RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 IGKV2D-24A0A075B6R9 120 aa17.11■□□□□ 0.33
CPNE1-216ENST00000437340 NHLRC4P0CG21 123 aaPredicted RBP17.11■□□□□ 0.33
CPNE1-216ENST00000437340 STAB2Q8WWQ8 2551 aa17.1■□□□□ 0.33
CPNE1-216ENST00000437340 F8WDY8 70 aa17.1■□□□□ 0.33
CPNE1-216ENST00000437340 FAM218AQ96MZ4 157 aa17.1■□□□□ 0.33
CPNE1-216ENST00000437340 CAMK2N2Q96S95 79 aa17.1■□□□□ 0.33
CPNE1-216ENST00000437340 TMEM126AQ9H061 195 aa17.1■□□□□ 0.33
CPNE1-216ENST00000437340 HIGD2BQ4VC39 106 aa17.09■□□□□ 0.33
CPNE1-216ENST00000437340 UPK3BQ9BT76 320 aa17.09■□□□□ 0.33
CPNE1-216ENST00000437340 PRR3P79522 188 aaKnown RBP17.06■□□□□ 0.32
CPNE1-216ENST00000437340 Q8NDZ9 215 aa17.03■□□□□ 0.32
CPNE1-216ENST00000437340 Q9HAA7 133 aa17.03■□□□□ 0.32
CPNE1-216ENST00000437340 TEX49A0A1B0GTD5 131 aa17.02■□□□□ 0.32
CPNE1-216ENST00000437340 Q6ZRU5 148 aa17.01■□□□□ 0.31
CPNE1-216ENST00000437340 RMI2Q96E14 147 aa17■□□□□ 0.31
CPNE1-216ENST00000437340 A0A087WYN8 130 aa17■□□□□ 0.31
CPNE1-216ENST00000437340 NCR3O14931 201 aa17■□□□□ 0.31
CPNE1-216ENST00000437340 BAALC-AS2P0C853 105 aa17■□□□□ 0.31
CPNE1-216ENST00000437340 DNAL4O96015 105 aa16.99■□□□□ 0.31
CPNE1-216ENST00000437340 S100A7L2Q5SY68 101 aa16.99■□□□□ 0.31
CPNE1-216ENST00000437340 A0A1B0GX51 115 aa16.97■□□□□ 0.31
CPNE1-216ENST00000437340 NDUFC2-KCTD14E9PQ53 114 aa16.97■□□□□ 0.31
CPNE1-216ENST00000437340 SYCNQ0VAF6 134 aa16.95■□□□□ 0.3
CPNE1-216ENST00000437340 IGLV6-57P01721 117 aa16.94■□□□□ 0.3
CPNE1-216ENST00000437340 XAGE1AQ9HD64 81 aa16.94■□□□□ 0.3
CPNE1-216ENST00000437340 SIGMAR1Q99720 223 aa16.94■□□□□ 0.3
CPNE1-216ENST00000437340 CDIP1Q9H305 208 aa16.94■□□□□ 0.3
CPNE1-216ENST00000437340 FBN3Q75N90 2809 aa16.94■□□□□ 0.3
CPNE1-216ENST00000437340 LECT2O14960 151 aa16.93■□□□□ 0.3
CPNE1-216ENST00000437340 DNAH7Q8WXX0 4024 aa16.92■□□□□ 0.3
CPNE1-216ENST00000437340 RPL18AQ02543 176 aaKnown RBP16.91■□□□□ 0.3
CPNE1-216ENST00000437340 DYNC2H1Q8NCM8 4307 aaKnown RBP16.91■□□□□ 0.3
CPNE1-216ENST00000437340 C22orf24Q9Y442 160 aa16.89■□□□□ 0.3
CPNE1-216ENST00000437340 DNAH1Q9P2D7 4330 aa16.88■□□□□ 0.29
CPNE1-216ENST00000437340 C6orf99Q4VX62 202 aa16.88■□□□□ 0.29
CPNE1-216ENST00000437340 LINC00167Q96N53 147 aa16.88■□□□□ 0.29
CPNE1-216ENST00000437340 APLNQ9ULZ1 77 aa16.88■□□□□ 0.29
CPNE1-216ENST00000437340 VPREB1P12018 145 aa16.87■□□□□ 0.29
CPNE1-216ENST00000437340 CSMD3Q7Z407 3707 aa16.87■□□□□ 0.29
CPNE1-216ENST00000437340 USP17L23D6RBM5 183 aa16.87■□□□□ 0.29
CPNE1-216ENST00000437340 SNCGO76070 127 aa16.85■□□□□ 0.29
CPNE1-216ENST00000437340 Q6ZRP5 223 aa16.85■□□□□ 0.29
CPNE1-216ENST00000437340 Q8N814 137 aa16.85■□□□□ 0.29
CPNE1-216ENST00000437340 TLX1NBP0CAT3 122 aa16.84■□□□□ 0.29
CPNE1-216ENST00000437340 FAM240AA0A1B0GVK7 77 aa16.84■□□□□ 0.29
CPNE1-216ENST00000437340 PCP4P48539 62 aa16.84■□□□□ 0.29
CPNE1-216ENST00000437340 ORMDL1Q9P0S3 153 aa16.84■□□□□ 0.29
CPNE1-216ENST00000437340 TRBV10-3A0A0K0K1G6 114 aa16.83■□□□□ 0.28
CPNE1-216ENST00000437340 GAGE2EQ4V326 116 aa16.83■□□□□ 0.28
CPNE1-216ENST00000437340 GAGE2DQ9UEU5 116 aa16.83■□□□□ 0.28
CPNE1-216ENST00000437340 M0R378 163 aa16.82■□□□□ 0.28
CPNE1-216ENST00000437340 CASC10Q5T4H9 136 aa16.82■□□□□ 0.28
CPNE1-216ENST00000437340 INAFM2P0DMQ5 153 aa16.82■□□□□ 0.28
CPNE1-216ENST00000437340 TRAV23DV6A0A075B6W5 121 aa16.81■□□□□ 0.28
CPNE1-216ENST00000437340 LINC00575Q6W349 94 aa16.8■□□□□ 0.28
CPNE1-216ENST00000437340 UBE2DNLQ8IWF7 75 aa16.8■□□□□ 0.28
CPNE1-216ENST00000437340 SLPIP03973 132 aa16.78■□□□□ 0.28
CPNE1-216ENST00000437340 C9orf129Q5T035 196 aaKnown RBP16.77■□□□□ 0.28
CPNE1-216ENST00000437340 NUPR2A6NF83 97 aa16.77■□□□□ 0.27
CPNE1-216ENST00000437340 DIRC1Q969H9 104 aa16.77■□□□□ 0.27
CPNE1-216ENST00000437340 STARD9Q9P2P6 4700 aa16.76■□□□□ 0.27
CPNE1-216ENST00000437340 XGP55808 180 aa16.76■□□□□ 0.27
CPNE1-216ENST00000437340 OBSCN-AS1Q96MR7 158 aa16.76■□□□□ 0.27
CPNE1-216ENST00000437340 TRBV7-6A0A0J9YX20 115 aa16.75■□□□□ 0.27
CPNE1-216ENST00000437340 ACYP1P07311 99 aa16.75■□□□□ 0.27
CPNE1-216ENST00000437340 SCGB1A1P11684 91 aa16.75■□□□□ 0.27
CPNE1-216ENST00000437340 ZNF73O43830 326 aaPredicted RBP16.74■□□□□ 0.27
CPNE1-216ENST00000437340 KRTAP1-5Q9BYS1 174 aa16.74■□□□□ 0.27
CPNE1-216ENST00000437340 LYSTQ99698 3801 aa16.74■□□□□ 0.27
CPNE1-216ENST00000437340 PLA2G2DQ9UNK4 145 aa16.74■□□□□ 0.27
CPNE1-216ENST00000437340 PLECQ15149 4684 aaKnown RBP16.74■□□□□ 0.27
CPNE1-216ENST00000437340 hADV29S1A0JD25 119 aa16.73■□□□□ 0.27
CPNE1-216ENST00000437340 TMEM256-PLSCR3K7ERE1 68 aa16.73■□□□□ 0.27
CPNE1-216ENST00000437340 TGP01266 2768 aa16.71■□□□□ 0.27
CPNE1-216ENST00000437340 MT-ATP8P03928 68 aa16.71■□□□□ 0.27
CPNE1-216ENST00000437340 COX7BP24311 80 aa16.68■□□□□ 0.26
CPNE1-216ENST00000437340 NKAPP1Q8N9T2 125 aa16.68■□□□□ 0.26
CPNE1-216ENST00000437340 ELOF1P60002 83 aaKnown RBP16.67■□□□□ 0.26
CPNE1-216ENST00000437340 H3BQ85 93 aa16.66■□□□□ 0.26
CPNE1-216ENST00000437340 IGLV5-37A0A075B6J1 123 aa16.65■□□□□ 0.26
CPNE1-216ENST00000437340 JMJD7-PLA2G4BH0Y9G9 81 aa16.65■□□□□ 0.26
CPNE1-216ENST00000437340 LOC107984640A0A0U1RRK4 108 aa16.64■□□□□ 0.25
CPNE1-216ENST00000437340 SERTAD4-AS1Q5TG53 156 aa16.64■□□□□ 0.25
CPNE1-216ENST00000437340 PSCAO43653 123 aa16.64■□□□□ 0.25
CPNE1-216ENST00000437340 TTC32Q5I0X7 151 aa16.63■□□□□ 0.25
CPNE1-216ENST00000437340 C14orf132Q9NPU4 83 aa16.62■□□□□ 0.25
CPNE1-216ENST00000437340 KCNQ1DNQ9H478 68 aa16.61■□□□□ 0.25
CPNE1-216ENST00000437340 TENM2Q9NT68 2774 aa16.61■□□□□ 0.25
CPNE1-216ENST00000437340 CNBPP62633 177 aaKnown RBP16.61■□□□□ 0.25
CPNE1-216ENST00000437340 C7orf33Q8WU49 177 aa16.61■□□□□ 0.25
CPNE1-216ENST00000437340 C14orf177Q52M58 125 aa16.59■□□□□ 0.25
CPNE1-216ENST00000437340 GAGE2AQ6NT46 116 aa16.59■□□□□ 0.25
CPNE1-216ENST00000437340 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP16.59■□□□□ 0.25
CPNE1-216ENST00000437340 GHRHP01286 108 aa16.59■□□□□ 0.25
CPNE1-216ENST00000437340 GAGE2BQ13066 116 aa16.59■□□□□ 0.25
CPNE1-216ENST00000437340 Q6ZQY7 126 aa16.58■□□□□ 0.24
CPNE1-216ENST00000437340 NBDYA0A0U1RRE5 68 aa16.57■□□□□ 0.24
CPNE1-216ENST00000437340 LINC00528Q8N1L1 170 aa16.57■□□□□ 0.24
CPNE1-216ENST00000437340 WWC2-AS2Q96NR7 200 aa16.57■□□□□ 0.24
CPNE1-216ENST00000437340 SDIM1Q6ZPB5 146 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms