RNA–Protein interactions for RNA: ENST00000436786.1

LINC01239-202, Transcript of long intergenic non-protein coding RNA 1239, humanhuman

TSL 2 BASIC

Gene LINC01239, Length 2,347 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01239-202ENST00000436786 UBE2D4Q9Y2X8 147 aa2.69□□□□□ -1.98
LINC01239-202ENST00000436786 FAM168BA1KXE4 195 aa2.68□□□□□ -1.98
LINC01239-202ENST00000436786 IGLV7-43P04211 117 aa2.68□□□□□ -1.98
LINC01239-202ENST00000436786 PMCHL1Q16048 86 aa2.68□□□□□ -1.98
LINC01239-202ENST00000436786 MRPL54Q6P161 138 aaKnown RBP2.68□□□□□ -1.98
LINC01239-202ENST00000436786 KRTAP11-1Q8IUC1 163 aa2.68□□□□□ -1.98
LINC01239-202ENST00000436786 TRAPPC1Q9Y5R8 145 aa2.68□□□□□ -1.98
LINC01239-202ENST00000436786 C9orf118A6NHY6 69 aa2.68□□□□□ -1.98
LINC01239-202ENST00000436786 SUMO2P61956 95 aaKnown RBP2.68□□□□□ -1.98
LINC01239-202ENST00000436786 SPAG11BQ08648 103 aa2.68□□□□□ -1.98
LINC01239-202ENST00000436786 RIGQ13278 110 aa2.68□□□□□ -1.98
LINC01239-202ENST00000436786 C10orf25Q5T742 122 aa2.68□□□□□ -1.98
LINC01239-202ENST00000436786 LCE1EQ5T753 118 aa2.68□□□□□ -1.98
LINC01239-202ENST00000436786 Q6ZUT4 128 aa2.68□□□□□ -1.98
LINC01239-202ENST00000436786 DIRC1Q969H9 104 aa2.68□□□□□ -1.98
LINC01239-202ENST00000436786 FAM104AQ969W3 186 aa2.68□□□□□ -1.98
LINC01239-202ENST00000436786 SMIM7Q9BQ49 75 aa2.68□□□□□ -1.98
LINC01239-202ENST00000436786 TIMM21Q9BVV7 248 aa2.68□□□□□ -1.98
LINC01239-202ENST00000436786 TMEM126AQ9H061 195 aa2.68□□□□□ -1.98
LINC01239-202ENST00000436786 OSTCQ9NRP0 149 aa2.68□□□□□ -1.98
LINC01239-202ENST00000436786 A0A087WZ39 114 aa2.67□□□□□ -1.98
LINC01239-202ENST00000436786 A6NDN8 102 aa2.67□□□□□ -1.98
LINC01239-202ENST00000436786 PPP1R17O96001 155 aa2.67□□□□□ -1.98
LINC01239-202ENST00000436786 MRPL51Q4U2R6 128 aaKnown RBP2.67□□□□□ -1.98
LINC01239-202ENST00000436786 BAGE3Q86Y29 109 aa2.67□□□□□ -1.98
LINC01239-202ENST00000436786 KIR2DL4Q99706 377 aa2.67□□□□□ -1.98
LINC01239-202ENST00000436786 V9GYV3 84 aa2.67□□□□□ -1.98
LINC01239-202ENST00000436786 H0Y9J4 135 aa2.67□□□□□ -1.98
LINC01239-202ENST00000436786 H3BRM9 83 aa2.67□□□□□ -1.98
LINC01239-202ENST00000436786 H3BUT2 72 aa2.67□□□□□ -1.98
LINC01239-202ENST00000436786 SERF1AO75920 110 aa2.67□□□□□ -1.98
LINC01239-202ENST00000436786 RPL39P62891 51 aaKnown RBP2.67□□□□□ -1.98
LINC01239-202ENST00000436786 SEC11AP67812 179 aa2.67□□□□□ -1.98
LINC01239-202ENST00000436786 KRTAP5-4Q6L8H1 288 aa2.67□□□□□ -1.98
LINC01239-202ENST00000436786 UNQ6190/PRO20217Q6UXQ8 127 aa2.67□□□□□ -1.98
LINC01239-202ENST00000436786 FAM19A5Q7Z5A7 132 aaPredicted RBP2.67□□□□□ -1.98
LINC01239-202ENST00000436786 KRTAP7-1Q8IUC3 87 aa2.67□□□□□ -1.98
LINC01239-202ENST00000436786 OR13C6PQ8NH95 151 aa2.67□□□□□ -1.98
LINC01239-202ENST00000436786 MRPL35Q9NZE8 188 aaKnown RBP2.67□□□□□ -1.98
LINC01239-202ENST00000436786 SPCS1Q9Y6A9 102 aa2.67□□□□□ -1.98
LINC01239-202ENST00000436786 IGHV3OR16-9A0A0B4J2B5 98 aa2.66□□□□□ -1.98
LINC01239-202ENST00000436786 CCDC179H3BU77 68 aa2.66□□□□□ -1.98
LINC01239-202ENST00000436786 NDUFA1O15239 70 aa2.66□□□□□ -1.98
LINC01239-202ENST00000436786 GAGE2EQ4V326 116 aa2.66□□□□□ -1.98
LINC01239-202ENST00000436786 FAM104BQ5XKR9 115 aa2.66□□□□□ -1.98
LINC01239-202ENST00000436786 ATOH7Q8N100 152 aa2.66□□□□□ -1.98
LINC01239-202ENST00000436786 C20orf78Q9BR46 151 aa2.66□□□□□ -1.98
LINC01239-202ENST00000436786 SPANXB1Q9NS25 103 aaPredicted RBP2.66□□□□□ -1.98
LINC01239-202ENST00000436786 C6orf48Q9UBA6 75 aa2.66□□□□□ -1.98
LINC01239-202ENST00000436786 GAGE2DQ9UEU5 116 aa2.66□□□□□ -1.98
LINC01239-202ENST00000436786 MUC5BQ9HC84 5762 aaPredicted RBP2.66□□□□□ -1.98
LINC01239-202ENST00000436786 LPAP08519 4548 aa2.65□□□□□ -1.98
LINC01239-202ENST00000436786 F8W1H4 67 aa2.65□□□□□ -1.98
LINC01239-202ENST00000436786 MT-ATP8P03928 68 aa2.65□□□□□ -1.98
LINC01239-202ENST00000436786 KRTAP1-4P0C5Y4 121 aa2.65□□□□□ -1.98
LINC01239-202ENST00000436786 TLX1NBP0CAT3 122 aa2.65□□□□□ -1.98
LINC01239-202ENST00000436786 C3orf79P0CE67 100 aa2.65□□□□□ -1.98
LINC01239-202ENST00000436786 FABP2P12104 132 aa2.65□□□□□ -1.98
LINC01239-202ENST00000436786 SLC25A34Q6PIV7 304 aa2.65□□□□□ -1.98
LINC01239-202ENST00000436786 IGLV1-50A0A075B6I6 118 aa2.65□□□□□ -1.99
LINC01239-202ENST00000436786 A0A1W2PPM0 123 aa2.65□□□□□ -1.99
LINC01239-202ENST00000436786 SMIM27A0A1W2PRY6 76 aa2.65□□□□□ -1.99
LINC01239-202ENST00000436786 CKS2P33552 79 aa2.65□□□□□ -1.99
LINC01239-202ENST00000436786 RPL23P62829 140 aaKnown RBP2.65□□□□□ -1.99
LINC01239-202ENST00000436786 HBBP68871 147 aa2.65□□□□□ -1.99
LINC01239-202ENST00000436786 MRPS36P82909 103 aaKnown RBP2.65□□□□□ -1.99
LINC01239-202ENST00000436786 KIAA0087Q14695 138 aa2.65□□□□□ -1.99
LINC01239-202ENST00000436786 PRR4Q16378 134 aa2.65□□□□□ -1.99
LINC01239-202ENST00000436786 MEIG1Q5JSS6 88 aa2.65□□□□□ -1.99
LINC01239-202ENST00000436786 KRTAP5-1Q6L8H4 278 aa2.65□□□□□ -1.99
LINC01239-202ENST00000436786 MAP1LC3AQ9H492 121 aa2.65□□□□□ -1.99
LINC01239-202ENST00000436786 D6R8Y8 96 aa2.64□□□□□ -1.99
LINC01239-202ENST00000436786 NDUFV3P56181 108 aaKnown RBP2.64□□□□□ -1.99
LINC01239-202ENST00000436786 C2orf82Q6UX34 121 aa2.64□□□□□ -1.99
LINC01239-202ENST00000436786 C18orf32Q8TCD1 76 aa2.64□□□□□ -1.99
LINC01239-202ENST00000436786 SMIM2Q9BVW6 85 aa2.64□□□□□ -1.99
LINC01239-202ENST00000436786 CDIP1Q9H305 208 aa2.64□□□□□ -1.99
LINC01239-202ENST00000436786 C9JAW5 83 aa2.64□□□□□ -1.99
LINC01239-202ENST00000436786 NPYP01303 97 aa2.64□□□□□ -1.99
LINC01239-202ENST00000436786 UBE2D1P51668 147 aa2.64□□□□□ -1.99
LINC01239-202ENST00000436786 UBE2BP63146 152 aa2.64□□□□□ -1.99
LINC01239-202ENST00000436786 KRTAP15-1Q3LI76 137 aa2.64□□□□□ -1.99
LINC01239-202ENST00000436786 ETDBQ3ZM63 59 aa2.64□□□□□ -1.99
LINC01239-202ENST00000436786 C9orf129Q5T035 196 aaKnown RBP2.64□□□□□ -1.99
LINC01239-202ENST00000436786 LINC00242Q5T6M2 205 aa2.64□□□□□ -1.99
LINC01239-202ENST00000436786 V9GYY9 64 aa2.64□□□□□ -1.99
LINC01239-202ENST00000436786 TRBV20-1A0A075B6N2 111 aa2.63□□□□□ -1.99
LINC01239-202ENST00000436786 J3KT08 172 aa2.63□□□□□ -1.99
LINC01239-202ENST00000436786 TRBV30A0A0K0K1B3 111 aa2.63□□□□□ -1.99
LINC01239-202ENST00000436786 TINCRA0A1B0GVN0 87 aa2.63□□□□□ -1.99
LINC01239-202ENST00000436786 A0A1B0GXF2 115 aa2.63□□□□□ -1.99
LINC01239-202ENST00000436786 NDUFC2-KCTD14E9PQ53 114 aa2.63□□□□□ -1.99
LINC01239-202ENST00000436786 IFITM1P13164 125 aa2.63□□□□□ -1.99
LINC01239-202ENST00000436786 RPL13AP40429 203 aaKnown RBP2.63□□□□□ -1.99
LINC01239-202ENST00000436786 IGLV4-3A0A075B6K6 122 aa2.62□□□□□ -1.99
LINC01239-202ENST00000436786 ZNF861PO60384 105 aa2.62□□□□□ -1.99
LINC01239-202ENST00000436786 IFI27P40305 119 aaPredicted RBP2.62□□□□□ -1.99
LINC01239-202ENST00000436786 RPS28P62857 69 aaKnown RBP2.62□□□□□ -1.99
LINC01239-202ENST00000436786 ZC2HC1BQ5TFG8 222 aa2.62□□□□□ -1.99
LINC01239-202ENST00000436786 RAB37Q96AX2 223 aa2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms