL7P13232 177 aa4.94□□□□□ -1.62
RTN4-211ENST00000438462 CCL20P78556 96 aa4.94□□□□□ -1.62
RTN4-211ENST00000438462 RPL7L1Q6DKI1 246 aaKnown RBP4.94□□□□□ -1.62
RTN4-211ENST00000438462 C2orf66Q6UXQ4 117 aa4.94□□□□□ -1.62
RTN4-211ENST00000438462 MTURNQ8N3F0 131 aa4.94□□□□□ -1.62
RTN4-211ENST00000438462 BORCS7Q96B45 105 aa4.94□□□□□ -1.62
RTN4-211ENST00000438462 TRBV10-3A0A0K0K1G6 114 aa4.93□□□□□ -1.62
RTN4-211ENST00000438462 ATP6V1G2O95670 118 aa4.93□□□□□ -1.62
RTN4-211ENST00000438462 KCNRGQ8N5I3 272 aa4.93□□□□□ -1.62
RTN4-211ENST00000438462 VCX2Q9H322 139 aa4.93□□□□□ -1.62
RTN4-211ENST00000438462 MT4P47944 62 aa4.92□□□□□ -1.62
RTN4-211ENST00000438462 SEC11AP67812 179 aa4.92□□□□□ -1.62
RTN4-211ENST00000438462 PRO1933Q9H354 126 aa4.92□□□□□ -1.62
RTN4-211ENST00000438462 SPINK8P0C7L1 97 aa4.91□□□□□ -1.62
RTN4-211ENST00000438462 SLC25A34Q6PIV7 304 aa4.91□□□□□ -1.62
RTN4-211ENST00000438462 NOTCH2NLQ7Z3S9 236 aa4.91□□□□□ -1.62
RTN4-211ENST00000438462 TRBV24-1A0A075B6N3 115 aa4.9□□□□□ -1.63
RTN4-211ENST00000438462 A0A1B0GUT8 65 aa4.9□□□□□ -1.63
RTN4-211ENST00000438462 MRPL51Q4U2R6 128 aaKnown RBP4.9□□□□□ -1.63
RTN4-211ENST00000438462 KRTAP5-3Q6L8H2 238 aa4.9□□□□□ -1.63
RTN4-211ENST00000438462 LAMTOR3Q9UHA4 124 aa4.9□□□□□ -1.63
RTN4-211ENST00000438462 LOC389332A0A1B0GUA5 103 aa4.89□□□□□ -1.63
RTN4-211ENST00000438462 TCL1BO95988 128 aa4.89□□□□□ -1.63
RTN4-211ENST00000438462 SPRR1BP22528 89 aa4.89□□□□□ -1.63
RTN4-211ENST00000438462 COX17Q14061 63 aa4.89□□□□□ -1.63
RTN4-211ENST00000438462 ENKURQ8TC29 256 aa4.89□□□□□ -1.63
RTN4-211ENST00000438462 SFT2D1Q8WV19 159 aa4.89□□□□□ -1.63
RTN4-211ENST00000438462 K7EN84 100 aa4.88□□□□□ -1.63
RTN4-211ENST00000438462 S100A12P80511 92 aa4.88□□□□□ -1.63
RTN4-211ENST00000438462 HIGD1CA8MV81 97 aa4.85□□□□□ -1.63
RTN4-211ENST00000438462 GATCO43716 136 aaKnown RBP4.85□□□□□ -1.63
RTN4-211ENST00000438462 CKS2P33552 79 aa4.84□□□□□ -1.63
RTN4-211ENST00000438462 JOSD1Q15040 202 aaPredicted RBP4.84□□□□□ -1.63
RTN4-211ENST00000438462 BOD1L2Q8IYS8 172 aa4.84□□□□□ -1.63
RTN4-211ENST00000438462 IGLV5-45A0A087WSX0 123 aa4.83□□□□□ -1.64
RTN4-211ENST00000438462 FAM240BA0A1B0GVZ2 78 aa4.83□□□□□ -1.64
RTN4-211ENST00000438462 LINC00862A6NCI5 91 aa4.83□□□□□ -1.64
RTN4-211ENST00000438462 C5orf52A6NGY3 159 aa4.83□□□□□ -1.64
RTN4-211ENST00000438462 NPYP01303 97 aa4.83□□□□□ -1.64
RTN4-211ENST00000438462 AKR1D1P51857 326 aa4.83□□□□□ -1.64
RTN4-211ENST00000438462 FAM104BQ5XKR9 115 aa4.83□□□□□ -1.64
RTN4-211ENST00000438462 FAM213BQ8TBF2 198 aa4.83□□□□□ -1.64
RTN4-211ENST00000438462 MBD3L1Q8WWY6 194 aa4.83□□□□□ -1.64
RTN4-211ENST00000438462 CYSLTR1Q9Y271 337 aa4.83□□□□□ -1.64
RTN4-211ENST00000438462 D6R8Y8 96 aa4.82□□□□□ -1.64
RTN4-211ENST00000438462 GNG13Q9P2W3 67 aa4.82□□□□□ -1.64
RTN4-211ENST00000438462 MANBALQ9NQG1 85 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms