RNA–Protein interactions for RNA: ENST00000436978.5

PTPN13-204, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PTPN13, Length 8,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-204ENST00000436978 CENPFP49454 3210 aa10.93□□□□□ -0.66
PTPN13-204ENST00000436978 LINC00315P59091 139 aa10.93□□□□□ -0.66
PTPN13-204ENST00000436978 ELOF1P60002 83 aaKnown RBP10.92□□□□□ -0.66
PTPN13-204ENST00000436978 NBDYA0A0U1RRE5 68 aa10.92□□□□□ -0.66
PTPN13-204ENST00000436978 RTL8CO15255 209 aa10.92□□□□□ -0.66
PTPN13-204ENST00000436978 KRTAP24-1Q3LI83 254 aa10.91□□□□□ -0.66
PTPN13-204ENST00000436978 SETD2Q9BYW2 2564 aaPredicted RBP10.91□□□□□ -0.66
PTPN13-204ENST00000436978 TMEM254Q8TBM7 123 aa10.91□□□□□ -0.66
PTPN13-204ENST00000436978 LINC00846Q9NV44 126 aa10.91□□□□□ -0.66
PTPN13-204ENST00000436978 C7orf65Q6ZTY9 151 aa10.91□□□□□ -0.66
PTPN13-204ENST00000436978 Q8NAQ8 132 aa10.91□□□□□ -0.66
PTPN13-204ENST00000436978 Q6ZRP5 223 aa10.9□□□□□ -0.66
PTPN13-204ENST00000436978 GVQW2A0A096LPI5 108 aaPredicted RBP10.9□□□□□ -0.66
PTPN13-204ENST00000436978 C1orf64Q8NEQ6 169 aa10.9□□□□□ -0.66
PTPN13-204ENST00000436978 CEP295Q9C0D2 2601 aa10.9□□□□□ -0.66
PTPN13-204ENST00000436978 Q8NBF4 154 aa10.89□□□□□ -0.67
PTPN13-204ENST00000436978 Q6ZRX8 168 aa10.88□□□□□ -0.67
PTPN13-204ENST00000436978 SPATA3Q8NHX4 192 aa10.88□□□□□ -0.67
PTPN13-204ENST00000436978 KLK9Q2XQG4 91 aa10.87□□□□□ -0.67
PTPN13-204ENST00000436978 SPINK1P00995 79 aa10.87□□□□□ -0.67
PTPN13-204ENST00000436978 SPACA4Q8TDM5 124 aa10.87□□□□□ -0.67
PTPN13-204ENST00000436978 IGKV2D-30A0A075B6S6 120 aa10.86□□□□□ -0.67
PTPN13-204ENST00000436978 IGKV2-30P06310 120 aa10.86□□□□□ -0.67
PTPN13-204ENST00000436978 DNAH10OSP0CZ25 163 aa10.85□□□□□ -0.67
PTPN13-204ENST00000436978 CHD8Q9HCK8 2581 aa10.85□□□□□ -0.67
PTPN13-204ENST00000436978 USP9YO00507 2555 aaPredicted RBP10.85□□□□□ -0.67
PTPN13-204ENST00000436978 C1orf195Q5TG92 126 aa10.85□□□□□ -0.67
PTPN13-204ENST00000436978 LINC00588Q9Y4M8 146 aa10.85□□□□□ -0.67
PTPN13-204ENST00000436978 LOC110117498A0A087WWA1 95 aa10.84□□□□□ -0.67
PTPN13-204ENST00000436978 CRYGAP11844 174 aa10.84□□□□□ -0.67
PTPN13-204ENST00000436978 ACYP2P14621 99 aa10.83□□□□□ -0.68
PTPN13-204ENST00000436978 WWC2-AS2Q96NR7 200 aa10.83□□□□□ -0.68
PTPN13-204ENST00000436978 TYMSOSQ8TAI1 123 aa10.83□□□□□ -0.68
PTPN13-204ENST00000436978 PLA2G1BP04054 148 aaKnown RBP10.82□□□□□ -0.68
PTPN13-204ENST00000436978 SMIM29Q86T20 159 aa10.82□□□□□ -0.68
PTPN13-204ENST00000436978 BCE1O60756 84 aa10.82□□□□□ -0.68
PTPN13-204ENST00000436978 SOSTDC1Q6X4U4 206 aa10.82□□□□□ -0.68
PTPN13-204ENST00000436978 PMAIP1Q13794 54 aa10.82□□□□□ -0.68
PTPN13-204ENST00000436978 LINC00313P59037 77 aa10.82□□□□□ -0.68
PTPN13-204ENST00000436978 PHF5AQ7RTV0 110 aaKnown RBP10.82□□□□□ -0.68
PTPN13-204ENST00000436978 EPM2AB3EWF7 344 aa10.81□□□□□ -0.68
PTPN13-204ENST00000436978 ZNF462Q96JM2 2506 aa10.81□□□□□ -0.68
PTPN13-204ENST00000436978 GOLGB1Q14789 3259 aaKnown RBP10.81□□□□□ -0.68
PTPN13-204ENST00000436978 H3BPC8 53 aa10.8□□□□□ -0.68
PTPN13-204ENST00000436978 LINC00476Q8WZB0 136 aa10.79□□□□□ -0.68
PTPN13-204ENST00000436978 PKD1L2Q7Z442 2459 aa10.79□□□□□ -0.68
PTPN13-204ENST00000436978 PSPHP1O15172 72 aa10.78□□□□□ -0.68
PTPN13-204ENST00000436978 Q6ZQT0 140 aa10.77□□□□□ -0.68
PTPN13-204ENST00000436978 CHTF8P0CG12 524 aa10.76□□□□□ -0.69
PTPN13-204ENST00000436978 MTORP42345 2549 aa10.74□□□□□ -0.69
PTPN13-204ENST00000436978 A0A1B0GU69 56 aa10.73□□□□□ -0.69
PTPN13-204ENST00000436978 IGLV6-57P01721 117 aa10.72□□□□□ -0.69
PTPN13-204ENST00000436978 RPL37AP61513 92 aaKnown RBP10.72□□□□□ -0.69
PTPN13-204ENST00000436978 F8P00451 2351 aa10.72□□□□□ -0.69
PTPN13-204ENST00000436978 CDIP1Q9H305 208 aa10.72□□□□□ -0.69
PTPN13-204ENST00000436978 FAM218AQ96MZ4 157 aa10.72□□□□□ -0.69
PTPN13-204ENST00000436978 TRBV7-4A0A0J9YYF1 115 aa10.71□□□□□ -0.7
PTPN13-204ENST00000436978 CSNK1G2-AS1Q8NCQ2 148 aa10.71□□□□□ -0.7
PTPN13-204ENST00000436978 TRAV22A0A0B4J277 110 aa10.7□□□□□ -0.7
PTPN13-204ENST00000436978 C8orf87E5RJ46 101 aa10.69□□□□□ -0.7
PTPN13-204ENST00000436978 ACANP16112 2415 aa10.68□□□□□ -0.7
PTPN13-204ENST00000436978 ATP11AUNQ6ZP68 121 aa10.67□□□□□ -0.7
PTPN13-204ENST00000436978 Q9UF83 564 aa10.67□□□□□ -0.7
PTPN13-204ENST00000436978 A8MWP4 228 aa10.64□□□□□ -0.71
PTPN13-204ENST00000436978 Q96NJ1 140 aa10.64□□□□□ -0.71
PTPN13-204ENST00000436978 KRTAP10-11P60412 298 aa10.64□□□□□ -0.71
PTPN13-204ENST00000436978 VPREB1P12018 145 aa10.63□□□□□ -0.71
PTPN13-204ENST00000436978 ST20-AS1Q8NBB2 130 aa10.63□□□□□ -0.71
PTPN13-204ENST00000436978 CR1P17927 2039 aa10.63□□□□□ -0.71
PTPN13-204ENST00000436978 LOC101927531A0A1B0GV80 90 aa10.62□□□□□ -0.71
PTPN13-204ENST00000436978 DNAH12Q6ZR08 3092 aa10.62□□□□□ -0.71
PTPN13-204ENST00000436978 FAM168BA1KXE4 195 aa10.62□□□□□ -0.71
PTPN13-204ENST00000436978 C19orf73Q9NVV2 129 aa10.62□□□□□ -0.71
PTPN13-204ENST00000436978 J3QL48 77 aa10.61□□□□□ -0.71
PTPN13-204ENST00000436978 FASNP49327 2511 aaKnown RBP10.61□□□□□ -0.71
PTPN13-204ENST00000436978 KCNQ1DNQ9H478 68 aa10.61□□□□□ -0.71
PTPN13-204ENST00000436978 SMCPP49901 116 aaPredicted RBP10.61□□□□□ -0.71
PTPN13-204ENST00000436978 K7EIL1 84 aa10.6□□□□□ -0.71
PTPN13-204ENST00000436978 PRO0461Q9UI25 63 aa10.6□□□□□ -0.71
PTPN13-204ENST00000436978 POLQO75417 2590 aa10.6□□□□□ -0.71
PTPN13-204ENST00000436978 IGLV1-50A0A075B6I6 118 aa10.6□□□□□ -0.71
PTPN13-204ENST00000436978 LITAFQ99732 161 aa10.58□□□□□ -0.72
PTPN13-204ENST00000436978 A0A096LNT2 108 aa10.57□□□□□ -0.72
PTPN13-204ENST00000436978 SERTAD4-AS1Q5TG53 156 aa10.56□□□□□ -0.72
PTPN13-204ENST00000436978 PRR34Q9NV39 138 aa10.56□□□□□ -0.72
PTPN13-204ENST00000436978 SPAG11AQ6PDA7 123 aa10.56□□□□□ -0.72
PTPN13-204ENST00000436978 PLA2G2DQ9UNK4 145 aa10.55□□□□□ -0.72
PTPN13-204ENST00000436978 ERC2-IT1O76042 136 aa10.53□□□□□ -0.72
PTPN13-204ENST00000436978 MRPL34Q9BQ48 92 aaKnown RBP10.53□□□□□ -0.72
PTPN13-204ENST00000436978 LINC00304Q8N9R0 145 aa10.53□□□□□ -0.72
PTPN13-204ENST00000436978 RPS28P62857 69 aaKnown RBP10.52□□□□□ -0.73
PTPN13-204ENST00000436978 C15orf56Q8N910 161 aa10.52□□□□□ -0.73
PTPN13-204ENST00000436978 TLX1NBP0CAT3 122 aa10.52□□□□□ -0.73
PTPN13-204ENST00000436978 ZNF861PO60384 105 aa10.51□□□□□ -0.73
PTPN13-204ENST00000436978 PRRC2CQ9Y520 2896 aaKnown RBP10.51□□□□□ -0.73
PTPN13-204ENST00000436978 TM2D3Q9BRN9 247 aa10.51□□□□□ -0.73
PTPN13-204ENST00000436978 LINC00612Q8N6U2 182 aa10.5□□□□□ -0.73
PTPN13-204ENST00000436978 LINC00336Q6ZUF6 198 aa10.49□□□□□ -0.73
PTPN13-204ENST00000436978 LINC00528Q8N1L1 170 aa10.49□□□□□ -0.73
PTPN13-204ENST00000436978 SSBP3-AS1Q7Z2R9 100 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 107.2 ms